Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o12f
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 37 0.012
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 36 0.016
12_01_0899 - 8689125-8689383,8689540-8689826 31 0.44
02_04_0275 - 21469391-21470650 31 0.44
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241... 31 0.59
07_01_1078 - 9707125-9707640,9708091-9708306,9708312-9709685,970... 31 0.78
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 30 1.4
04_04_0946 - 29579779-29580004,29580098-29580210 30 1.4
05_03_0313 + 12200743-12200955,12201238-12201622,12201997-122022... 29 1.8
12_02_0305 - 17235832-17236379,17237345-17237444 29 2.4
12_02_0396 + 18577574-18578056,18578094-18578723 29 3.1
07_01_0711 + 5374717-5374992,5375022-5375277,5375317-5375384,537... 29 3.1
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729... 28 4.1
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 28 4.1
08_02_0361 - 16205476-16205727 28 5.5
04_01_0319 - 4291144-4293402 28 5.5
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 5.5
01_01_1195 - 9567023-9567789,9567871-9568120 28 5.5
12_01_0543 - 4271380-4272218,4272258-4272873 27 7.2
07_01_0056 + 428297-428332,428574-430127,430209-430274 27 7.2
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 27 7.2
03_02_0057 - 5312812-5312852,5313061-5313201,5314159-5314345 27 7.2
12_01_0180 - 1335825-1335980,1336584-1336670,1336767-1336859,133... 27 9.6
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706... 27 9.6
03_05_0955 + 29168771-29170507 27 9.6
03_05_0916 - 28762214-28762414,28763144-28763242,28763573-287639... 27 9.6
02_01_0627 + 4708648-4708836,4708975-4709064,4709579-4709664,471... 27 9.6
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 27 9.6
01_04_0063 - 15574855-15575143,15575398-15575602,15575746-155759... 27 9.6
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 369 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
+G L ++ + V VF G + + V+ TG ++ PV +LGRV N G PID
Sbjct: 57 RGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPID 114
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 369 KGMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
+G L ++ + V VF G + + V+ TG ++ PV +LGR+ N G PID
Sbjct: 97 RGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPID 154
>12_01_0899 - 8689125-8689383,8689540-8689826
Length = 181
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 130 PRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRL 261
P C R P+ PW +A +PP PP+ G+ RP L
Sbjct: 38 PPCARLLLPEPPWGMAALPPEPPWGAAAHPPAPHWGAGPSRPAL 81
>02_04_0275 - 21469391-21470650
Length = 419
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 366 GLRRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 256
G RRT + G SS+H H RY Q SRH + QP
Sbjct: 345 GTRRTAMATDVGTSSNH-HVRYRFQDSRHCHAAPQQP 380
>02_03_0049 +
14421408-14421942,14421988-14422842,14423847-14424151,
14424469-14424984
Length = 736
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 234
+PR + WR P LA + QP K P S P SK+
Sbjct: 412 MPRNRYWRTPVKSPVLAKKLEQPAQKRPSSAPKSKK 447
>07_01_1078 -
9707125-9707640,9708091-9708306,9708312-9709685,
9709704-9710044,9710120-9710198
Length = 841
Score = 30.7 bits (66), Expect = 0.78
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRG 237
+P+ + WR P + + QP K P SPP SK+G
Sbjct: 635 MPKNRYWRTPVKSPVPSMKLEQPAQKKPSSPPKSKKG 671
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEP 249
+PR + WR P P A + Q K P SPP K+ + P
Sbjct: 552 MPRNRYWRLPVKPPIPAKKLEQLAQKKPPSPPKPKKPKVGP 592
>04_04_0946 - 29579779-29580004,29580098-29580210
Length = 112
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 318 HKHERYHHQCSRHDQSLLDQPWARLQGSSLR 226
H H R+HHQ + ++ PW +G +LR
Sbjct: 81 HHHHRHHHQQPQPRPAIDANPWGTARGPALR 111
>05_03_0313 +
12200743-12200955,12201238-12201622,12201997-12202274,
12202359-12202976
Length = 497
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 234
+P+ + W+ P P LA + QP K P S P K+
Sbjct: 440 MPKNRYWKMPVEPPILAKKLEQPAQKKPPSAPKPKK 475
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 187 SQPPTKLPRSPPSSKRGSLEPRPRLI 264
SQPPT P PP+ GS PR +I
Sbjct: 114 SQPPTIAPTQPPTPSGGSQCPRENVI 139
>12_02_0396 + 18577574-18578056,18578094-18578723
Length = 370
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 234
+PR + WR P P A + QP + P S P K+
Sbjct: 313 MPRNRYWRTPVKPSTPAKKLEQPAQRKPPSAPKPKK 348
>07_01_0711 +
5374717-5374992,5375022-5375277,5375317-5375384,
5375556-5376287,5377013-5377270
Length = 529
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGS 240
+PR + W+ P A + QP + P S P K+GS
Sbjct: 409 MPRNRYWKTPVKSSTPAKKLEQPAQRKPSSAPKPKKGS 446
>05_03_0577 +
15671570-15672432,15672571-15672785,15672825-15672954,
15672990-15673794,15674505-15674715,15674829-15675436
Length = 943
