Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o16f
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 40 0.001
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 40 0.001
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 40 0.001
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 40 0.001
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 38 0.004
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 36 0.022
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 36 0.029
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 36 0.029
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 36 0.029
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.089
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 34 0.089
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 33 0.12
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 33 0.16
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 33 0.16
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 33 0.16
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 33 0.16
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 33 0.16
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.21
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 33 0.21
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 33 0.21
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 32 0.27
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 31 0.48
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 31 0.48
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 31 0.63
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 28 5.9
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 27 7.7
U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.7
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 27 7.7
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 27 7.7
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 350 KPK-IENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKC---LSDQGVPDHVIQTYCFF 517
KPK ++ RL Y T T+L F I+V ++Y G I+C + +G + + YCF
Sbjct: 16 KPKTFDDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFI 75
Query: 518 MATFTI 535
TF I
Sbjct: 76 QNTFFI 81
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 350 KPK-IENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKC---LSDQGVPDHVIQTYCFF 517
KPK ++ RL Y T T+L F I+V ++Y G I+C + +G + + YCF
Sbjct: 16 KPKTFDDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFI 75
Query: 518 MATFTI 535
TF I
Sbjct: 76 QNTFFI 81
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +2
Query: 341 QFSKPKIEN-VAFRLHYQLTVTILLAFVILVCAREYFGDHIKCL---SDQGVPDHVIQTY 508
+F +P++++ RLHY T T++L F +LV A++Y G I+C + + Y
Sbjct: 17 RFLEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENY 76
Query: 509 CFFMATFTI 535
C+ T+ +
Sbjct: 77 CWVQNTYWV 85
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +2
Query: 341 QFSKPKIEN-VAFRLHYQLTVTILLAFVILVCAREYFGDHIKCL---SDQGVPDHVIQTY 508
+F +P++++ RLHY T T++L F +LV A++Y G I+C + + Y
Sbjct: 17 RFLEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENY 76
Query: 509 CFFMATFTI 535
C+ T+ +
Sbjct: 77 CWVQNTYWV 85
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVP---DHVIQTYCFFMATFTIVRHY 547
RL+Y +T ILLAF +L+ +++ G I+C+ P + + YC+ T+ +
Sbjct: 25 RLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFVEPTQ 84
Query: 548 NESLLQGE 571
+ SLL+ E
Sbjct: 85 DVSLLKKE 92
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQ---GVPDHVIQTYCFFMATFTI 535
RL+Y +T +IL+AF +L+ A+ Y G+ ++C + G + ++YCF T+ +
Sbjct: 27 RLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYFV 82
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPDHVIQ---TYCFFMATFTI 535
+L+Y T TIL +F +LV A++Y G I+C D + Q YC+ T+ +
Sbjct: 144 KLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYWV 199
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPDHVIQ---TYCFFMATFTI 535
+L+Y T TIL +F +LV A++Y G I+C D + Q YC+ T+ +
Sbjct: 144 KLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYWV 199
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 35.5 bits (78), Expect = 0.029
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSD---QGVPDHVIQTYCFFMATFTIVRHY 547
RL Y TV +L + + A++Y G I+C + +G + ++YC T+ + H
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYV--HM 80
Query: 548 NESLLQG 568
N S L G
Sbjct: 81 NNSNLPG 87
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 35.5 bits (78), Expect = 0.029
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSD---QGVPDHVIQTYCFFMATFTIVRHY 547
RL Y TV +L + + A++Y G I+C + +G + ++YC T+ + H
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYV--HM 80
Query: 548 NESLLQG 568
N S L G
Sbjct: 81 NNSNLPG 87
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 35.5 bits (78), Expect = 0.029
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSD---QGVPDHVIQTYCFFMATFTIVRHY 547
RL Y TV +L + + A++Y G I+C + +G + ++YC T+ + H
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYV--HM 80
Query: 548 NESLLQG 568
N S L G
Sbjct: 81 NNSNLPG 87
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 302 VASLNSLSPRLRFQFSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQG 481
V ++NS++ + F +PK ++A RL+ ++TV IL L+ + + GD I C +
Sbjct: 5 VGAINSVNALISRVFVQPK-GDLADRLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQ 63
Query: 482 VPD---HVIQTYCFFMATFTI 535
+ + YCF T+ +
Sbjct: 64 FNAQWVNFVNQYCFVHGTYFV 84
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.089
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 362 ENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPDHVIQ---TYCFFMATFT 532
+++ +L+Y T I+ F ILV A++Y G I+C + + Q YC+ T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 533 IVRH 544
