Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o11f
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 49 3e-06
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 41 7e-04
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 38 0.005
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 37 0.009
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 36 0.027
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 35 0.046
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 32 0.33
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 32 0.33
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.43
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.43
U40413-2|AAK39174.1| 296|Caenorhabditis elegans Hypothetical pr... 31 0.57
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 31 0.76
Z81460-1|CAB03830.2| 215|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical ... 30 1.3
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 29 1.7
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 29 2.3
AC006794-1|AAK68504.1| 407|Caenorhabditis elegans Hypothetical ... 29 3.1
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 28 5.3
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 28 5.3
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 28 5.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 27 9.3
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 267 TCFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCC---LGLIPYCFDTFKEAEHYC 437
TC++C K V T + + GS+ I + L C L +P+C D+ K+A HYC
Sbjct: 92 TCYSCGKYVHTLPKF--------VIGSLTWIVFILVLICFFPLAFVPFCLDSCKDAHHYC 143
Query: 438 PNCNTFIG 461
P CN +G
Sbjct: 144 PRCNALLG 151
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 243 MGTEPTTLTCFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKE 422
+ P L C C T + + + T++ I + +P+C +TFK+
Sbjct: 29 LSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKD 88
Query: 423 AEHYCPNCNTFIG 461
AEHYCP+C +IG
Sbjct: 89 AEHYCPSCRAWIG 101
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 252 EPTTLTCFNCNKIVTTRVTYTTAW--HTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEA 425
EP T C CN V TRV T + T L G + LCC +C D FK++
Sbjct: 65 EPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVFFPL---LCC-----FCLDGFKDS 116
Query: 426 EHYCPNCNTFI 458
H CPNC T +
Sbjct: 117 RHSCPNCGTIL 127
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 43.2 bits (97), Expect = 1e-04
Identities = 31/135 (22%), Positives = 46/135 (34%)
Frame = +3
Query: 57 VAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQPSRXXXXXXXXXXXXXXX 236
V PA + + Y P+ T P + H G V++
Sbjct: 6 VPPAYNPDYAPTQPVYHPSSHVTAPPYHYHDNGGFENVVDVNSPVYTTLASGPMPTSTII 65
Query: 237 NAMGTEPTTLTCFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTF 416
+ T L C C + TR T + ++ L C CC +P+C +
Sbjct: 66 IRLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWC--CCF--LPFCLRSC 121
Query: 417 KEAEHYCPNCNTFIG 461
K+ H CPNC IG
Sbjct: 122 KDIIHTCPNCRAMIG 136
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 40.7 bits (91), Expect = 7e-04
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 279 CNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEAEHYCPNCNTFI 458
C K TT +T T H + IC C LI CFD K+ +H CPNC +
Sbjct: 36 CPKCQTTIMTSVTT-HIGMCWWLICFFGTFL-FCWPILICLCFDVSKDVDHNCPNCGLLL 93
Query: 459 GKSNK 473
SN+
Sbjct: 94 ATSNR 98
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 249 TEPTTLTC--FNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKE 422
TEP + C CN++ T W I G + I LCC D+ K+
Sbjct: 16 TEPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLLFWPICYWLCC--------DSSKD 67
Query: 423 AEHYCPNCNTFI 458
HYCP+C T +
Sbjct: 68 TMHYCPSCGTLL 79
