Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o16f
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF464189-1|AAN57784.1| 1075|Homo sapiens WAVE-associated Rac GTP...    36   0.082
AF427144-1|AAN07095.1| 1099|Homo sapiens MEGAP transcript varian...    36   0.082
AB007871-1|BAA24841.2| 1061|Homo sapiens KIAA0411 protein.             36   0.082

>AF464189-1|AAN57784.1| 1075|Homo sapiens WAVE-associated Rac GTPase
           activating protein protein.
          Length = 1075

 Score = 36.3 bits (80), Expect = 0.082
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +2

Query: 314 NSLSPRLRFQ--FSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFG--DHIKCLSDQG 481
           N L P+ RFQ   S  K+EN A R+H    + + L  V++V  R  F   +H+   SD+ 
Sbjct: 565 NPLFPKERFQDLISTIKLENPAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDEN 624

Query: 482 VPDHVIQTYCF 514
           + D      CF
Sbjct: 625 MMDPYNLAICF 635


>AF427144-1|AAN07095.1| 1099|Homo sapiens MEGAP transcript variant a
           protein.
          Length = 1099

 Score = 36.3 bits (80), Expect = 0.082
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +2

Query: 314 NSLSPRLRFQ--FSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFG--DHIKCLSDQG 481
           N L P+ RFQ   S  K+EN A R+H    + + L  V++V  R  F   +H+   SD+ 
Sbjct: 589 NPLFPKERFQDLISTIKLENPAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDEN 648

Query: 482 VPDHVIQTYCF 514
           + D      CF
Sbjct: 649 MMDPYNLAICF 659


>AB007871-1|BAA24841.2| 1061|Homo sapiens KIAA0411 protein.
          Length = 1061

 Score = 36.3 bits (80), Expect = 0.082
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +2

Query: 314 NSLSPRLRFQ--FSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFG--DHIKCLSDQG 481
           N L P+ RFQ   S  K+EN A R+H    + + L  V++V  R  F   +H+   SD+ 
Sbjct: 551 NPLFPKERFQDLISTIKLENPAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDEN 610

Query: 482 VPDHVIQTYCF 514
           + D      CF
Sbjct: 611 MMDPYNLAICF 621


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,396,739
Number of Sequences: 237096
Number of extensions: 1433768
Number of successful extensions: 2944
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)