Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o17f
(590 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 241 2e-64
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 240 6e-64
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 224 3e-59
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 223 5e-59
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 153 8e-38
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 148 3e-36
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 145 2e-35
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 2.3
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 29 2.3
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 29 2.3
At4g01330.1 68417.m00173 protein kinase family protein contains ... 29 3.1
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 29 3.1
At1g21440.1 68414.m02681 mutase family protein similar to carbox... 28 4.1
At3g63330.1 68416.m07125 protein kinase family protein contains ... 27 7.1
At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase, pu... 27 9.4
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 241 bits (590), Expect = 2e-64
Identities = 113/170 (66%), Positives = 134/170 (78%), Gaps = 2/170 (1%)
Frame = +2
Query: 86 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 259
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+ KYDSTHG FKGS+ V
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 260 QDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIIS 439
D L +NG K+ V S+RDP IPW GA+YVVES+GVFTT KA++HL+GGAKKVIIS
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIIS 206
Query: 440 APSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
APSADAPMFVVGVN Y P+ ++SNASCTTNCLAPLAKV+H+ F I+E
Sbjct: 207 APSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILE 256
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 240 bits (587), Expect = 6e-64
Identities = 112/170 (65%), Positives = 136/170 (80%), Gaps = 2/170 (1%)
Frame = +2
Query: 86 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 259
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG +KG++ V
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 260 QDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIIS 439
D L +NG ++ V S+RDP IPW GAEYVVES+GVFTT +AS+HL+GGAKKVIIS
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVIIS 204
Query: 440 APSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
APSADAPMFVVGVN + Y P+ ++SNASCTTNCLAPLAKV+H+ F I+E
Sbjct: 205 APSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILE 254
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 224 bits (548), Expect = 3e-59
Identities = 108/176 (61%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Frame = +2
Query: 71 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKG 247
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 248 -SVEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGA 421
++V+D ++ G K + VF R+P+ IPWG+AGA++VVESTGVFT DKA+AHL+GGA
Sbjct: 61 HELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGA 120
Query: 422 KKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
KKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLAKVI+D F IVE
Sbjct: 121 KKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVE 176
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 223 bits (546), Expect = 5e-59
Identities = 107/176 (60%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Frame = +2
Query: 71 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK- 244
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 245 GSVEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGA 421
++++D ++ G K + VF R+P+ IPW +AGA+YVVESTGVFT DKA+AHL+GGA
Sbjct: 61 NELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGA 120
Query: 422 KKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
KKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLAKVI+D F IVE
Sbjct: 121 KKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVE 176
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 153 bits (371), Expect = 8e-38
Identities = 83/172 (48%), Positives = 104/172 (60%), Gaps = 5/172 (2%)
Frame = +2
Query: 89 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 259
K+ INGFGRIGR LR + VV IND G+ +L KYDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 260 Q-DGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 436
D L V+G I + S+R+P +PWG+ G + V+E TGVF D A HL+ GAKKV+I
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 184
Query: 437 SAP-SADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
+AP D P +VVGVN E Y +ISNASCTTNCLAP KV+ F I++
Sbjct: 185 TAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIK 236
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 148 bits (358), Expect = 3e-36
Identities = 80/172 (46%), Positives = 104/172 (60%), Gaps = 5/172 (2%)
Frame = +2
Query: 89 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 259
K+ INGFGRIGR LR + ++AIND G+ +L KYDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 260 Q-DGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 436
+ + V+G I V S R+P +PW + G + V+E TGVF + A H+E GAKKVII
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 181
Query: 437 SAPS-ADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVE 589
+AP D P +VVGVN +AY +ISNASCTTNCLAP KV+ F I++
Sbjct: 182 TAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIK 233
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 145 bits (351), Expect = 2e-35
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Frame = +2
Query: 89 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 259
K+ INGFGRIGR LR + +VV +ND G+ +L KYDS G FK V++
Sbjct: 83 KVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKAEVKI 141
Query: 260 QDGFLV-VNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 436
D + V+G I V S RDP +PW + G + V+E TGVF A H++ GA KVII
Sbjct: 142 VDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVII 201
Query: 437 SAPS--ADAPMFVVGVNLEAYDPSF-KVISNASCTTNCLAPLAKVIHDNFEIVE 589
+AP+ AD P +V+GVN + Y +ISNASCTTNCLAP AKV+ + F IV+
Sbjct: 202 TAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVK 255
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 98 INGFGRIGRLVLRASIEKGAQVVAIND 178
I GFG +G + EKG ++VA++D
Sbjct: 211 IQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 98 INGFGRIGRLVLRASIEKGAQVVAIND 178
I GFG +G + EKG +VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 123 VWCSVLLLKRELKWSL*MTLSSVLTI 200
+WC+++LL+REL W + +V T+
Sbjct: 331 IWCALILLERELVWGVIEWSENVFTL 356
>At4g01330.1 68417.m00173 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 329
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 199 IVKTDERVIYSDHLSSLFNRSTEHQTANAAKS 104
I KT+ RV++SD +SS +R T +TA+ + S
Sbjct: 103 IGKTEHRVVFSDRVSSGESRGTVSETASYSGS 134
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 89 KIGINGFGRIGRLVLRASIEKGAQVVAIND 178
+ I GFG +G + +KG ++VA++D
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At1g21440.1 68414.m02681 mutase family protein similar to
carboxyvinyl-carboxyphosphonate phosphorylmutase
GB:O49290 from [Arabidopsis thaliana]; similar to
carboxyphosphonoenolpyruvate mutase (GI:47149)
[Streptomyces hygroscopicus]; contains Prosite PS00161:
Isocitrate lyase signature
Length = 336
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +2
Query: 338 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAY 493
+ A + TG+ D+A+ ++E GA + AP D + +G + Y
Sbjct: 191 RTDARALSAKTGLSDAIDRANLYMEAGADASFVEAPRDDDELKEIGRRTKGY 242
>At3g63330.1 68416.m07125 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 376
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 372 VSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLL 470
V+ L +H+ W E K+L Y+L LM C+L
Sbjct: 262 VTRALLDQHIRGWSENFKELAYKLRSLMEMCIL 294
>At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase,
putative similar to pinoresinol-lariciresinol reductase
TH1 [Tsuga heterophylla][GI:7578915]; contains
isoflavone reductase domain PF02716
Length = 317
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 98 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 196
+ G G +GR ++ A + +G + + P IG+D
Sbjct: 15 VGGTGSLGRRIVSACLAEGHETYVLQRPEIGVD 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,610,690
Number of Sequences: 28952
Number of extensions: 294640
Number of successful extensions: 922
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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