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 294 TTRVTYTTAWHTHLIA--GSICLITIVCSLCCLGLIPY-CFDTFKEAEHYCPNCNTFIGK 464
T Y T+ +TH+ IC V LCC + + C D K+ H CP+C + K
Sbjct: 38 TCEKAYMTSVNTHIGVCWWLICFFGTV--LCCFPFLFFLCCDVSKDVNHNCPSCGMLLAK 95
Query: 465 SNKC*FQ 485
N+ F+
Sbjct: 96 KNRAGFK 102
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = +3
Query: 270 CFNCNKIVTTRVTYT--TAWHTHLIAGSI--CLITIVCSLCCLGLIPYCFDTFKEAEHYC 437
C C VTTR ++ T W L G C + C LCC G K+ +H+C
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYC-LCCAGS--------KDVKHFC 138
Query: 438 PNCNTFIG-KSNKC 476
PNC T + K C
Sbjct: 139 PNCGTMLACKKRGC 152
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 255 PTTLTCFNC-NKIVT--TRVTYTTAWHTHLIAG--SICLITIVCSLCCLGLIPYCFDTFK 419
P + C +C N IV+ RV W I I L I CC +P+ D
Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCC---VPFFLDQLL 99
Query: 420 EAEHYCPNCNTFIGKSNK 473
+ H CP C F+G+ N+
Sbjct: 100 DVNHSCPACKKFLGRFNR 117
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 270 CFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEAEHYCPNCN 449
C C +V TRV + I +C C C L+ F K+A+H+CPNC
Sbjct: 63 CTRCQTLVQTRVEHKIG-----IMWWLCATLSFCFFFCCYLL--FFPITKDAQHFCPNCG 115
Query: 450 TFI 458
+ +
Sbjct: 116 SLL 118
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 270 CFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEAEHYCPNCN 449
C NC + VTT+ + I + + C + C +C F + H CPNCN
Sbjct: 27 CTNCQETVTTKTEQVFGMLNFALF--ITCLFLPCFIVCF----WC-RCFMDVHHRCPNCN 79
Query: 450 TFIGKSNK 473
+GK ++
Sbjct: 80 KSLGKRDR 87
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +3
Query: 252 EPTTLTCFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEAEH 431
+P L C C IV + V T L A C + + L +P +F + H
Sbjct: 948 KPLVLFCSRCRNIVESDVHRETG----LFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVH 1003
Query: 432 YCPNCNTFIGK 464
CP C+ +G+
Sbjct: 1004 ICPLCSHIMGR 1014
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +3
Query: 252 EPTTLTCFNCNKIVTTRVTYTTAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEAEH 431
+P L C C IV + V T L A C + + L +P +F + H
Sbjct: 948 KPLVLFCSRCRNIVESDVHRETG----LFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVH 1003
Query: 432 YCPNCNTFIGK 464
CP C+ +G+
Sbjct: 1004 ICPLCSHIMGR 1014
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.43
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 LPPPYSSVVGTTHYGFVAPALSN--PIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQ 182
+PPP SV P ++ P P S G +PP P PPG P P G+
Sbjct: 263 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP-PPPGRTPGPPGMPGMPPPPP 321
Query: 183 PSR 191
PSR
Sbjct: 322 PSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.43
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 LPPPYSSVVGTTHYGFVAPALSN--PIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQ 182
+PPP SV P ++ P P S G +PP P PPG P P G+
Sbjct: 273 VPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP-PPPGRTPGPPGMPGMPPPPP 331
Query: 183 PSR 191
PSR
Sbjct: 332 PSR 334
>U40413-2|AAK39174.1| 296|Caenorhabditis elegans Hypothetical
protein C18B2.4 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 6 DLPPPYSSVVGTTHY--GFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 149
D+PPPY + TT Y G P + +VGAY P +P P +P+P
Sbjct: 194 DMPPPYPGIGQTTPYPAGQFQP-VGTVQYQNVGAY-PGQPQQPGQYHPYP 241
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 9 LPP-PYSSVVGTTHYGFVAPALSNPIPDSVGAYP---PAKPFTPPGVYPHPEGVTNATVN 176
LPP P S+V H V L +P+P + P PA+P+ P ++PH T
Sbjct: 191 LPPQPMSTVAPFKHNSPVRRQLVDPLPPLLQPSPVRFPAQPWQIPPLHPHQSTPNPLTQF 250
Query: 177 MQP 185
QP
Sbjct: 251 FQP 253
>Z81460-1|CAB03830.2| 215|Caenorhabditis elegans Hypothetical
protein C04A11.1 protein.
