Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o24f
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.48 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   0.64 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   3.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   3.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.4  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 95  IVRTPGGRLVYQYVKKPKKI 154
           + +  G RLVYQ+V  PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 421 GFYLNLSPKIHFVAFFADLVLACCALRTFTIFLFFNEEGSDNAL 290
           G Y  + P IHF   FAD       ++ +  + FF +  S NA+
Sbjct: 452 GDYFFICPSIHFAQLFADR-----GMKVY--YYFFTQRTSTNAM 488


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 421 GFYLNLSPKIHFVAFFAD 368
           G Y  + P IHF   FAD
Sbjct: 452 GDYFFICPSIHFAQLFAD 469


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  QKA*KWCSGLHSGDDC 65
           QKA   C G+  GD+C
Sbjct: 109 QKAISECKGIAKGDNC 124


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 169 LTTPWDLLGLFYILI 125
           +TTPWD   +++ L+
Sbjct: 168 ITTPWDYYYIYHTLV 182


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 169 LTTPWDLLGLFYILI 125
           +TTPWD   +++ L+
Sbjct: 183 ITTPWDYYYIYHTLV 197


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 169 LTTPWDLLGLFYILI 125
           +TTPWD   +++ L+
Sbjct: 71  ITTPWDYYYIYHTLV 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,846
Number of Sequences: 438
Number of extensions: 2518
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)