Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o10f
(559 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 68 6e-12
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 53 2e-07
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 51 7e-07
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 51 7e-07
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 50 1e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 48 5e-06
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 48 5e-06
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 46 2e-05
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 45 4e-05
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 45 4e-05
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 45 5e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 44 8e-05
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 43 1e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 43 1e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 39 0.003
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 39 0.003
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.004
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.004
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 37 0.010
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.039
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.069
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 34 0.069
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 33 0.12
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.12
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.21
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 30 1.5
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 1.9
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 29 3.4
SB_13780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_9327| Best HMM Match : DUF1128 (HMM E-Value=9.5) 28 5.9
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 28 5.9
SB_58670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 27 7.9
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 67.7 bits (158), Expect = 6e-12
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Frame = +1
Query: 130 AAETAKLDSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLV 309
A +T DSS D RIVGG + + A P+LA + + G+ CG +L++ + +V
Sbjct: 709 AGDTQLRDSS---DKRFRIVGGREAKAGAWPWLAAIYVK-----GSFRCGGALIARDWVV 760
Query: 310 TAAHC-WFDGRFQANQFVVVLGSN--TLFHGGVR-VTTRQVFVHPQWNPTLLNNDVAMIY 477
TAAHC ++DG+ + +V LG + TL G + V + +HP N L+ DVA+I
Sbjct: 761 TAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQ 820
Query: 478 LPHRVTLNNNIKPIALPNTAD 540
L V L ++ + LP D
Sbjct: 821 LKGGVKLTAYVRTVCLPQPTD 841
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 61.7 bits (143), Expect = 4e-10
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 166 PDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQ 345
P +R++GG + A P+ L + G CG SL+S+ +VTAAHC
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIAL-----KSRGNFICGGSLVSSTWVVTAAHCVARSSNP 525
Query: 346 ANQFVVVLGSNTLFHGGVRVTT---RQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKP 516
A Q+ +++G + V T ++V HPQ+N L+ND+A+I L L++ + P
Sbjct: 526 A-QYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNP 584
Query: 517 IALP 528
+ LP
Sbjct: 585 VCLP 588
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 55.2 bits (127), Expect = 3e-08
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Frame = +1
Query: 127 RAAETAKLDSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRL 306
R + +S+ + RIVGG + A+P+ I G ACG SL+S +