Length = 215
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 LPPPYSSVVGTTHYGFVAPAL-SNPIPDSVGAYPPAKPFTPP 131
LPP Y S V H ++P + S+P+P S A P+ +PP
Sbjct: 163 LPPSYESSV--RHEAMLSPRIHSSPVPTSSNATAPSTSTSPP 202
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 270 CFNCNKIVTTRVTYTTAWHTHLIAGSICLIT--IVCSLCCLGLIPYCFDTFKEAEHYCPN 443
C C V T V Y LI I + ++ LCC+ + ++A H+CPN
Sbjct: 17 CPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYILCCIDI--------RDAIHHCPN 68
Query: 444 CNTFIGKSNK 473
C + + +
Sbjct: 69 CGMVLSRKKR 78
>AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical
protein Y75B7AL.2 protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 354 LITIVCSLCCLGLIPYCFDTFKEAEHYCPNCNTFI 458
L TI + C G+ C D+F H CP C T I
Sbjct: 67 LSTICEYITCQGIEQLCIDSFVPFGHCCPICGTRI 101
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = +3
Query: 252 EPTTLTCFNCNKIVTTRVTYT--TAWHTHLIAGSICLITIVCSLCCLGLIPYCFDTFKEA 425
EP + C C TTR+ W G I LCC + K+
Sbjct: 17 EPYSEYCPKCQCNHTTRMESRRGNCWWIAFFIGFFLFFPICYWLCC--------QSSKDT 68
Query: 426 EHYCPNCNTFI 458
HYCP+C T +
Sbjct: 69 LHYCPSCGTLL 79
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 102 YPPAKPFTPPGVYPHPEG 155
YPP P+ PPG + +P G
Sbjct: 305 YPPGYPYPPPGAFYYPPG 322
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 63 PALSNPIPDSVGAYPPAKPFTPPGVYPHP 149
P P+P G YPP P+ PPG YP+P
Sbjct: 287 PQYPYPVPPH-GYYPPGYPY-PPG-YPYP 312
>AC006794-1|AAK68504.1| 407|Caenorhabditis elegans Hypothetical
protein Y50D4A.3 protein.
Length = 407
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 396 PYCFDTFKEAEHYCPNCNTFIGKSNK 473
PY +D FK A Y P T I +NK
Sbjct: 82 PYSYDAFKIASRYFPEFGTSINVNNK 107
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 3 DDLPPPYSSVVGTTHYGFVA 62
DDLPPP SV G++ YG A
Sbjct: 368 DDLPPPPESVGGSSAYGVFA 387
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +3
Query: 273 FNCNKIVTTRVTYTTAWHTHLIAGS----ICLITIVC-SLCCLGLI--PYCFDTFKEAEH 431
F C + + Y TA+H I G+ I L +++C S CL ++ PY +F
Sbjct: 22 FVCTCLFNAILIYLTAFHVEKITGAYKHLIILFSLICMSFSCLEVLAHPY-LHSFNSGFI 80
Query: 432 YCPNCNTFIGKSNK 473
Y + N ++G S K
Sbjct: 81 YF-SLNDYLGASQK 93
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 9 LPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 149
LPP + G Y + P S +P+ G+ P P PPG HP
Sbjct: 72 LPPRHG--YGQPRYVTIPPTNSYAVPEVGGSMPLICPEGPPGRPGHP 116
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 160 VTPSGWG*TPGGVNGLAGGYAPTESGIGLLSAGATKP*CVVPTTDEYGGG 11
V PSG G GG + GGYA SG G G + + GGG
Sbjct: 183 VAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 160 VTPSGWG*TPGGVNGLAGGYAPTESGIGLLSAGATKP*CVVPTTDEYGGG 11
V PSG G GG + GGYA SG G G + + GGG
Sbjct: 183 VAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +3
Query: 273 FNCNKIVTTRVTYTTAWHTHLIAGS----ICLITIVC-SLCCLGLI--PYCFDTFKEAEH 431
F C + + Y TA+H I G+ I L +++C S CL ++ PY +F
Sbjct: 22 FVCTCLFNAILIYLTAFHVEKITGAYKHLIILFSLICMSFSCLEVLAHPY-LHSFNSGFI 80
Query: 432 YCPNCNTFIGKSNK 473
Y + N ++G S K
Sbjct: 81 YF-SLNDYLGASQK 93
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 VGAYPPAKPFTPPGV-YPHPEGVTNATVNMQPS 188
VG PP P+TP G+ P P+ V +QP+
Sbjct: 394 VGDIPPNTPYTPAGMPQPQPQQQPPQMVQVQPN 426
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 66 ALSNPIPDSVGAYPPAKPFTPPGVYPHPEG 155
A NP GA P +P TPP P P G
Sbjct: 139 APGNPGASGKGAAAPCEPSTPPPCQPCPAG 168
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 408 DTFKEAEHYCPNCNTFIGKSNK 473
D FK YC NC TF G S+K
Sbjct: 87 DIFKS---YCSNCKTFFGMSSK 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,721,376
Number of Sequences: 27780
Number of extensions: 273569
Number of successful extensions: 962
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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