Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o12r
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   262   2e-70
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   262   2e-70
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   262   2e-70
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    29   3.1  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    29   3.1  
AF077541-9|AAC64633.1|  909|Caenorhabditis elegans Cysteinyl trn...    29   4.1  
AF077541-8|AAK68426.1|  908|Caenorhabditis elegans Cysteinyl trn...    29   4.1  
Z68297-5|CAC70081.1|  394|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  262 bits (642), Expect = 2e-70
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -2

Query: 687 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 508
           ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 354 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 413

Query: 507 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 328
           +TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF  H+
Sbjct: 414 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 473

Query: 327 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 220
           ++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 474 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  262 bits (642), Expect = 2e-70
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -2

Query: 687 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 508
           ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 346 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 405

Query: 507 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 328
           +TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF  H+
Sbjct: 406 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 465

Query: 327 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 220
           ++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 466 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  262 bits (642), Expect = 2e-70
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -2

Query: 687 ETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 508
           ETELFYKG+RPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA
Sbjct: 381 ETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA 440

Query: 507 ATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQHI 328
           +TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF  H+
Sbjct: 441 STQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHL 500

Query: 327 KTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 220
           ++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 501 RSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 533 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 429
           P    +W   HS CS  EC  L S   D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 533 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 429
           P    +W   HS CS  EC  L S   D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522


>AF077541-9|AAC64633.1|  909|Caenorhabditis elegans Cysteinyl trna
           synthetase protein1, isoform a protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 439 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 558
           G  L L+EE  K  S V + LC  +  R+ + K  +L  L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688


>AF077541-8|AAK68426.1|  908|Caenorhabditis elegans Cysteinyl trna
           synthetase protein1, isoform b protein.
          Length = 908

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 439 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 558
           G  L L+EE  K  S V + LC  +  R+ + K  +L  L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687


>Z68297-5|CAC70081.1|  394|Caenorhabditis elegans Hypothetical
           protein F11A10.7 protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 16/141 (11%)
 Frame = -2

Query: 648 NVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS-------DLDAATQQLL 490
           N  L  S   ++A   A+    G+M L + +      F+ FG+       +L  A ++L 
Sbjct: 126 NRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLT 185

Query: 489 NRGMRLTELLKQGQ-----YVPMAIEEQV--AIIYCGVR--GHLDKLDPSKITAFEKEFT 337
            R   LT  L   Q     YV    EE V  A+ Y G +   H+ ++D  K+ + +KEF 
Sbjct: 186 KRVTHLTGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVD--KVGSKKKEFG 243

Query: 336 QHIKTSHQGLLSTIAKDGQIT 274
           + +      L   I +D  IT
Sbjct: 244 KDMAIFVGNLPFEITEDALIT 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,432
Number of Sequences: 27780
Number of extensions: 293829
Number of successful extensions: 996
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)