Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o24f
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   169   2e-42
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   169   2e-42
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   169   2e-42
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   168   3e-42
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   168   3e-42
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   165   3e-41
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    31   0.68 
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    30   1.2  
BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p pro...    29   3.6  
BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p pro...    29   3.6  
BT022731-1|AAY55147.1|  196|Drosophila melanogaster RH43586p pro...    28   6.3  
AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p pro...    28   6.3  
AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-P...    28   6.3  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  169 bits (410), Expect = 2e-42
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  169 bits (410), Expect = 2e-42
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  169 bits (410), Expect = 2e-42
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  168 bits (408), Expect = 3e-42
 Identities = 76/99 (76%), Positives = 85/99 (85%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  168 bits (408), Expect = 3e-42
 Identities = 76/99 (76%), Positives = 85/99 (85%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  165 bits (400), Expect = 3e-41
 Identities = 75/99 (75%), Positives = 84/99 (84%)
 Frame = +2

Query: 32  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 211
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI  +RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60

Query: 212 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK 328
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQK 99


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 194 GYHG-VCSCTDHTLGSSWAFLHTD 126
           GY G +C  +DH  GSSW +L TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 101 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLC-YRKKTVKRVYGGVLCH 277
           + P G L+Y  + KP  + RC  C       + A P +R+     RK   ++    V  H
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWNRKTQEQVKPH 174

Query: 278 KC 283
           +C
Sbjct: 175 RC 176


>BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p
           protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +2

Query: 14  LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 193
           LS ++K         +LSY TKSN   +++ P        VK  KK+ +  +CK + R +
Sbjct: 65  LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118

Query: 194 QPARPAERSRLCYRKK 241
           +  +  ++ +   +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134


>BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p
           protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +2

Query: 14  LSKSLKMVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 193
           LS ++K         +LSY TKSN   +++ P        VK  KK+ +  +CK + R +
Sbjct: 65  LSNNIKNFNNNEKIMQLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKV 118

Query: 194 QPARPAERSRLCYRKK 241
           +  +  ++ +   +KK
Sbjct: 119 EKKKKKKKKKKKKKKK 134


>BT022731-1|AAY55147.1|  196|Drosophila melanogaster RH43586p
           protein.
          Length = 196

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 173 KSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKNCEGPQG 349
           +++L G+QP  PAE     + +K   R     L H+  +Q    A L+E+Q  C G  G
Sbjct: 27  RAELLGLQPPDPAE-----FERKRQAR-----LEHELAEQEAAEAVLLEQQDECLGNVG 75


>AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 110 GGRLVYQYVKKPKKIPRCGQC 172
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-PA
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 110 GGRLVYQYVKKPKKIPRCGQC 172
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,799,901
Number of Sequences: 53049
Number of extensions: 401388
Number of successful extensions: 1321
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)