Sbjct: 89 RVCGRTRFNSTRRQQCRQRIVGGHDTVKGAYPWHV-----LIRKGGHVACGGSLISEKWV 143
Query: 307 VTAAHCWF--DGRF-QANQFVVVLGS-NTLFHGGVRVTTR---QVFVHPQWNPTLLNNDV 465
+TAAHC +G ++F V LG T +V R ++ HPQ++ L + D+
Sbjct: 144 LTAAHCVTHRNGNILPRSRFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADL 203
Query: 466 AMIYLPHRVTLNNNIKPIALPNTADLNNL 552
A+I L ++ ++PI LP T D +L
Sbjct: 204 ALIKLDGEAIISEYVRPICLPETDDQASL 232
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +1
Query: 163 QPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRF 342
+P +R+V G + ++ P+ L + G CG SL++ + +VTAAHC D
Sbjct: 25 RPYGTSRVVNGDNAQQHSWPWQISLRVN-----GRHICGGSLIAKDWVVTAAHC-VDRNP 78
Query: 343 QANQFVVVLGS-----NTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNN 507
+ + VV+G+ NT R+ +Q+F H Q++ L ND+A++ L V ++
Sbjct: 79 TPSGYTVVVGAHHRTGNTPVQNTFRL--KQLFKHEQFSMRHLKNDIALLQLHEPVKASDK 136
Query: 508 IKPIALPNT 534
+ + LP++
Sbjct: 137 VNTVCLPSS 145
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHC--WFDGRFQANQ 354
RI+ G+ + N+ P++ IN CG +L+S +VTAAHC N+
Sbjct: 351 RIISGSDAQPNSWPWMVQ-----INYNNGHHCGGTLVSPQWVVTAAHCVDHVKDPKNYNE 405
Query: 355 FVVVLGSN--TLFHGGV-RVTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPIA 522
+ LG + + G R + ++ VHPQ+ PT +NND+A+I L LN +
Sbjct: 406 LAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLAC 465
Query: 523 LPNTAD 540
LP +
Sbjct: 466 LPRQGE 471
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
+RIVGG+ +P A P+ L+ G CG +L++ ++TAAHC D + Q
Sbjct: 629 SRIVGGSTAPPGAWPWQVMLIYNS----GRQFCGGTLVTPEWVITAAHCVVDKNPASIQV 684
Query: 358 VVVLGSNTLFHGGV--RVTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
+ T V R++ R + HP + +P +ND+A++ L L + I +P
Sbjct: 685 RLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMP 744
Query: 529 N 531
N
Sbjct: 745 N 745
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 274 CGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSNTLFHG---GVRVTTRQVFVHPQWNP 444
CG +L++A+ ++TAAHC FD ++ V +G + + G ++ + +FVHPQ+N
Sbjct: 1266 CGGALIAADWVLTAAHC-FDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNS 1324
Query: 445 TLLNNDVAMIYLPHRVTLNNNIKPIAL 525
+ +D+A++ L N+ + PI +
Sbjct: 1325 SSHEHDLAVLQLQQPAEFNSRVSPICI 1351
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 51.2 bits (117), Expect = 6e-07
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
RIVGG + P+ AGL + + CG SL++ +VTAAHC V
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTI---VCGGSLINREWVVTAAHCIDRNNPSRTGCV 488
Query: 361 -------VVLG-SNTLFHGG--VRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRV-TLNNN 507
V+LG S+ H G + Q+ +HP ++ L ND+A+I L + T +
Sbjct: 489 VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKH 548
Query: 508 IKPIALPNTA 537
++P+ LP +A
Sbjct: 549 VRPVCLPTSA 558
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 50.8 bits (116), Expect = 7e-07
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +1
Query: 175 AARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQ 354
+ RIVGG +P NA P+ A L +A G CG +L+ +VTA+HC D + +
Sbjct: 21 STRIVGGTAAPKNAWPWQAQLR----SASGFPFCGGTLVHPRFVVTASHC-IDKK-TPSS 74
Query: 355 FVVVLGSNTLFHGGVRVT----TRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPI 519
+ LG++ G +++ H ++ NP L ND+A+I L LN +
Sbjct: 75 LRIRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLNRAVNLA 134
Query: 520 ALPNTAD 540
LP ++
Sbjct: 135 CLPTQSN 141
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 50.8 bits (116), Expect = 7e-07
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTS-ACGSSLLSANRLVTAAHCWFDGRFQANQF 357
RIVGG + A P+ + T CG S+++ +VTAAHC+ + A +
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSK-DAKDY 161
