Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o08f
(503 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 229 2e-60
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 229 2e-60
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 214 5e-56
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro... 31 0.67
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P... 31 0.67
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P... 31 0.67
M31162-1|AAA28859.1| 448|Drosophila melanogaster protein ( D.me... 28 6.2
AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p pro... 28 6.2
AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p pro... 28 6.2
AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA... 28 6.2
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 229 bits (559), Expect = 2e-60
Identities = 112/142 (78%), Positives = 124/142 (87%), Gaps = 3/142 (2%)
Frame = +2
Query: 23 MADQTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 193
MADQ E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 194 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 373
G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE G
Sbjct: 61 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120
Query: 374 DIVTIGECRPLSKTVRFNVLKV 439
DIVTIGECRPLSKTVRFNVLKV
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 229 bits (559), Expect = 2e-60
Identities = 112/142 (78%), Positives = 124/142 (87%), Gaps = 3/142 (2%)
Frame = +2
Query: 23 MADQTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 193
MADQ E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+T
Sbjct: 1 MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60
Query: 194 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 373
G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE G
Sbjct: 61 GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120
Query: 374 DIVTIGECRPLSKTVRFNVLKV 439
DIVTIGECRPLSKTVRFNVLKV
Sbjct: 121 DIVTIGECRPLSKTVRFNVLKV 142
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 214 bits (523), Expect = 5e-56
Identities = 104/141 (73%), Positives = 120/141 (85%), Gaps = 2/141 (1%)
Frame = +2
Query: 23 MADQ-TEKAFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 196
MADQ TE++F+KQ A V + RK +K R ++ +GLGF+ P EAI+GTYIDKKCP+TG
Sbjct: 1 MADQQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTG 60
Query: 197 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 376
+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GD
Sbjct: 61 DVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGD 120
Query: 377 IVTIGECRPLSKTVRFNVLKV 439
IVTIGECRPLSKTVRFNVLKV
Sbjct: 121 IVTIGECRPLSKTVRFNVLKV 141
>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 203 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 343
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
isoform B protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 203 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 343
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
isoform A protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 203 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 343
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>M31162-1|AAA28859.1| 448|Drosophila melanogaster protein (
D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
gene, complete cds. ).
Length = 448
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +1
Query: 16 KQNGGSDRESVSETGHRFPEQERWHEEEGHASP*ECWFRLQNSQRGD*GYLH*QEVSLHW 195
K+ RE S R ++ER E G S + R + + D + + V +
Sbjct: 323 KKKRSKSRERESSRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGY 382
Query: 196 QRFDXXXXXXXXXSEDEDAENYRDPP 273
FD +DED E YR PP
Sbjct: 383 PTFDYQNATIKREIDDEDEEKYRPPP 408
>AY089622-1|AAL90360.1| 448|Drosophila melanogaster RE35772p
protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +1
Query: 16 KQNGGSDRESVSETGHRFPEQERWHEEEGHASP*ECWFRLQNSQRGD*GYLH*QEVSLHW 195
K+ RE S R ++ER E G S + R + + D + + V +
Sbjct: 323 KKKRSKSRERESSRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGY 382
Query: 196 QRFDXXXXXXXXXSEDEDAENYRDPP 273
FD +DED E YR PP
Sbjct: 383 PTFDYQNATIKREIDDEDEEKYRPPP 408
>AY061501-1|AAL29049.1| 448|Drosophila melanogaster LD46049p
protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +1
Query: 16 KQNGGSDRESVSETGHRFPEQERWHEEEGHASP*ECWFRLQNSQRGD*GYLH*QEVSLHW 195
K+ RE S R ++ER E G S + R + + D + + V +
Sbjct: 323 KKKRSKSRERESSRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGY 382
Query: 196 QRFDXXXXXXXXXSEDEDAENYRDPP 273
FD +DED E YR PP
Sbjct: 383 PTFDYQNATIKREIDDEDEEKYRPPP 408
>AE014134-1210|AAF52471.1| 448|Drosophila melanogaster CG8749-PA
protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +1
Query: 16 KQNGGSDRESVSETGHRFPEQERWHEEEGHASP*ECWFRLQNSQRGD*GYLH*QEVSLHW 195
K+ RE S R ++ER E G S + R + + D + + V +
Sbjct: 323 KKKRSKSRERESSRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGY 382
Query: 196 QRFDXXXXXXXXXSEDEDAENYRDPP 273
FD +DED E YR PP
Sbjct: 383 PTFDYQNATIKREIDDEDEEKYRPPP 408
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,139,309
Number of Sequences: 53049
Number of extensions: 451006
Number of successful extensions: 992
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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