Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o11f
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.060
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   5.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.1  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.060
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 63  PALSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQPS 188
           P+L+  +P SV   PPA+P  PP     PE    A V   PS
Sbjct: 88  PSLAPVVPSSVVTAPPARPSQPPTTRFAPE--PRAEVKFVPS 127



 Score = 24.2 bits (50), Expect = 3.0
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 84  PDSVGAYPPAKPFTPPGVYPHPEGV 158
           P   G     +P  P G+YP P GV
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGV 224


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 36  GTTHYGFVAPALSNPIPDSVGAYPPA 113
           G     F APAL+   P  V + PPA
Sbjct: 41  GNRGSSFAAPALTQAAPAPVVSQPPA 66


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 99   AYPPAKPFTPPGVYPHPEGVTNATVNMQPS 188
            A PPA P  P    P P  +      ++PS
Sbjct: 1259 ASPPASPLVPDTAVPDPHSLYAIPNKVKPS 1288


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 75  NPIPDSVGAYPPAKPFTPP 131
           +P+P   G+ P A P +PP
Sbjct: 290 SPVPRLAGSSPAAAPPSPP 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,892
Number of Sequences: 2352
Number of extensions: 12791
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)