Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o17r
(765 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 271 3e-73
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 268 3e-72
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 268 3e-72
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 266 1e-71
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 165 3e-41
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 163 2e-40
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 161 5e-40
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 0.84
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 3.4
At3g12685.1 68416.m01583 expressed protein contains Pfam domain,... 29 4.5
At1g74430.1 68414.m08623 myb family transcription factor (MYB95)... 28 5.9
At1g24350.1 68414.m03071 expressed protein contains Pfam domain,... 28 5.9
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 7.8
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 271 bits (665), Expect = 3e-73
Identities = 129/183 (70%), Positives = 151/183 (82%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKV+H+ F I+EGLM VDGPS K WR GRGA QNIIP
Sbjct: 233 NASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIP 292
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+P LNGKLTGMAFRVP +NVSVVDLT RL K ASYE +K +K A+EG
Sbjct: 293 SSTGAAKAVGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEG 352
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
PLKGILGYT++ VVS+DF+GDS SSIFDA AGI L+ +FVKL+SWYDNE+GYS+RV+DLI
Sbjct: 353 PLKGILGYTDEDVVSNDFVGDSRSSIFDANAGIGLSKSFVKLVSWYDNEWGYSNRVLDLI 412
Query: 225 KYI 217
+++
Sbjct: 413 EHM 415
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 268 bits (657), Expect = 3e-72
Identities = 130/183 (71%), Positives = 150/183 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKVI+D F IVEGLM VDGPS K WR GR A NIIP
Sbjct: 153 NASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIP 212
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+PALNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG
Sbjct: 213 SSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEG 272
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
LKGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI
Sbjct: 273 KLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLI 332
Query: 225 KYI 217
++
Sbjct: 333 VHM 335
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 268 bits (657), Expect = 3e-72
Identities = 128/183 (69%), Positives = 150/183 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKV+H+ F I+EGLM VDGPS K WR GRGA QNIIP
Sbjct: 231 NASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIP 290
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+P LNGKLTGMAFRVP NVSVVDLT RL K ASYE +K +K A+EG
Sbjct: 291 SSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEG 350
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
PL+GILGYTE+ VVS+DF+GDS SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI
Sbjct: 351 PLRGILGYTEEDVVSNDFLGDSRSSIFDANAGIGLSKSFMKLVSWYDNEWGYSNRVLDLI 410
Query: 225 KYI 217
+++
Sbjct: 411 EHM 413
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 266 bits (652), Expect = 1e-71
Identities = 128/183 (69%), Positives = 150/183 (81%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAPLAKVI+D F IVEGLM VDGPS K WR GR A NIIP
Sbjct: 153 NASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIP 212
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
+STGAAKAVGKV+P+LNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG
Sbjct: 213 SSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEG 272
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLI 226
+KGILGYTED VVS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI
Sbjct: 273 KMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLI 332
Query: 225 KYI 217
++
Sbjct: 333 VHM 335
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 165 bits (401), Expect = 3e-41
Identities = 86/187 (45%), Positives = 115/187 (61%), Gaps = 1/187 (0%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAP AKV+ + F IV+G M +D L R R A NI+P
Sbjct: 232 NASCTTNCLAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVP 290
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAE 409
STGAAKAV V+P L GKL G+A RVP NVSVVDL + + K + E + + ++AA
Sbjct: 291 TSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAAN 350
Query: 408 GPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 229
GP+KGIL + +VS DF S+ D++ + + D+ VK+++WYDNE+GYS RV+DL
Sbjct: 351 GPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 410
Query: 228 IKYIQSK 208
+ SK
Sbjct: 411 AHLVASK 417
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 163 bits (395), Expect = 2e-40
Identities = 85/179 (47%), Positives = 109/179 (60%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAP KV+ F I++G M +D L R R A NI+P
Sbjct: 213 NASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVP 271
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K E + ++AAE
Sbjct: 272 TSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEK 331
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 229
LKGIL ++ +VS DF SS D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 332 ELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 390
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 161 bits (391), Expect = 5e-40
Identities = 83/179 (46%), Positives = 109/179 (60%)
Frame = -1
Query: 765 NASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIP 586
NASCTTNCLAP KV+ F I++G M +D L R R A NI+P
Sbjct: 210 NASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVP 268
Query: 585 ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEG 406
STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K E + +++AE
Sbjct: 269 TSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEK 328
Query: 405 PLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 229
LKGIL ++ +VS DF S+ D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 329 ELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 257 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 388
Y +LISF + SFK A A + + +++ +TT +SV+P
Sbjct: 59 YKRRPELISFVEESFKAYRALAERYDHISKELQNANTTIASVFP 102
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 257 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 388
Y +LISF + S++ A A + + + +++ +TT +SV+P
Sbjct: 3 YKKRPELISFVEESYRAYRALAERYDHISTELQNANTTIASVFP 46
>At3g12685.1 68416.m01583 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 213
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = -1
Query: 576 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 397
G + VGK LN KLT A R V ++ G ++ +++ E PLK
Sbjct: 135 GVRREVGKHAKVLN-KLTANARRSEVMSLK--------GNESNKALTSEEISEEIAPPLK 185
Query: 396 GILGYTEDQVVSSDFIG 346
+G+TE +V++ G
Sbjct: 186 ESIGHTEVEVIAGALFG 202
>At1g74430.1 68414.m08623 myb family transcription factor (MYB95)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 271
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 514 CHSSQLAIKSRDNLTHSFGSTSRGRNDVLLSTTAITP*FSRRSINSFLCSSCG 672
C +LA K D +TH +T+ DV S+T +P S S + CSS G
Sbjct: 111 CLKKRLAKKGIDPMTHEPTTTTSLTVDVTSSSTTSSPTPSPTSSSFSSCSSTG 163
>At1g24350.1 68414.m03071 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 168
Score = 28.3 bits (60), Expect = 5.9
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Frame = -1
Query: 591 IPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVV--DLT-VRLGKPASYEAIKQKVK 421
+P+S A V L G F + + SVV D T VRL E + Q V
Sbjct: 61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVY 120
Query: 420 E-------AAEGPLKGILGYTEDQVVSSDFIGDS 340
E A PL+ +LG+T QVV+ +G +
Sbjct: 121 ELPAEHPLAESRPLRELLGHTPPQVVAGGMLGSA 154
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 435 KQKVKEAAEGPLKGILGYTE-DQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLIS 274
+++ KE E P+KG E + +V + IGD S+ + S N+N+ L S
Sbjct: 814 EEEEKEVLENPVKGEEEAREMETLVVEEDIGDETPSLTEIVENSSENENYTSLRS 868
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,538
Number of Sequences: 28952
Number of extensions: 281614
Number of successful extensions: 840
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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