Query: 358 VVVLGSNTL-FHGGV--RVTTRQVFVHPQWNPTLLNN-DVAMIYLPHRVTLNNNIKPIAL 525
+ +G + L G R ++ +HP++ P ++ DVA+I L + N+ ++P+ L
Sbjct: 162 TIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCL 221
Query: 526 PN 531
P+
Sbjct: 222 PS 223
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 163 QPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRF 342
+PD RIVGG + ++ P+ + + G+ CG SLLS L+TAAHC
Sbjct: 25 RPDGV-RIVGGDEAVPHSWPWQVSIRLK-----GSHICGGSLLSPLWLLTAAHCVIRSNN 78
Query: 343 QANQFVVVLGSNTLFHGGVRVTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPI 519
A+ + V++G++ G + H ++ +D+A+I L T + + P+
Sbjct: 79 SAD-YTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPV 137
Query: 520 ALPNTADL 543
LP DL
Sbjct: 138 CLPKQGDL 145
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLI-TFINAVGTSACGSSLLSANRLVTAAHC--WFDGRFQAN 351
RI GG+ S +P+ L TF + T CG +L++ + ++TAAHC + D +
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPYH 1219
Query: 352 QFVVVLGSN--TLFHGGVRVT---TRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKP 516
V LG + T H V + ++ HP+++ ++D+A+I L + + ++P
Sbjct: 1220 GLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWRTYDSDIALIRLRWKANITEYVRP 1279
Query: 517 IALPN 531
+ LPN
Sbjct: 1280 VCLPN 1284
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +1
Query: 151 DSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWF 330
+ V+P +RIVGG +P N P+ A LL + G CG SL+ ++TAAHC
Sbjct: 20 ECGVKP-GGSRIVGGTEAPINGWPWQAMLLRS---PNGDQFCGGSLIDPGWVLTAAHCLV 75
Query: 331 DGRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNN 507
+ + SN + Q+ H + +P + ND+A++ L + L N
Sbjct: 76 GEQPDSALLGAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNG 135
Query: 508 IKPIALPN 531
+ + L N
Sbjct: 136 VGTVCLAN 143
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +1
Query: 172 NAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQAN 351
+ +RIVGGA + P+ A L T G CG SL+ +N ++TAAHC R
Sbjct: 387 STSRIVGGAAANPGDWPWQAQLRTT----TGFPYCGGSLIHSNWVLTAAHCISSKR--PA 440
Query: 352 QFVVVLGSN----TLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLP--HRVT 495
+ VV LG++ +L + + H +N + ND+A++ LP HR T
Sbjct: 441 EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALLKLPLQHRQT 494
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQA--NQ 354
RIVGG +S P+ LL+ C SL+ A ++TA HC+ D R A ++
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLN-----DRQVCAGSLIEARWIITAGHCFKDPRSSADPDK 107
Query: 355 FVVVLGS----NTLFHGGVRVTTRQVFVHPQWNPTLLNNDVA 468
+ V+LG ++ H +++ VHP++N +N D A
Sbjct: 108 WKVLLGERRRHSSKRHFERAQQVKRIIVHPKFNGKFVNGDFA 149
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
+RI+GG + + P+ A +LI ++ CG +L+ +VTAAHC F + + +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILI-HVDKSWNHRCGGTLIDTEWVVTAAHCVFQ-NIEPSNY 340
Query: 358 VVVLGSN--TLFHGGVRVTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
+ LG++ G + + + +H ++ D+A++ L + + + I P LP
Sbjct: 341 KIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLP 400
Query: 529 NTAD 540
D
Sbjct: 401 GLYD 404
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
ARI+ G NA P+ I+ G CG SL+S +VTAAHC +
Sbjct: 104 ARIING----QNAQPHSWPWQISLRGRSGFHTCGGSLISDRWVVTAAHCIHRNKNPGGYT 159
Query: 358 VVVLGSNTLFHGGVRVTTR--QVFVHPQWNPTLLNNDVAMIYL 480
VVV V+ + R Q+ HP++N + ND+A++ L
Sbjct: 160 VVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLEL 202
Score = 36.7 bits (81), Expect = 0.013
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWF-----DGRF 342
ARI+ G NA P+ I+ G CG SL+S +VTAA GR
Sbjct: 427 ARIING----QNAQPHSWPWQISLRGRSGFHTCGGSLISDRWVVTAAQGIHRNKNPGGRQ 482
