Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o23f
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.8  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 315 HRRYSHHPEHPTRADHLEHQPGHH 386
           H  + HH  HPT AD   +   H+
Sbjct: 503 HHHHHHHHHHPTAADLAGYHHQHN 526


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 330 HHPEHPTRADHLEHQPGHH 386
           HHP     ++HL   P HH
Sbjct: 95  HHPSSSPHSNHLLGGPNHH 113


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 330 HHPEHPTRADHLEHQPGHH 386
           H  +HP  + H  H   HH
Sbjct: 173 HQQQHPGHSQHHHHHHHHH 191


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = +1

Query: 232  LVDTYEPIHVGPALVDVDNYEPISVGPAIVDTPTTQSTPLVQIILNINQATTASAVETPA 411
            LV  +  ++ GPA  D     P +V   +  T T   TP+   +     AT  S     A
Sbjct: 1075 LVSAFRQLY-GPAASDAIASIPAAVPLLLEVTTTVDHTPVTAAVAVAEAATATSPAAEVA 1133

Query: 412  YNPQPAEI 435
              P+ AE+
Sbjct: 1134 --PRIAEV 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,886
Number of Sequences: 2352
Number of extensions: 9835
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)