Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o17r
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 273 9e-74
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 273 1e-73
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 270 6e-73
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 268 2e-72
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 264 7e-71
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 160 1e-39
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 160 1e-39
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207 28 7.1
06_03_1221 - 28514952-28518152 28 7.1
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 28 7.1
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 273 bits (670), Expect = 9e-74
Identities = 129/183 (70%), Positives = 151/183 (82%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKVIHDNF I+EGLM VDGPS K WR GR A NIIP
Sbjct: 174 NASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIP 233
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+P LNGKLTGM+FRVP +VSVVDLTVR+ K ASY+AIK +K A+EG
Sbjct: 234 SSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEG 293
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGI+GY E+ +VS+DF+GDS SSIFDA AGI+LNDNFVKL++WYDNE+GYS+RVIDLI
Sbjct: 294 KLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLI 353
Query: 225 KYI 217
+++
Sbjct: 354 RHM 356
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 273 bits (669), Expect = 1e-73
Identities = 132/183 (72%), Positives = 150/183 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKVI+D F IVEGLM VDGPS K WR GR A NIIP
Sbjct: 199 NASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIP 258
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+PALNGKLTGMAFRVP +VSVVDLTVRL KPASY+ IK +KE +EG
Sbjct: 259 SSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEG 318
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGILGY E+ +VS+DF GD+ SSIFDA AGI+LNDNFVKL+SWYDNE+GYSSRV+DLI
Sbjct: 319 KLKGILGYVEEDLVSTDFQGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVVDLI 378
Query: 225 KYI 217
+++
Sbjct: 379 RHM 381
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 270 bits (663), Expect = 6e-73
Identities = 133/185 (71%), Positives = 150/185 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKVI+D F IVEGLM VDGPS K WR GR A NIIP
Sbjct: 170 NASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIP 229
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+PALNGKLTGMAFRVP +VSVVDLTVRL KPASY+ IK +KE AEG
Sbjct: 230 SSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEG 289
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGILGY E+ +VS+DF GDS SSIFDA AGI+L+D FVKL+SWYDNE+GYS+RVIDLI
Sbjct: 290 KLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALSDTFVKLVSWYDNEWGYSTRVIDLI 349
Query: 225 KYIQS 211
+++ S
Sbjct: 350 RHMHS 354
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 268 bits (658), Expect = 2e-72
Identities = 128/183 (69%), Positives = 149/183 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAK++H+ F I EGLM VDGPS K WR GRGA QNIIP
Sbjct: 226 NASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIP 285
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+PALNGKLTGMAFRVP NVSVVDLT RL K ASYE +K +KEA+EG
Sbjct: 286 SSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEG 345
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGILGYT++ VVS+DFIGD+ SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI
Sbjct: 346 SLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 405
Query: 225 KYI 217
++
Sbjct: 406 GHM 408
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 264 bits (646), Expect = 7e-71
Identities = 125/183 (68%), Positives = 148/183 (80%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKV+H+ F IVEGLM VDGPS K WR GRGA QNIIP
Sbjct: 285 NASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIP 344
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+P LNGKLTGMAFRVP NVSVVDLT R+ K ASY+ +K +K A+EG
Sbjct: 345 SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEG 404
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGILGYT++ VVS+DF+GD+ SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI
Sbjct: 405 ALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLI 464
Query: 225 KYI 217
++
Sbjct: 465 AHM 467
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 160 bits (388), Expect = 1e-39
Identities = 83/186 (44%), Positives = 110/186 (59%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAP K++ F I++G M +D L R R A NI+P
Sbjct: 216 NASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVP 274
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K E + Q +++A
Sbjct: 275 TSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAAN 334
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGIL + +VS DF S DA+ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 335 ELKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLA 394
Query: 225 KYIQSK 208
+ ++
Sbjct: 395 DIVANQ 400
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 160 bits (388), Expect = 1e-39
Identities = 85/187 (45%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAP K++ + F IV+G M +D L R R A NI+P
Sbjct: 228 NASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVP 286
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAE 409
STGAAKAV V+P L GKL G+A RVP NVSVVDL + K + + + ++AA
Sbjct: 287 TSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAA 346
Query: 408 GPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 229
GPL GIL + +VS DF SS DA+ + + D+ VK+++WYDNE+GYS RV+DL
Sbjct: 347 GPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 406
Query: 228 IKYIQSK 208
+ SK
Sbjct: 407 AHLVASK 413
>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
Length = 153
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 257 YSLSYQLISFTKLSFKEIPAAASKIEECESPMK 355
YSL + + TK FK+ K EEC +P K
Sbjct: 77 YSLVMKCLENTKNDFKKCKTLIDKYEECSNPPK 109
>06_03_1221 - 28514952-28518152
Length = 1066
Score = 28.3 bits (60), Expect = 7.1
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = -1
Query: 645 DGPSGKLWRDGRGAQQNIIP--ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 472
DG +LW GRG I P A+ A + +L+G+ + F +P N +VVD++
Sbjct: 72 DGAVTRLWLPGRGLGGTISPSIANLTALTYLNLSGNSLSGRFPDLLFALP--NATVVDVS 129
Query: 471 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAG-ISLN 298
S E V AA +G L V S+ G S+I++ +SLN
Sbjct: 130 Y---NRLSGELPNAPVAAAAATNARGSLSLQVLDVSSNLLAGRFPSAIWEHTPRLVSLN 185
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -1
Query: 603 QQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKV 424
QQ A+TG K V P +NG +GM + + +V + ++LG+ ++ + K +
Sbjct: 9 QQQTAAAATGVWKTVK---PFVNGGASGMLATCVIQPIDMVKVKIQLGEGSAAQVTKNML 65
Query: 423 KEAAEGPL-KGI 391
G KG+
Sbjct: 66 ANEGIGSFYKGL 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,174,090
Number of Sequences: 37544
Number of extensions: 351845
Number of successful extensions: 929
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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