Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o14f
(515 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 3.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 3.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 4.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 5.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 7.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 10.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 10.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 10.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 10.0
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 331 WLGIHSSYYSSDFLKSQT 278
W+GIH +SD +QT
Sbjct: 353 WMGIHEPETTSDATSAQT 370
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 140 VQQYYTLFD---DPAQRANLVNMYNVETSFMTFEGV 238
+ Q YT FD DP + N+ + V +M G+
Sbjct: 440 LNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGL 475
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 3.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 331 WLGIHSSYYSSDFLKSQT 278
W+GIH +SD +QT
Sbjct: 353 WMGIHEPETTSDATSAQT 370
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 140 VQQYYTLFD---DPAQRANLVNMYNVETSFMTFEGV 238
+ Q YT FD DP + N+ + V +M G+
Sbjct: 440 LNQLYTAFDVLTDPKKNPNVYKVETVGDKYMAVSGL 475
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 337 KHWLGIHSSYYS 302
K+WL +H+SY S
Sbjct: 436 KNWLPVHTSYKS 447
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3
Query: 393 GGSSSHFNLPRTLIKTPPSNIG 328
G S NL L+ PP N G
Sbjct: 364 GSSIPKLNLSTALMSQPPPNFG 385
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = -2
Query: 337 KHWLGIHSSYYSSDFLKSQTI*FFHNFNSTLQLYSLK 227
+ W + ++ + SQ H+F STL + S+K
Sbjct: 360 RSWSSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVK 396
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 110 NINYIEQIPIPVPIYCG 126
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 110 NINYIEQIPIPVPIYCG 126
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 110 NINYIEQIPIPVPIYCG 126
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 112 NINYIEQIPIPVPVYCG 128
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 345 NINYIEQIPIPVPVYCG 361
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 159 NV*YCCTKPLPIASYCG 109
N+ Y P+P+ YCG
Sbjct: 345 NINYIEQIPIPVPVYCG 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,449
Number of Sequences: 438
Number of extensions: 3252
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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