+ H
Sbjct: 81 LPLH 84
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.089
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 362 ENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPDHVIQ---TYCFFMATFT 532
+++ +L+Y T I+ F ILV A++Y G I+C + + Q YC+ T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 533 IVRH 544
+ H
Sbjct: 81 LPLH 84
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKC---LSDQGVPDHVIQTYCFFMATFTI 535
RL+Y T +L+ F + + A++Y G I+C G + + YCF T+ I
Sbjct: 22 RLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQFTGAWEQYSENYCFVQNTYFI 77
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 344 FSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD-----HVIQTY 508
F K+ RLH TV +L FV+L A+++FG+ I C+ + D I +
Sbjct: 16 FKAAKLYEFYDRLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNF 74
Query: 509 CFFMATF 529
C F TF
Sbjct: 75 CLFYGTF 81
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 344 FSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD-----HVIQTY 508
F K+ RLH TV +L FV+L A+++FG+ I C+ + D I +
Sbjct: 16 FKAAKLYEFYDRLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNF 74
Query: 509 CFFMATF 529
C F TF
Sbjct: 75 CLFYGTF 81
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 338 FQFSKPKIEN-VAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD---HVIQT 505
F+ P++++ +L+Y T I+ AF I+V A++Y G I+C D +
Sbjct: 10 FKGLHPRVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTEN 69
Query: 506 YCFFMATF 529
YC+ T+
Sbjct: 70 YCWVENTY 77
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 338 FQFSKPKIEN-VAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD---HVIQT 505
F+ P++++ +L+Y T I+ AF I+V A++Y G I+C D +
Sbjct: 10 FKGLHPRVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTEN 69
Query: 506 YCFFMATF 529
YC+ T+
Sbjct: 70 YCWVENTY 77
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 338 FQFSKPKIEN-VAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD---HVIQT 505
F+ P++++ +L+Y T I+ AF I+V A++Y G I+C D +
Sbjct: 10 FKGLHPRVDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTEN 69
Query: 506 YCFFMATF 529
YC+ T+
Sbjct: 70 YCWVENTY 77
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 362 ENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPD---HVIQTYCFFMATFT 532
+N A R+ + T+ IL+ F LV + FG I CL PD + +CF+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 533 IVRHYN 550
I +N
Sbjct: 80 IPPLHN 85
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 338 FQFSKPKIENVAF-RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVP---DHVIQT 505
F KP+++++ RL+Y + I++ + + AR+Y G ++C + +
Sbjct: 8 FSMVKPRLDDLGTDRLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAED 67
Query: 506 YCFFMATFTI 535
YCF T+ +
Sbjct: 68 YCFVYNTYWV 77
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.21
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 335 RFQFSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVP---DHVIQT 505
+FQ S ++A R YQ T T+L I++ A +Y G I+C + +T
Sbjct: 11 KFQRSAES-NDIADRFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAET 69
Query: 506 YCFFMATF 529
YCF T+
Sbjct: 70 YCFIKGTY 77
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 338 FQFSKPKIENVAF-RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVP---DHVIQT 505
F KP+++++ RL+Y + I++ + + AR+Y G ++C + +
Sbjct: 8 FSMVKPRLDDLGTDRLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAED 67
Query: 506 YCFFMATFTI 535
YCF T+ +
Sbjct: 68 YCFVYNTYWV 77
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQ---GVPDHVIQTYCFFMATFTI 535
R++ T +L+A + + ++YFG IKC + + G D + +CF T+ +
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQ---GVPDHVIQTYCFFMATFTI 535
R++ T +L+A + + ++YFG IKC + + G D + +CF T+ +
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCL---SDQGVPDHVIQTYCFFMATFTIVRHY 547
RL+Y T IL +++ A++Y G I+C + + I++YC+ T+ I +
Sbjct: 26 RLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYWIPMYE 85
Query: 548 N 550
N
Sbjct: 86 N 86
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCL---SDQGVPDHVIQTYCFFMATFTIVRHY 547
RL+Y T IL +++ A++Y G I+C + + I++YC+ T+ I +
Sbjct: 42 RLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYWIPMYE 101
Query: 548 N 550
N
Sbjct: 102 N 102
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 344 FSKPKIENVAF-RLHYQLTVTILLAFVILVCAREYFGDHIKC 466
F +P+ ++ F RLHY T T LL +L+ + + G I+C
Sbjct: 38 FLQPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIEC 79
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 496 YMVGHTL-IRKTFDVIPEILS-SADQDHESQQ-NRHSQLVMQPEGH 368
Y++G T +R FDV + + + HES++ HS+LV Q EGH
Sbjct: 171 YIIGGTEGVRFNFDVHSLTMKVNPEAKHESEKFTWHSELVSQNEGH 216
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 326 PRLRFQFSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKC 466
P LR Q P+I V HY L V + L FV ++ A Y I C
Sbjct: 477 PNLRSQI--PEINQVGPIAHYYLDVIVFLIFVSIITA--YISFQIVC 519
>U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical
protein K07C11.4 protein.
Length = 571
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 52 FCLSYLFISTRYGVILGV*HKSDERVSVSRLHV 150
FC+S ++T YG I+G HKS V+ S+ HV
Sbjct: 17 FCVSKPKVTTPYGPIVGFEHKS--TVTGSKYHV 47
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCL 469
RLH T +L+ +LV +++ G ++CL
Sbjct: 24 RLHSYFTCNLLIGLAVLVSFKQFGGKPVECL 54
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 377 RLHYQLTVTILLAFVILVCAREYFGDHIKCL 469
RLH T +L+ +LV +++ G ++CL
Sbjct: 24 RLHSYFTCNLLIGLAVLVSFKQFGGKPVECL 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,081,601
Number of Sequences: 27780
Number of extensions: 234413
Number of successful extensions: 662
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -