Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o14r
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 131 SFIMLLKSVWLSRYISAIKN 72
           +F+MLL +VW  +Y +   N
Sbjct: 6   AFLMLLGAVWCEQYTTKYDN 25


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 495 SCCVCPCDLSYV 530
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 328 QGNLK*EFGFHYTENGDKLLHVC 260
           +GNLK   G H  +   ++LH C
Sbjct: 175 KGNLKTHMGVHRAKPPMRVLHQC 197


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 381 NFINSLTK*IQEKYNVYQMSRILIQQLYVISNFKLSISSCCVCPC 515
           +F++++   + EK NV  +   ++  L V  NF   +S   +C C
Sbjct: 232 DFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 158 FKYQ*HTNTSFIMLLKSVWLSRYISAIKNC 69
           F Y   T  +   L+ + W+S +   + NC
Sbjct: 292 FAYVTRTGANIKKLIVNTWISLFCVKVTNC 321


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 425 IIFFLYLFRQRIYEIERTRRL*NY 354
           I+FF+YL+ Q+   +  ++ L  Y
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLLYTY 41


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -1

Query: 307 FGFHYTENGDKLLHV 263
           +G+HY+ +G ++ H+
Sbjct: 391 YGYHYSGDGGEVAHL 405


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -1

Query: 307 FGFHYTENGDKLLHV 263
           +G+HY+ +G ++ H+
Sbjct: 339 YGYHYSGDGGEVAHL 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,011
Number of Sequences: 336
Number of extensions: 3600
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)