Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o12f
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 187 4e-48
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 187 4e-48
AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical ... 126 1e-29
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 118 3e-27
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 39 0.002
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 39 0.003
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.23
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 30 0.93
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 30 0.93
U64858-4|AAB18282.2| 151|Caenorhabditis elegans Hypothetical pr... 30 0.93
Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 29 1.6
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 29 2.8
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 28 3.7
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 28 4.9
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 28 4.9
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 28 4.9
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 28 4.9
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 28 4.9
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 28 4.9
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 27 6.5
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 27 8.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 187 bits (456), Expect = 4e-48
Identities = 90/111 (81%), Positives = 102/111 (91%)
Frame = +3
Query: 207 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 386
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 7 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 66
Query: 387 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVV+ALGNPID
Sbjct: 67 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPID 117
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 187 bits (456), Expect = 4e-48
Identities = 90/111 (81%), Positives = 102/111 (91%)
Frame = +3
Query: 207 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 386
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 387 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVV+ALGNPID
Sbjct: 94 LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPID 144
>AL023815-2|CAD92383.1| 146|Caenorhabditis elegans Hypothetical
protein H28O16.1b protein.
Length = 146
Score = 126 bits (303), Expect = 1e-29
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = +3
Query: 207 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 386
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 387 LEPDNVGVVVFGNDKL 434
L+ DNVGVVVFGNDK+
Sbjct: 94 LDVDNVGVVVFGNDKI 109
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 118 bits (284), Expect = 3e-27
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +3
Query: 207 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 386
+E+S ILEERILG +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34 SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93
Query: 387 LEPDNVGVVVFGN 425
L+ DNVGVVV GN
Sbjct: 94 LDVDNVGVVVLGN 106
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 408 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
+ + G + L++ G V TG + +PVG + LGR++N +G PID
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIGEPID 162
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 372 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPID 539
G L + + V VF G + + I + TG I+ PV E +LGR+ N G PID
Sbjct: 66 GQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPID 122
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 366 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVNALGNPI 536
L G + LE D + V+ + GD V RTG + V +G I+G + + + P+
Sbjct: 39 LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPL 95
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 312 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 488
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 489 GEQILGR-VVNAL 524
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 30.3 bits (65), Expect = 0.93
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 312 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 488
+ GL +Q+ + E G+K + +L + +DK LIK G I+ + I VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690
Query: 489 GEQILGR-VVNAL 524
++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703
>U64858-4|AAB18282.2| 151|Caenorhabditis elegans Hypothetical
protein C16D9.3 protein.
Length = 151
Score = 30.3 bits (65), Expect = 0.93
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 351 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 262
PP Q C ER H C R+DQS+++
Sbjct: 96 PPGSQLKCHFDKSRERLHANCYRYDQSVVN 125
>Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical
protein T15D6.9 protein.
Length = 407
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 351 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 262
PP Q C H +Y+ C R+DQS+++
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIIN 314
>AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical
protein T24C4.2 protein.
Length = 423
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 385 LRAIPLRPEENSTISSAWMFFKP*TRAIPSPMLKTRPVSSRSALGAAPRILS 230
+R IPLRP +NS F++ + SP++ S LGAA R+L+
Sbjct: 352 VRPIPLRPSQNSA------FYQMLNSSSTSPIIAVTKAEVDSVLGAASRLLN 397
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 360 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQ 259
R PP P P + SHK+E SR S L++
Sbjct: 54 RELPPPPPPRKTPSHKYEEMRRSLSRGPSSTLER 87
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 462 TGAIVDVPVGEQILGRVVNALGNPID 539
TG I PV +LGR+ N G PID
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPID 134
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 395 RFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKD-PLFEDG 219
R KG E E + LLS LQ ++S + + +D + ISLG +++ LF D
Sbjct: 32 RMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQNFVLFIDS 91
Query: 218 GDLGSFV 198
G +V
Sbjct: 92 GSSNLWV 98
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 453 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 512
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 453 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 512
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 280 RPVSSRSALGAAPR-ILSSRMVEISAALWVVETCSLRDXXXXXXXXTFDTWVAALGKRLA 104
RP SSR + + PR I + E +AA + E+ D D WV ++ KR+A
Sbjct: 422 RPRSSRRSEHSTPRQIAKVKQAEGTAAQLIEESVPDDDQTETIEVKRTDRWVVSMKKRIA 481
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 193 PPTKLPRSPPSSKRGSLEPRPR 258
PP LP PPS ++ LEP+ R
Sbjct: 819 PPPPLPPPPPSVEKKKLEPQDR 840
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 193 PPTKLPRSPPSSKRGSLEPRPR 258
PP LP PPS ++ LEP+ R
Sbjct: 819 PPPPLPPPPPSVEKKKLEPQDR 840
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 154 PQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPR 258
P P ANY P + R+PPSS + +P PR
Sbjct: 264 PGAPGKDANYCPCPQRQDDRTPPSSGTSAPQPPPR 298
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 336 PGCSSSHKHERYHHQCSRHDQ 274
P SSS KH +HH+ R D+
Sbjct: 108 PSSSSSSKHHHHHHKKERKDK 128
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 145 WRCPQWPWHLANYMSQPPTKLPRSPPSSKRGSLEPRPRLI 264
W P PW + +PP LP PP + + +P+++
Sbjct: 59 WDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEPQQDQPQVM 98
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = -3
Query: 391 SKLRAIPLRPEENSTISSAWMFFKP*TRAIPSPMLKTRPVSSRSALGAAPRILSSRMVEI 212
S+ + PL P + A +KP + S L R + + L +S R
Sbjct: 492 SEASSTPLSPARRTKSEEA--IWKPVLHTVKSSKLYKRAIEKQGRL--VKLFMSLRFPVA 547
Query: 211 SAALWVVETCSL 176
+AAL V+ TCSL
Sbjct: 548 AAALLVLTTCSL 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,431,903
Number of Sequences: 27780
Number of extensions: 261719
Number of successful extensions: 970
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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