Query: 343 QANQFVVVLGS-----NTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYL 480
+ VV+G+ +T +R++ Q+ HP++N + ND+A++ L
Sbjct: 483 NPGGYTVVVGAHKKRGSTSVQQSLRLS--QIIEHPKYNDRRIVNDIALLEL 531
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Frame = +1
Query: 166 PDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQ 345
P +RIVGG +P N+ P+ +++ N T CG SL+ ++T++HC++
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLT-THYCGGSLIDPYWILTSSHCFWTYNNI 298
Query: 346 ANQFVVVLGSNTL--FHGGVRVTT-RQVFVHPQWNPTLL----NNDVAMIYLPHRVTLNN 504
+ QF + LG + + + G + ++++HP L + DVA+I L +
Sbjct: 299 STQFEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHK 358
Query: 505 NIKPIALPN-TADL 543
+ + LP+ TA+L
Sbjct: 359 CVYSVCLPSVTANL 372
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Frame = +1
Query: 163 QPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRF 342
Q + +R++ G + ++A P+ L + CG SL+ + ++TAAHC G
Sbjct: 31 QRPSQSRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHC-VAGIR 89
Query: 343 QANQFVVVLGSNTL---FHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYL--PHRVTLNNN 507
++ V +G++ L +++ +++ H +++ +LL +DVA+I L +RV+ +N
Sbjct: 90 NPRRYSVYVGAHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALIKLSKAYRVSKSNP 149
Query: 508 IK 513
K
Sbjct: 150 AK 151
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
RIVGG +P A P+ A L + G CG +L+ ++TAAHC + R N F
Sbjct: 139 RIVGGTKAPPGAWPWQAMLRSNY----GGQFCGGTLVHPQWVITAAHCVY--RRGPNDFK 192
Query: 361 VVLGSNTLFHGGVRVTTR-----QVFVHPQWN-PTLLNNDVAMIYLPHRVTLNNNI 510
+ +G++ F G T + +V HP ++ PT +D+A+I L +N +
Sbjct: 193 IRMGAH--FRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAV 246
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 262 GTSACGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSNTL-FHGGVRVT--TRQVFVHP 432
G+ CG SL+S +VTAAHC G + VV G + G T +++ HP
Sbjct: 89 GSFICGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHP 147
Query: 433 QWNPTLLNNDVAMIYLPHRVTLNN 504
+N L+ND+A+I L V L++
Sbjct: 148 TYNSPQLSNDIALIELSSPVPLSD 171
Score = 36.3 bits (80), Expect = 0.017
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Frame = +1
Query: 175 AARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQ 354
+ RIVGG + P+ A L T G CG SL+ ++TA HC R +
Sbjct: 661 STRIVGGTAAKQGDWPWQAQLRSTS----GFPFCGGSLIHPQWVLTATHC-VSSRRPTDL 715
Query: 355 FVVVLGSNTLFHGGVR--VTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLN 501
+ + N + G+ + ++ +HP + P L +D+A+I L LN
Sbjct: 716 NIRLGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALIKLLKPANLN 767
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Frame = +1
Query: 175 AARIVGGAISPSNAHPYLAGLLITFINAVGTSA-CGSSLLSANRLVTAAHCWFDGRFQ-A 348
A+RIVGG + P+ A L+ F +G CG +L+ + +VTA+HC D R +
Sbjct: 208 ASRIVGGNDAMHGEWPWQAMLM--FQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDY 265
Query: 349 NQFVVVLGSNT---LFHGGVRVTTRQVFVHPQWN--PTLLNNDVAMIYLPHRVTLNNNIK 513
++ LG + + R+ ++++H +N P NNDVA+I L ++
Sbjct: 266 KTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQ 325
Query: 514 PIAL 525
P+ L
Sbjct: 326 PVCL 329
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
RI+ G + N+ P+ L + G+ CG+SLLS +TAAHC A+ +
Sbjct: 85 RIINGEEAVPNSWPWQLSLRV-----YGSHNCGASLLSPGWALTAAHCVQRSSNPAD-YT 138
Query: 361 VVLGSNTLFHGGVRVTTR--QVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPNT 534
+ G++ + R QV H +++ L NDV ++ L V L++ I I LP
Sbjct: 139 LAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTICLPAH 198
Query: 535 AD 540
D
Sbjct: 199 GD 200
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Frame = +1
Query: 184 IVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFVV 363
