Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o24f
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   3.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.2  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   8.2  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 290 QRIVRAFLIEEQKNCEGPQGTT 355
           Q + R  L++ QKN + P G T
Sbjct: 469 QHVTRVRLVQFQKNTDEPMGIT 490


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 RVYGGVLCHKCVKQ 292
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 214 FSRSSWLDTTEFALALTTP 158
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,904
Number of Sequences: 2352
Number of extensions: 9242
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)