Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o08r
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 236 2e-61
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 228 4e-59
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 192 2e-48
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 183 1e-45
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 178 5e-44
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 165 3e-40
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 156 3e-37
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 150 1e-35
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 150 2e-35
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 128 6e-29
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 109 4e-23
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 100 2e-20
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 97 2e-19
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 96 3e-19
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 91 1e-17
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 83 3e-15
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 81 9e-15
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 79 5e-14
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 78 8e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 77 2e-13
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 75 1e-12
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 67 2e-10
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 64 1e-09
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 58 1e-07
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 49 4e-05
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 48 1e-04
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 4e-04
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 43 0.003
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 43 0.004
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 43 0.004
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.005
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 42 0.005
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 42 0.009
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 41 0.011
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.026
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 40 0.026
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 40 0.035
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 40 0.035
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 39 0.061
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 38 0.11
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 38 0.14
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 38 0.14
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 37 0.19
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 37 0.24
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 37 0.24
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 37 0.24
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 37 0.24
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.32
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.32
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 36 0.43
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.43
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 36 0.56
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 36 0.56
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 36 0.56
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 35 0.75
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 35 0.75
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 35 0.75
UniRef50_A6E7S2 Cluster: Putative outer membrane protein; n=1; P... 34 1.3
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 34 1.3
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 34 1.3
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 34 1.7
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.3
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 33 2.3
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 33 2.3
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 33 3.0
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 3.0
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 33 3.0
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 3.0
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 33 4.0
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.3
UniRef50_A1AYF3 Cluster: Glucose-methanol-choline oxidoreductase... 32 5.3
UniRef50_Q5AHK3 Cluster: Likely protein kinase; n=2; Candida alb... 32 5.3
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.0
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 7.0
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 7.0
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 32 7.0
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 32 7.0
UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n... 31 9.2
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 31 9.2
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 31 9.2
UniRef50_A3DH51 Cluster: Amidohydrolase; n=1; Clostridium thermo... 31 9.2
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 9.2
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 236 bits (577), Expect = 2e-61
Identities = 114/151 (75%), Positives = 125/151 (82%)
Frame = -2
Query: 453 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 274
L K +TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPF
Sbjct: 40 LGFKTPRETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPF 98
Query: 273 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 94
TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEI
Sbjct: 99 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEI 158
Query: 93 GDIVTIGECRPLSKTS*IQCFESFKGQGLEE 1
GD+VT+GECRPLSKT + KG G ++
Sbjct: 159 GDVVTVGECRPLSKTVRFNVLKVTKGTGAKK 189
Score = 62.5 bits (145), Expect = 4e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = -2
Query: 441 MADQTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 313
MADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 228 bits (558), Expect = 4e-59
Identities = 110/153 (71%), Positives = 127/153 (83%), Gaps = 6/153 (3%)
Frame = -2
Query: 441 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 280
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 279 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 100
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 99 EIGDIVTIGECRPLSKTS*IQCFESFKGQGLEE 1
+IGDIVT+GECRPLSKT + K G ++
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAGTKK 153
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 192 bits (469), Expect = 2e-48
Identities = 87/135 (64%), Positives = 110/135 (81%)
Frame = -2
Query: 453 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 274
+S+++ Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPF
Sbjct: 1 MSTELTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPF 60
Query: 273 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 94
TG VSIRG+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++
Sbjct: 61 TGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQV 119
Query: 93 GDIVTIGECRPLSKT 49
GDIVT+G+CRP+SKT
Sbjct: 120 GDIVTVGQCRPISKT 134
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 183 bits (446), Expect = 1e-45
Identities = 83/135 (61%), Positives = 107/135 (79%)
Frame = -2
Query: 453 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 274
+++++ Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPF 57
Query: 273 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 94
G VSIRGRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR +
Sbjct: 58 VGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INE 116
Query: 93 GDIVTIGECRPLSKT 49
GD+VT+G+CRPLSKT
Sbjct: 117 GDVVTVGQCRPLSKT 131
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 178 bits (433), Expect = 5e-44
Identities = 82/131 (62%), Positives = 101/131 (77%), Gaps = 3/131 (2%)
Frame = -2
Query: 432 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 262
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
S+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIV 153
Query: 81 TIGECRPLSKT 49
G+CRPLSKT
Sbjct: 154 VCGQCRPLSKT 164
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 165 bits (402), Expect = 3e-40
Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 5/133 (3%)
Frame = -2
Query: 432 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 265
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 264 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 88
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGD 124
Query: 87 IVTIGECRPLSKT 49
VT+GECRPLSKT
Sbjct: 125 TVTVGECRPLSKT 137
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 156 bits (378), Expect = 3e-37
Identities = 87/160 (54%), Positives = 104/160 (65%), Gaps = 29/160 (18%)
Frame = -2
Query: 441 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 277
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 276 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 160
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 159 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKT
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKT 159
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 150 bits (364), Expect = 1e-35
Identities = 66/109 (60%), Positives = 82/109 (75%)
Frame = -2
Query: 375 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 196
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 195 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKT 123
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 150 bits (363), Expect = 2e-35
Identities = 68/114 (59%), Positives = 87/114 (76%)
Frame = -2
Query: 390 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 211
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 210 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
RTI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKT 117
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 128 bits (309), Expect = 6e-29
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = -2
Query: 423 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 244
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 67
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 66 RPLSKT 49
RPLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 109 bits (261), Expect = 4e-23
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = -2
Query: 294 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 115
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 114 CFRDVEIGDIVTIGECRPLSKT 49
++GDIV I ECRP+SKT
Sbjct: 83 LL-TCKVGDIVIIAECRPISKT 103
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 100 bits (239), Expect = 2e-20
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Frame = -2
Query: 456 SLSSKMADQTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK 286
S +S M ++ K F L R+ G K R KN+GLGFKTPREAI+G Y+DK
Sbjct: 6 SSTSAMGNRLRKLFLSSLRSSLARRNLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDK 65
Query: 285 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
KCPFTG VSIRGRIL + + +MQ TI++ RDYLH++
Sbjct: 66 KCPFTGTVSIRGRILVWYLPQCEMQSTIIVARDYLHFV 103
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 97.1 bits (231), Expect = 2e-19
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = -2
Query: 363 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 184
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 183 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
Y KY R+E+R + H PC D + GD V I ECRPLSKT
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKT 103
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 96.3 bits (229), Expect = 3e-19
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = -2
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 111 FRDVEIGDIVTIGECRPLSKT 49
DV +GD V I ECRPLSKT
Sbjct: 79 IGDVNVGDSVRIMECRPLSKT 99
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 91.1 bits (216), Expect = 1e-17
Identities = 43/100 (43%), Positives = 58/100 (58%)
Frame = -2
Query: 348 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
KY R+EKR + H C ++GDIVTI ECRP+SKT
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKT 97
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = -2
Query: 342 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 163
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 162 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 83.0 bits (196), Expect = 3e-15
Identities = 41/99 (41%), Positives = 64/99 (64%)
Frame = -2
Query: 348 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSK 52
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAK 125
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 81.4 bits (192), Expect = 9e-15
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = -2
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 111 FRDVEIGDIVTIGECRPLSKT 49
V+ GD+V IGE P+SKT
Sbjct: 84 I-SVKEGDVVVIGETMPISKT 103
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 79.0 bits (186), Expect = 5e-14
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = -2
Query: 348 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
KY R + + VH+ C + ++ GD V ECR L+KT
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKT 98
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 78.2 bits (184), Expect = 8e-14
Identities = 38/100 (38%), Positives = 62/100 (62%)
Frame = -2
Query: 348 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
KYNR+E+R + M V + C +V+ GD V I E RPLSKT
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKT 99
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = -2
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 111 FRDVEIGDIVTIGECRPLSKT 49
+D++ GD V IGE RPLSKT
Sbjct: 76 LKDIKEGDYVLIGETRPLSKT 96
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 74.5 bits (175), Expect = 1e-12
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = -2
Query: 348 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 171 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTS 46
KY R ++ + + PC + +IGDI+TI ECRPL+K S
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGS 98
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -2
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 111 FRDVEIGDIVTIGECRPLSKT 49
V+ GD V + E RPL+K+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKS 100
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -2
Query: 348 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 171 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
K+ R+ + + H+ P DV GD V ECRP++K+
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKS 99
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = -2
Query: 138 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTS*IQCFESFKGQGLEE 1
NMS+H S CFRDV IG IVT+GEC+PLSKT F+ K G ++
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKVTKAVGTKK 79
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 49.2 bits (112), Expect = 4e-05
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 69 CRPLSKT 49
R LSKT
Sbjct: 62 SRKLSKT 68
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = -2
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 63 PLSKT 49
PLSKT
Sbjct: 64 PLSKT 68
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 69 CRPLSKT 49
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 4e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -2
Query: 246 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 67
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 66 RPLSKT 49
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = -2
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 81 TIGECRPLSKT 49
E +SKT
Sbjct: 62 ECAESLKISKT 72
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 69 CRPLSK 52
C P+SK
Sbjct: 62 CAPISK 67
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = -2
Query: 264 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 84 VTIGECRPLSK 52
+ I ECRP+SK
Sbjct: 59 IEIVECRPISK 69
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.005
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = -2
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 81 TIGECRPLSKT 49
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 42.3 bits (95), Expect = 0.005
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = -2
Query: 249 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 75 GECRPLSK 52
ECRPLSK
Sbjct: 61 VECRPLSK 68
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 41.5 bits (93), Expect = 0.009
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = -2
Query: 249 RILTGVVQKMKMQR--TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
++LTGVV KMQ+ T+++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 75 GECRPLSK 52
E RP+SK
Sbjct: 60 IESRPISK 67
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 41.1 bits (92), Expect = 0.011
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = -2
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 75 GECRPLSKT 49
RPLSKT
Sbjct: 65 VGTRPLSKT 73
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 39.9 bits (89), Expect = 0.026
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +1
Query: 28 FKTLNLTGFGQRSAFADRYNITNLHVPEARRQMYGHVPVPFLEPIVFG*VVKVIXXXXXX 207
F+ + F S + NIT + E+ R + ++ V F ++F V++VI
Sbjct: 62 FQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDNDG 120
Query: 208 XXXXXXXXXXGEDAAADRNVASEGTLLVNVGTLNRLSGSFE 330
G+D +D N SE T VNV T N FE
Sbjct: 121 TVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 39.9 bits (89), Expect = 0.026
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = -2
Query: 258 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 79
