Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o20r
         (501 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   268   4e-72
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   268   4e-72
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   268   4e-72
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   268   4e-72
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   264   3e-71
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    92   3e-19
X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D. m...    28   8.2  
X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D. m...    28   8.2  
X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.      28   8.2  
M17211-1|AAA28417.1|  616|Drosophila melanogaster protein ( D.me...    28   8.2  
BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p pro...    28   8.2  
AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p pro...    28   8.2  
AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-P...    28   8.2  
AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-P...    28   8.2  
AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-P...    28   8.2  
AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-P...    28   8.2  
AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-P...    28   8.2  
AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA...    28   8.2  
AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA...    28   8.2  
AE013599-2123|AAS64847.1|  524|Drosophila melanogaster CG33464-P...    28   8.2  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  268 bits (656), Expect = 4e-72
 Identities = 122/139 (87%), Positives = 134/139 (96%)
 Frame = -2

Query: 440 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 261
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 260 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 81
           EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 80  RGMRHYWGLRVRGQHTKTT 24
           RG+RHYWGLRVRGQHTKTT
Sbjct: 121 RGLRHYWGLRVRGQHTKTT 139


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  268 bits (656), Expect = 4e-72
 Identities = 122/139 (87%), Positives = 134/139 (96%)
 Frame = -2

Query: 440 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 261
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 260 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 81
           EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 80  RGMRHYWGLRVRGQHTKTT 24
           RG+RHYWGLRVRGQHTKTT
Sbjct: 121 RGLRHYWGLRVRGQHTKTT 139


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  268 bits (656), Expect = 4e-72
 Identities = 122/139 (87%), Positives = 134/139 (96%)
 Frame = -2

Query: 440 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 261
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 260 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 81
           EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 80  RGMRHYWGLRVRGQHTKTT 24
           RG+RHYWGLRVRGQHTKTT
Sbjct: 121 RGLRHYWGLRVRGQHTKTT 139


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  268 bits (656), Expect = 4e-72
 Identities = 122/139 (87%), Positives = 134/139 (96%)
 Frame = -2

Query: 440 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 261
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 260 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 81
           EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 80  RGMRHYWGLRVRGQHTKTT 24
           RG+RHYWGLRVRGQHTKTT
Sbjct: 121 RGLRHYWGLRVRGQHTKTT 139


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  264 bits (648), Expect = 3e-71
 Identities = 121/139 (87%), Positives = 133/139 (95%)
 Frame = -2

Query: 440 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 261
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 260 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 81
           EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 80  RGMRHYWGLRVRGQHTKTT 24
           RG+RHYWGLRVRGQHTKTT
Sbjct: 121 RGLRHYWGLRVRGQHTKTT 139


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = -2

Query: 344 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 201
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D.
           melanogaster (latepopul.) Shaker ShB mRNA for put.
           K(+)-channel.).
          Length = 643

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 267 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 325

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 326 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 363


>X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D.
           melanogaster adultShaker ShA mRNA for put. K(+)-channel.
           ).
          Length = 616

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>M17211-1|AAA28417.1|  616|Drosophila melanogaster protein (
           D.melanogaster potassiumchannel (Shaker) mRNA, complete
           cds. ).
          Length = 616

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p
           protein.
          Length = 447

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 150 LAVFTINNILLPI*EPVWYLILPRIRHDSD 239
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDD 266


>AY069030-1|AAL39175.1|  433|Drosophila melanogaster GH01429p
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 191 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 102
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-PE,
           isoform E protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-PC,
           isoform C protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 267 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 325

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 326 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 363


>AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-PG,
           isoform G protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-PB,
           isoform B protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375


>AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-PD,
           isoform D protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 494 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 315
           FF+   LC+      LT   L  P+K      +MN  ID    + + +T    V      
Sbjct: 234 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 292

Query: 314 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 204
           + L KA +   DK + +     + ++I ++   R +K+
Sbjct: 293 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 330


>AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA
           protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 150 LAVFTINNILLPI*EPVWYLILPRIRHDSD 239
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDD 273


>AE014297-2410|AAF55469.1|  433|Drosophila melanogaster CG7379-PA
           protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 191 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 102
           +N  ++I+DGK  QL +   +  L+ED +R
Sbjct: 97  VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126


>AE013599-2123|AAS64847.1|  524|Drosophila melanogaster CG33464-PA
           protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 116 EDLERLKKIRAHRGMRHYWGLRVRGQHTKTTWQE 15
           EDLERL++++ + G RH+   R R +H + + +E
Sbjct: 453 EDLERLQRLQENGGRRHH---RARHRHRQQSEEE 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,681,970
Number of Sequences: 53049
Number of extensions: 498410
Number of successful extensions: 1447
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)