+VG SP P+ +L N C L+SA ++TAAHC FD + +Q +V
Sbjct: 1088 LVGATPSPPEDWPWQTMIL----NRRRFPFCSGVLISARHVITAAHC-FDRIIRTDQIIV 1142
Query: 364 VLGSNTLFHG------GVR----VTTRQVFVHPQWN-PTLLNNDVAMIYLPHRVTLNNNI 510
LG+ G G R + + HP + PT ND+A++ L LN +
Sbjct: 1143 RLGAYIARSGRLDWGMGSRWEQEIAVAAIHKHPSYQAPTRWANDIAVLKLARPAILNKRV 1202
Query: 511 KPIALPNTADL 543
+ + N ++
Sbjct: 1203 NVVCMENETNI 1213
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 44.0 bits (99), Expect = 8e-05
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Frame = +1
Query: 154 SSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFD 333
SS RI+GG S HP++ +++ ACG SL+ + +VTAAHC+
Sbjct: 31 SSSTASACRRIMGGQRSTIEQHPWMVAMMLD-----SAQACGGSLVPEDWIVTAAHCFDS 85
Query: 334 GRFQANQFVVVLGSNTLFHGGVRVT-TRQVFVHPQWNPTL-------LNNDVAMIYLPHR 489
R + V+ N + V T ++ HPQ+ + + DVA++ L
Sbjct: 86 NRLRWR----VVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKS 141
Query: 490 VTLNNNIKPIAL 525
V PI L
Sbjct: 142 VATTPKTVPICL 153
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/90 (28%), Positives = 47/90 (52%)
Frame = +1
Query: 262 GTSACGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQWN 441
G+ CG+SLL+ +TAAHC A+ + +V G++ + G ++ H ++
Sbjct: 262 GSHICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFS 320
Query: 442 PTLLNNDVAMIYLPHRVTLNNNIKPIALPN 531
+ NDVA++ L V L++ + I LP+
Sbjct: 321 MVHVRNDVALLKLSTYVQLSDKVGTICLPS 350
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
ARIV G + S++ P++A L N CG++L+ +TAAHC + +++
Sbjct: 324 ARIVNGQEAVSHSWPWIASLRKGRSNY---HTCGATLIRPGWAITAAHC----VMRPDKY 376
Query: 358 VVVLGSNT---LFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
V++GS++ + R+V+ H ++ +D+A++ L +N+ + LP
Sbjct: 377 TVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTACLP 436
Query: 529 N 531
+
Sbjct: 437 S 437
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
+IVGG ++ A P+ + + + CG S++++ +VTAAHC A+++
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGYKTMGHI----CGGSIVNSQWIVTAAHCVTTKPPGASRYT 1837
Query: 361 --------VVLGSNTLFH---GGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNN 507
V LG + L+ + + VHP +N L+ D+A++ L +T N
Sbjct: 1838 MYAFSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSYND--LDYDIALLKLRQPITFNAY 1895
Query: 508 IKPIALPNTA 537
+ + LP A
Sbjct: 1896 VSQVCLPQAA 1905
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +1
Query: 262 GTSACGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQW- 438
G CG SLLS+ ++TAAHC + + V++G++ G + H ++
Sbjct: 336 GHHICGGSLLSSTWVLTAAHCVIRSH-NTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYV 394
Query: 439 NPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTADL 543
+D+A+I L + + P+ LP DL
Sbjct: 395 GGKDKKHDLALIRLAKPAAFSAKVSPVCLPKQGDL 429
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 406 TTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTAD 540
T RQV VHP + ++DVA++ L H TLN + I LP +
Sbjct: 1404 TVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGE 1448
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Frame = +1
Query: 118 KSIRAAETAKLDSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSA 297
KS+ +T V ++R+V G + P+ A L +T V CG SL++
Sbjct: 40 KSLPLVQTNAEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVTPHGFV----CGGSLIAP 95
Query: 298 NRLVTAAHCWFDGRFQANQFVVVLG--SNTLFHGGVRV-TTRQVFVHPQWNPTL-LNNDV 465
++TA HC ++ VVLG G ++ R++ HP ++ + +NDV
Sbjct: 96 QWVLTAGHCILTE--DPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDV 153
Query: 466 AMIYLPHRVTLNNNIKPIALP 528
A++ L + + + + LP
Sbjct: 154 ALLQLSRPAFVTSFVNTVCLP 174