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 78 IGECRPLSK 52
ECRPLSK
Sbjct: 64 AIECRPLSK 72
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 39.5 bits (88), Expect = 0.035
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
+ R + GVV M +++V+ + PKY +F ++ + H +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAH--DADNACGVGDRVTI 64
Query: 75 GECRPLSK 52
EC P SK
Sbjct: 65 SECTPFSK 72
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 39.5 bits (88), Expect = 0.035
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = -2
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 63 PLSKT 49
PLSKT
Sbjct: 75 PLSKT 79
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 38.7 bits (86), Expect = 0.061
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 252 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 75 GECRPLS 55
P+S
Sbjct: 82 KSMLPIS 88
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 37.9 bits (84), Expect = 0.11
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -2
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 63 PLSK 52
PLSK
Sbjct: 74 PLSK 77
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 37.5 bits (83), Expect = 0.14
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 69 CRPLSK 52
C P+SK
Sbjct: 62 CAPISK 67
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 37.5 bits (83), Expect = 0.14
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 69 CRPLSK 52
RPLSK
Sbjct: 67 TRPLSK 72
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 37.1 bits (82), Expect = 0.19
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -2
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 57 SKT 49
S+T
Sbjct: 69 SRT 71
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 36.7 bits (81), Expect = 0.24
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = -2
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 57 SK 52
SK
Sbjct: 74 SK 75
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.7 bits (81), Expect = 0.24
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 69 CRPLSK 52
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 36.7 bits (81), Expect = 0.24
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -2
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 57 SK 52
SK
Sbjct: 71 SK 72
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 36.7 bits (81), Expect = 0.24
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEE--NIAGIGDLVRIEE 72
Query: 69 CRPLSK 52
RPLSK
Sbjct: 73 TRPLSK 78
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 36.3 bits (80), Expect = 0.32
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -2
Query: 255 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 84 VTIGECRPLSKTS*IQCFESFKGQGLE 4
V I +CRP+SKT E QG E
Sbjct: 67 VRIEQCRPISKTKHFAVAEIKSAQGQE 93
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.3 bits (80), Expect = 0.32
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 73
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 72 ECRPLSKTS*IQCFESFKGQG 10
ECRP+SKT + E + +G
Sbjct: 76 ECRPISKTKHFRLVEVLQKKG 96
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 35.9 bits (79), Expect = 0.43
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -2
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 63 PLSKT 49
SKT
Sbjct: 84 HFSKT 88
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.43
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -2
Query: 321 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 142
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 141 RNMS 130
R S
Sbjct: 159 RGKS 162
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 35.5 bits (78), Expect = 0.56
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 237 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 63 PLSK 52
P+SK
Sbjct: 75 PISK 78
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 35.5 bits (78), Expect = 0.56
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DP-DNQFKVGDVVELQP 90
Query: 69 CRPLSKT 49
RP+SKT
Sbjct: 91 SRPISKT 97
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 35.5 bits (78), Expect = 0.56
Identities = 23/72 (31%), Positives = 39/72 (54%)
Frame = -2
Query: 264 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 84 VTIGECRPLSKT 49
+ I E RPLSKT
Sbjct: 57 ILINETRPLSKT 68
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 35.1 bits (77), Expect = 0.75
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 387 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQR 208
R G +R+D + H N G RE + GT+ K TG S G +TG +
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCH 98
Query: 207 TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 97
++ + + + RHR+ H + D E
Sbjct: 99 MDAQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 35.1 bits (77), Expect = 0.75
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 69 CRPLSKT 49
P+S T
Sbjct: 71 HIPISAT 77
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 35.1 bits (77), Expect = 0.75
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 75 GECRPLSKT 49
ECRP+SKT
Sbjct: 66 EECRPISKT 74
>UniRef50_A6E7S2 Cluster: Putative outer membrane protein; n=1;
Pedobacter sp. BAL39|Rep: Putative outer membrane protein
- Pedobacter sp. BAL39
Length = 1110
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 19 FETFKTLNLTGFGQRSAFADRYNITNLHVPEARRQMYGHVPVPFLEP 159
F + L+L G+G S+F +Y ITN+ + R ++ H VP ++P
Sbjct: 1032 FIKLRELSL-GYGIPSSFLQKYRITNMSISLVGRNLWVHSKVPHIDP 1077
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.3 bits (75), Expect = 1.3
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 69 CRPLSKT 49
RP+SKT
Sbjct: 69 TRPVSKT 75
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 34.3 bits (75), Expect = 1.3
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -2
Query: 255 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 81 TIGECRPLSKT 49
I E RPLSKT
Sbjct: 65 KIRETRPLSKT 75
