Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o18f
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ID75 Cluster: Putative uncharacterized protein PF13_0...    33   2.7  
UniRef50_Q4HN36 Cluster: Conserved hypothetical secreted protein...    32   8.3  

>UniRef50_Q8ID75 Cluster: Putative uncharacterized protein
           PF13_0333; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0333 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1024

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 392 IQHYIHNNYLIPVVYEISNNTIILYKLLIQ*ICF 493
           + +Y H +Y  P +Y+I N  + LYK L   IC+
Sbjct: 510 MDNYDHQSYNFPTLYDIKNYVVTLYKELYTHICY 543


>UniRef50_Q4HN36 Cluster: Conserved hypothetical secreted protein,
           putative; n=1; Campylobacter lari RM2100|Rep: Conserved
           hypothetical secreted protein, putative - Campylobacter
           lari RM2100
          Length = 492

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -3

Query: 416 SYYEYNVEYSELFGFQSQSYIKNSTQ 339
           SY E+N++YS+LFG+ SQ    N TQ
Sbjct: 53  SYDEFNLKYSQLFGYYSQLNNGNYTQ 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,895,317
Number of Sequences: 1657284
Number of extensions: 4963085
Number of successful extensions: 10921
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10919
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)