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 160 VQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGR 339
V+P I+GGA + P+ + + + CG +++S ++TAAHC D R
Sbjct: 538 VRPLAMPMIMGGANAEHGEWPWQVSMKLNSSSL--PHICGGNVISPWWVLTAAHCVQDER 595
Query: 340 FQANQFVVVLGSNTLFH-GGVR--VTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNI 510
A+ + +G LF+ G + ++ H ++ ++ D A++ L + +
Sbjct: 596 --ASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYV 653
Query: 511 KPIALPNT 534
+P+ LP++
Sbjct: 654 QPVCLPDS 661
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 39.9 bits (89), Expect = 0.001
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
+RIVGG + A P+ A ++ + N G CG +L+ +VTA+HC +
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYN--GNHFCGGTLVHPRWVVTASHCVH--KLTTGDL 300
Query: 358 VVVLGSN-----TLFHGGVRVTTRQVFVHPQW-NPTLLNNDVAMIYL--PHRVTLNNNIK 513
V +G++ T R+ +++F+HP + +P ND+A++ L P R+ N+
Sbjct: 301 YVRMGAHWKDGKTGSEQDFRI--QRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLA 358
Query: 514 PIALPNTADL 543
+A P ++ L
Sbjct: 359 CLA-PRSSPL 367
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFD 333
RIVGG + A P+ LL+ GT CG SL++ N +VTA HC+ +
Sbjct: 53 RIVGGVEAAPGAWPWQVALLMN-----GTQFCGGSLVNENWVVTARHCFHE 98
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 424 VHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTA 537
+HP ++P ++D+A+I L VT + +KPI LP+ A
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAA 235
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/117 (23%), Positives = 56/117 (47%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
+R+V G + ++ P+ L + G CG SL++ ++TAAHC D +
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRVN-----GRHICGGSLITPEWVLTAAHCVEDFPHPSAHR 133
Query: 358 VVVLGSNTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
+ + R+T ++F H ++ + L NDVA++ L + + ++ + + LP
Sbjct: 134 I---KERSAIQQEFRLT--KLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLP 185
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +1
Query: 175 AARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQ 354
A R++ G+ + P+ A L + + CG SL++ ++TAAHC A++
Sbjct: 29 ATRVISGSEALLGEWPWQAWLHLQHTGFI----CGGSLVAPGWVLTAAHCILSD--DASK 82
Query: 355 FVVVLG--SNTLFHGGVR-VTTRQVFVHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPIA 522
+ VVLG G + + V H + NP NDVA++ L T + + +
Sbjct: 83 YKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLKLRDYPTKTDFVNTVC 142
Query: 523 LPNTAD 540
LP D
Sbjct: 143 LPQYMD 148
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
+ I+GG + P+ L +T V CG +LL++ ++TAA C+ D + +A ++
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYGPV----CGGTLLTSEWVLTAARCFRDNK-RAGEW 310
Query: 358 VVVLGSNTLFHGGVRVTTR 414
V+LG + V TR
Sbjct: 311 KVILGETDFYRKEVSGVTR 329
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
RIVGG + P+ A L T G CG SL++ ++TA HC R QA+ V
Sbjct: 10 RIVGGTAAKHGDWPWQAQLRTTS----GFPYCGGSLIAPQWILTATHC--VERKQASSIV 63
Query: 361 VVLGSN----TLFHGGVRVTTRQVFVHPQWN-PTLLNNDVAMIYL 480
+ LG+ T+ + T+ V HP ++ P ++D+A++ L
Sbjct: 64 IRLGARRRVATVGTEKDYIVTK-VITHPSYHKPKTYSHDIALLKL 107
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 172 NAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHC 324
+ RIVGG +P N P+ A L +A G+ CG SL+ ++TAAHC
Sbjct: 256 SGTRIVGGTEAPVNGWPWQAMLR----SAGGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 172 NAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHC 324
+ RIVGG +P N P+ A L +A G+ CG SL+ ++TAAHC
Sbjct: 216 SGTRIVGGTEAPVNGWPWQAMLR----SAGGSQFCGGSLIHPEWVLTAAHC 262
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCW 327
RIVGG S + A P+ A L F+N CG S++ + +VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAAL---FLNGTH-HRCGGSVIKSQWVVTAAHCF 70
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +1
Query: 175 AARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQ 354
++R+V GA +P +A P+ L G CG SL++ ++TAAHC D
Sbjct: 35 SSRVVNGANAPQHAWPWQISLRTN-----GQHICGGSLITPEWVLTAAHC-VDHYPYPGA 88
Query: 355 FVVVLGSNTLFHGG 396
+ VV+G GG
Sbjct: 89 YTVVVGWGRTVGGG 102
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 172 NAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQAN 351
+ AR++GG + ++ P+ L + G CG +L+S + ++TA HC G+ +
Sbjct: 432 SGARVIGGEDAAPHSWPWQISLRVR-----GKHMCGGTLISPDWVLTAGHC-VHGQLDPS 485
Query: 352 QFVVVLGS 375
+ VV+G+
Sbjct: 486 GYTVVVGT 493
Score = 30.7 bits (66), Expect = 0.84
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 178 ARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQF 357
ARI+ G NA P+ I+ CG +L+S +VTA+HC D +
Sbjct: 844 ARIING----QNAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHCIHDDLNPGSYM 899
Query: 358 VVV 366
VVV
Sbjct: 900 VVV 902
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 412 RQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
+++ +H + LLN DVA+I L VTL + + LP
Sbjct: 580 KRIILHEGYTTNLLN-DVALIQLARPVTLGSKVNTACLP 617
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 403 VTTRQVFVHPQWN-PTLLNNDVAMIYLPHRVTLNNNIKPIALP 528
+ +V +HP + P L +D+A++ L T+NNN+ + LP
Sbjct: 185 IKVSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLP 227
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 34.3 bits (75), Expect = 0.069
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWFDGRFQANQFV 360
R+V G+ + P+ LL + + CG +L+ +VTAAHC F + +
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSF-LHKCGGALIDREWVVTAAHCVFQ-EPDVSHYK 100
Query: 361 VVLGSNTLFHGGVRVTTRQVF------VHPQW-NPTLLNNDVAMIYLPHRVTLNNNIKPI 519
V+LG F+ ++ T Q F +H ++ D+A++ L +N ++ +
Sbjct: 101 VILGD---FNRDIKEPTEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTV 157
Query: 520 ALP 528
LP
Sbjct: 158 CLP 160
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHC 324
RIVGG + N+ P+ A L T G CG SL+ ++TA HC
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRTTS----GFPYCGGSLIHPQWILTATHC 96
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 163 QPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCWF 330
Q + ARIVGG + P+ G+ + CG +L++ ++TAAHC++
Sbjct: 120 QTNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFY 175
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 33.5 bits (73), Expect = 0.12
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Frame = +1
Query: 181 RIVGGAISPSNAHPYLAGLLITFINAVGTSA-CGSSLLSANRLVTAAHCWFDGRFQA--- 348
RIVGG + N+ P+ L++ GT CG SL+ +VT+ HC FD R A
Sbjct: 249 RIVGGREASPNSWPWQVDLVVN-----GTRHNCGGSLIDKQWVVTSGHC-FDQRPYAYIP 302
Query: 349 -NQFVVVLGSN--TLFHGGVRVTT-RQVFVHPQWNPTLL----NNDVAMIYLPHRVTLNN 504
+ + LG + + G + ++F+HP++ L + D+A++ L
Sbjct: 303 LSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYK 362
Query: 505 NIKPIALP 528
+ + LP
Sbjct: 363 RVHSVCLP 370
Score = 32.7 bits (71), Expect = 0.21
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Frame = +1
Query: 265 TSACGSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSN--TLFHGGVRVTT-RQVFVHPQ 435
T CG SL+ ++T++HC++ + QF + LG + G + Q+++HP
Sbjct: 12 THYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPG 71
Query: 436 WNPTLL----NNDVAMIYLPHRVTLNNNIKPIALPN-TADL 543
L + DVA+I L + + + LP+ TA+L
Sbjct: 72 LVVGDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANL 112
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 32.7 bits (71), Expect = 0.21
Identities = 24/99 (24%), Positives = 47/99 (47%)
Frame = +1
Query: 97 NVGIPLAKSIRAAETAKLDSSVQPDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSAC 276
+V IPL + D +P +R++GG + + P+ + + +++ C
Sbjct: 449 SVNIPLPTIRQRLLNFLADCGRRPP-MSRVIGGEAARPYSWPWQVSVSMGKLHS-----C 502
Query: 277 GSSLLSANRLVTAAHCWFDGRFQANQFVVVLGSNTLFHG 393
G +L+S+ ++TAAHC + F + V+ G +F G
Sbjct: 503 GGALISSKWVITAAHCVIEYPF-PQVYEVIAGWGRVFEG 540
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 370 GSNTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPN 531
G++ H G +T ++ HP ++ ++D+A++ L V L +++ I LP+
Sbjct: 21 GAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPS 74
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 367 LGSNTLFHGGVRVTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTADL 543
LGS+ GV++ ++ H ++ + L +D+A+I L L+ + + LP L
Sbjct: 1544 LGSHLRQDDGVQLKIAKIIPHKGYSRSHLRHDIALIKLASPAKLSATVNTVCLPKQGSL 1602
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 380 RCSTVVFVSLLVKFLYILNGIPP 448
RCS+ V VS++ KFL I GIPP
Sbjct: 55 RCSSSVTVSVIKKFLTIKFGIPP 77
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.5 bits (63), Expect = 1.9
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Frame = +1
Query: 166 PDNAARIVGGAISPSNAHPYLAGLLITFINAVGTSACGSSLLSANRLVTAAHCW------ 327
P R+VGG + + P+ LL CG +L+ +VT AHC+
Sbjct: 23 PRRFRRVVGGDEAKAGQFPWQIALLFK-----RQQYCGGALVHERWVVTGAHCFNPYTSE 77
Query: 328 --FDGRFQANQFVVVLGSNTLFHGGVRVTTRQVFVHPQWNPTLLNN----DVAMIYLPHR 489
D ++ + + + GV+ T W + + D+A+I L
Sbjct: 78 DPRDWNVTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRP 137
Query: 490 VTLNNNIKPIAL 525
V N +++PI +
Sbjct: 138 VVFNFHVQPICI 149
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 403 VTTRQVFVHPQWNPT-LLNNDVAMIYLPHRVTLNNNIKPIALPNTAD 540
+ + + +HP + ND+A++ L RV L +++ I LP+ +
Sbjct: 79 ILAKDIILHPNFKSLQTFYNDIALVKLRTRVKLGPSVRTICLPHKGE 125
>SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 399
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 380 RCSTVVFVSLLVKFLYILNGIPP 448
RC++ V VS++ KFL I GIPP
Sbjct: 346 RCTSSVTVSVIKKFLTIKFGIPP 368
>SB_13780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 25 AVLFGIFFVGYTSAYVPVETFYHENVGIPLAKSIRAAET 141
A+L + F+ PV T Y E GI +++S+RA ++
Sbjct: 188 AILISLLFLTTYKLLPPVLTEYQEGYGIVISRSVRAFQS 226
>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4554
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 311 PPPTAGLMAASKLTSSLWFSAQTRCSTV 394
PPPT+ ++ K S +W S+Q R S V
Sbjct: 1255 PPPTSHVIKQLKAASEVWISSQKRPSEV 1282
>SB_9327| Best HMM Match : DUF1128 (HMM E-Value=9.5)
Length = 287
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 189 WWGHFAIKRTSLFGWSSHHLHKRR--RYFGVWIIASFS 296
++GHF + SL SSH K R R++G ++I S
Sbjct: 119 YYGHFIVADASLLRSSSHEFVKLRIPRFYGHFLITDIS 156
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 135 GDCKA*LKCPARQCCKDSWWG 197
G CK + P R CC D+W G
Sbjct: 681 GPCKQPQQNPTRPCCLDTWLG 701
>SB_58670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 439 NPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTADLNNL 552
NP L V + ++P + T+NN+ P +P+ ++ N+
Sbjct: 50 NPPLDELTVQVCHIPWQYTINNSTLPAVVPDVGNVVNV 87
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +1
Query: 403 VTTRQVFVHPQWNPTLLNNDVAMIYLPHRVTLNNNIKPIALPNTADL 543
+ +++F H ++ +D+A++ L LN+ + LP+ D+
Sbjct: 15 IKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSPGDV 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,162,069
Number of Sequences: 59808
Number of extensions: 389639
Number of successful extensions: 910
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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