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -2
Query: 246 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 67
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 66 RPLSKT 49
RP+SKT
Sbjct: 71 RPISKT 76
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 198 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 33.5 bits (73), Expect = 2.3
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 69 CRPLSK 52
PLSK
Sbjct: 62 SEPLSK 67
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 33.5 bits (73), Expect = 2.3
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = -2
Query: 288 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 109
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 108 RDVEIGDIVTIGECRPLSKT 49
IGD V++ E RPLS T
Sbjct: 105 --AGIGDRVSLMETRPLSAT 122
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 33.1 bits (72), Expect = 3.0
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 69 CRPLSK 52
C P SK
Sbjct: 62 CPPKSK 67
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 33.1 bits (72), Expect = 3.0
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = -2
Query: 426 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 247
+K F T F KGG+ K++ L +K E+I G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 246 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 145
G + M+ T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -2
Query: 399 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 235
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 234 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 148
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -2
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 57 SKT 49
SKT
Sbjct: 66 SKT 68
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.1 bits (72), Expect = 3.0
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -2
Query: 243 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 69 CRPLSKT 49
CRP+SKT
Sbjct: 60 CRPISKT 66
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -2
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 81 TIGECRPLSKT 49
+ E P+SKT
Sbjct: 66 LMTEVAPISKT 76
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 5.3
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 426 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 247
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 246 IL 241
IL
Sbjct: 68 IL 69
>UniRef50_A1AYF3 Cluster: Glucose-methanol-choline oxidoreductase
precursor; n=1; Paracoccus denitrificans PD1222|Rep:
Glucose-methanol-choline oxidoreductase precursor -
Paracoccus denitrificans (strain Pd 1222)
Length = 571
Score = 32.3 bits (70), Expect = 5.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 19 FETFKTLNLTGFGQRSAFADRYNITNLHVPEARRQMYGHV 138
F T K L L+G G + AD T +H PE R + H+
Sbjct: 321 FNTPKLLMLSGIGDEAHLADHGIDTRMHAPEVGRNVQDHI 360
>UniRef50_Q5AHK3 Cluster: Likely protein kinase; n=2; Candida
albicans|Rep: Likely protein kinase - Candida albicans
(Yeast)
Length = 339
Score = 32.3 bits (70), Expect = 5.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 19 FETFKTLNLTGFGQRSAFADRYNITNLHVPEARRQMY 129
FE F T NLT F + F D YN NLH + Q Y
Sbjct: 260 FENFGTPNLTDF-EDELFCDEYNNENLHFKKFNLQKY 295
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 183 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 7.0
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 389 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 270
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 7.0
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -2
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 31.9 bits (69), Expect = 7.0
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 69 CRPLSKT 49
RPLS T
Sbjct: 66 TRPLSAT 72
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -2
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 69 CRPLSK 52
+P+SK
Sbjct: 62 SKPISK 67
>UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to papilin -
Nasonia vitripennis
Length = 2437
Score = 31.5 bits (68), Expect = 9.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 183 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
L+ +P+ RF RHR + +PC ++E D+ G+C P+
Sbjct: 127 LNCMPRGERFFYRHRESVIDGTPC--NIEKNDVCVEGKCMPV 166
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 31.5 bits (68), Expect = 9.2
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = -2
Query: 294 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 127
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 126 HLSPCFRDVEIGDIVTIGE-CRPLSKT 49
LS C +E D+ E C L+ T
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANT 401
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 354 HHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 205
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_A3DH51 Cluster: Amidohydrolase; n=1; Clostridium
thermocellum ATCC 27405|Rep: Amidohydrolase -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 393
Score = 31.5 bits (68), Expect = 9.2
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -2
Query: 369 RKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 190
R+D+ HKN LGF R + + K F+ ++ + GV++ + +TI IR
Sbjct: 21 RRDI--HKNPELGFNEYRTSSIASDFMKNLGFSVRTNVAKTGVVGVLEGERPGKTIAIRA 78
Query: 189 DYLHYLP--KYNRFEKRHRNMSVHLSPCFRDVEI 94
D + +P + N FE +N +V + C D I
Sbjct: 79 D-MDAIPIAEENDFEYASQNKNV-MHACGHDAHI 110
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 31.5 bits (68), Expect = 9.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 121
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,471,213
Number of Sequences: 1657284
Number of extensions: 9082166
Number of successful extensions: 22639
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 21994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22573
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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