Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o24r
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.43 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   3.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   9.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   9.3  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 311 IVRTPGGRLVYQYVKKPKKI 252
           + +  G RLVYQ+V  PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 388 QKA*KWCSGLHSGDDC 341
           QKA   C G+  GD+C
Sbjct: 109 QKAISECKGIAKGDNC 124


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 237 LTTPWDLLGLFYILI 281
           +TTPWD   +++ L+
Sbjct: 168 ITTPWDYYYIYHTLV 182


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 237 LTTPWDLLGLFYILI 281
           +TTPWD   +++ L+
Sbjct: 183 ITTPWDYYYIYHTLV 197


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 237 LTTPWDLLGLFYILI 281
           +TTPWD   +++ L+
Sbjct: 71  ITTPWDYYYIYHTLV 85


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -1

Query: 186 PSLLP*ENSETCLWWC 139
           P ++  +  +TC W C
Sbjct: 455 PGMIKKQQGDTCCWVC 470


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 272 HTDKPSGHP 298
           HT  P+GHP
Sbjct: 124 HTPTPNGHP 132


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -1

Query: 186 PSLLP*ENSETCLWWC 139
           P ++  +  +TC W C
Sbjct: 545 PGMIKKQQGDTCCWVC 560


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,749
Number of Sequences: 438
Number of extensions: 2433
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)