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 124 LLPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKRGS 240
++PR + W+ P P A + Q K P S P ++GS
Sbjct: 635 MMPRNRYWKTPVKPPIPAKKLEQSAQKKPPSAPKPRKGS 673
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 411 PHPHCQVPS*GPFP*GLRRTPPSPQPGCSSSHKHERY--HHQCS 286
PH Q P P P PP +P S+SH H R+ HH S
Sbjct: 110 PHHQQQGPGASPSP---PPPPPRGRPSFSASHSHHRHGGHHHRS 150
>08_02_0361 - 16205476-16205727
Length = 83
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 252 ARLQGSSLRGWWRSRQLCGWL 190
A L G + WWR R GWL
Sbjct: 12 ASLGGGGVELWWRRRSAAGWL 32
>04_01_0319 - 4291144-4293402
Length = 752
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Frame = -1
Query: 249 RLQGSSLRGWWRSRQL-----CGWLRH-VVC 175
R SS G+W R+L CGW+RH V+C
Sbjct: 339 RALASSWTGFWLDRELRPVWGCGWIRHEVLC 369
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 GACLMLLPRCQRWRCPQWPWHLANYMSQPPTKL-PRSPPSSKRGSLEPRPR 258
G+ ++ +PR +R W A ++ PP + P+ P R +P PR
Sbjct: 149 GSAIIWVPRSRRSHGKVGRWTRAYHLKVPPPPMAPQPPRGGPRQRYQPTPR 199
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 351 PPSPQPGCSSSHKHERYHHQCS 286
PP PQP + H H RY Q S
Sbjct: 176 PPPPQPVVALHHHHHRYSQQYS 197
>12_01_0543 - 4271380-4272218,4272258-4272873
Length = 484
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 234
+PR + W+ P A + QP + P S P SKR
Sbjct: 427 MPRNRYWKTPVKSSIPAKKLEQPAQRKPSSTPKSKR 462
>07_01_0056 + 428297-428332,428574-430127,430209-430274
Length = 551
Score = 27.5 bits (58), Expect = 7.2
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 246 AAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALNL-EPDNVGVVVFG 422
+AP D +ET +L G G L+ I ++ +E +G AL +P G
Sbjct: 233 SAPTKDADETQDILPAGSGSPDAQDLELILRQKALENFRKFRGAALMAGKPQTNGTGKEV 292
Query: 423 NDKLIKEGDIVKRTGAIVDVPVGEQILGRVVN-ALGNP 533
K D + VD P Q G VN ++G+P
Sbjct: 293 VTDSPKSSDTKIAEASSVDKPFQRQRSGLSVNCSVGSP 330
>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
Length = 276
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 366 GLRRTP-PSPQ-PGCSSSHKHERYHHQCSRHDQSLLDQPWARLQG 238
G RR P PSPQ S H H R+H Q + +S P + G
Sbjct: 149 GGRRAPSPSPQMHAASRRHHHGRHHQQVAPKARSASASPQHNIYG 193
>03_02_0057 - 5312812-5312852,5313061-5313201,5314159-5314345
Length = 122
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 313 TRAIPSPMLKTR-PVSSRSALGAAPRILSSRMV 218
+ AIPSP+L+ R P S +A A R SR+V
Sbjct: 3 SHAIPSPLLRARPPAPSAAAAAATGRRAPSRVV 35
>12_01_0180 -
1335825-1335980,1336584-1336670,1336767-1336859,
1336985-1337057,1337153-1337247,1337917-1338004,
1338135-1338424
Length = 293
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 181 YMSQPPTKLPRSPP--SSKRGSLEPRP 255
+ S PPT P +PP S+R +L PRP
Sbjct: 13 HRSTPPTPRPTAPPLLHSRRLALPPRP 39
>06_01_0916 +
7058991-7059050,7060057-7061235,7061778-7063481,
7063557-7064432,7064457-7064660,7065039-7065143,
7065407-7065496,7066066-7066176,7066349-7066780
Length = 1586
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 PPTKLPRSPPSSKRGSLEP 249
PP +P S S++GSLEP
Sbjct: 511 PPQNMPSSSAKSRKGSLEP 529
>03_05_0955 + 29168771-29170507
Length = 578
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 351 PPSPQPGCSSSHKHERYHHQCSRHDQSLLDQPWA 250
PP P P + H H++ HH H Q + P A
Sbjct: 39 PPPPPPQSMAPHHHQQKHH---HHHQQMPAMPQA 69
>03_05_0916 -
28762214-28762414,28763144-28763242,28763573-28763998,
28764259-28764501,28764706-28764927,28765392-28765721,
28767380-28767800,28768292-28768404,28769224-28769367,
28769439-28769570,28769802-28770013,28770983-28771505
Length = 1021
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 381 LNLEPDNVGVVVFGNDKLIKEGDIV 455
L L DN+GV V N KLI++G I+
Sbjct: 241 LLLGKDNIGVFVDQNGKLIQDGRII 265
>02_01_0627 +
4708648-4708836,4708975-4709064,4709579-4709664,
4710108-4710332,4711251-4711314,4711793-4712491,
4712657-4712764,4712920-4713051,4713183-4713359,
4713920-4713973,4714072-4714134,4714227-4714928,
4715048-4715175,4715563-4715839
Length = 997
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 160 WPWHLANYMSQPPTKLPRSP 219
WP H NY+S+ T PRSP
Sbjct: 675 WPEHCKNYLSRILTLGPRSP 694
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 357 RTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQP 256
R PPSP P SS K + Q D++ LD P
Sbjct: 29 RAPPSPSPSTSSRAKPRKVAAQ-PETDEAALDNP 61
>01_04_0063 -
15574855-15575143,15575398-15575602,15575746-15575947,
15576038-15576613,15576623-15576786,15576826-15576928,
15577259-15577847,15578056-15578372
Length = 814
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 127 LPRCQRWRCPQWPWHLANYMSQPPTKLPRSPPSSKR 234
+P+ + W+ P P A + QP K P S P K+
Sbjct: 592 MPKHRYWKTPVKPPIPAKKLEQPAQKKPSSAPKPKK 627
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,771
Number of Sequences: 37544
Number of extensions: 360830
Number of successful extensions: 1427
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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