Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o18r
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    20   9.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   9.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 329 YGTTTRASRKLKIFTKVL 382
           +GTTT   R  K+  K+L
Sbjct: 61  FGTTTNLKRFYKVVEKIL 78


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 180 LYNKIK*VILTFILCQSKDDMKNRF 254
           +Y+ ++   + F LCQ+ DD+   F
Sbjct: 203 VYHLVEISEIHFDLCQAADDLNRYF 227


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 180 LYNKIK*VILTFILCQSKDDMKNRF 254
           +Y+ ++   + F LCQ+ DD+   F
Sbjct: 199 VYHLVEISEIHFDLCQAADDLNRYF 223


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 19  LFRKQLE*DSYYEYN 63
           ++RKQ E D  Y+Y+
Sbjct: 123 IYRKQYEIDDDYDYS 137


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 418 NSNQIYFWSLVC 453
           N+N+ Y+W  VC
Sbjct: 50  NTNRKYYWLNVC 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,722
Number of Sequences: 336
Number of extensions: 1382
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)