Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o04f
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 220 2e-56
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 211 8e-54
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 188 6e-47
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 177 1e-43
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 173 3e-42
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 4e-42
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 169 3e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 168 7e-41
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 162 5e-39
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 162 6e-39
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 148 8e-35
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 142 7e-33
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 139 5e-32
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 138 1e-31
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 136 5e-31
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 128 7e-29
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 109 3e-23
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 90 3e-17
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 85 2e-15
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 80 4e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 73 5e-12
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 69 8e-11
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 66 6e-10
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 60 3e-08
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 60 5e-08
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 51 2e-05
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 49 7e-05
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 49 9e-05
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 5e-04
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 45 0.001
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.17
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.30
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.69
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 0.91
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.91
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 2.1
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 2.8
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 34 2.8
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.8
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 34 2.8
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 3.7
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 4.9
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 4.9
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 33 6.4
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 6.4
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 33 6.4
UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 6.4
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 8.5
UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1; ... 32 8.5
UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory c... 32 8.5
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 32 8.5
UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11; Eur... 32 8.5
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 220 bits (538), Expect = 2e-56
Identities = 103/160 (64%), Positives = 117/160 (73%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 454
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 455 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
++GH IE++PELPLVV DKV+
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVE 159
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 211 bits (516), Expect = 8e-54
Identities = 100/163 (61%), Positives = 118/163 (72%)
Frame = +2
Query: 89 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 268
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 269 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 448
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 449 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE 577
Q++GH+I+ + E PLVV+D+VQ+
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 188 bits (459), Expect = 6e-47
Identities = 90/158 (56%), Positives = 103/158 (65%)
Frame = +2
Query: 104 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 283
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 284 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 463
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 464 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE 577
ARGH I ++ E+PLV+ +V E
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFE 159
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 177 bits (432), Expect = 1e-43
Identities = 87/157 (55%), Positives = 101/157 (64%)
Frame = +2
Query: 104 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 283
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 284 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 463
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 464 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
+RGH I +PE+PLVV D +Q
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQ 158
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 173 bits (421), Expect = 3e-42
Identities = 83/160 (51%), Positives = 102/160 (63%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 454
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 455 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
ARGH I +PELPLV+++++Q
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQ 160
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 4e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 122 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 301
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 302 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 433
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 169 bits (412), Expect = 3e-41
Identities = 82/156 (52%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 110 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 286
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 287 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 466
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 467 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
ARGH I ++P++PLVV DK++
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIE 160
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 168 bits (409), Expect = 7e-41
Identities = 77/158 (48%), Positives = 100/158 (63%)
Frame = +2
Query: 101 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 280
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 281 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 460
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 461 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
+RGH +E +PELPLV+ D ++
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTME 158
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 162 bits (394), Expect = 5e-39
Identities = 77/157 (49%), Positives = 98/157 (62%)
Frame = +2
Query: 107 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 286
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 287 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 466
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 467 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE 577
+RGH IE + E+P+VV D +++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQ 159
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 162 bits (393), Expect = 6e-39
Identities = 78/160 (48%), Positives = 97/160 (60%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 454
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 455 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
ARGH I + E+PLV ++ ++
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIE 159
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 148 bits (359), Expect = 8e-35
Identities = 71/155 (45%), Positives = 93/155 (60%)
Frame = +2
Query: 113 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 292
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 293 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 472
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 473 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE 577
ARGH I+ +PELPLVV+D V++
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQ 160
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 142 bits (343), Expect = 7e-33
Identities = 65/137 (47%), Positives = 82/137 (59%)
Frame = +2
Query: 167 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 346
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 347 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 526
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 527 IEKIPELPLVVADKVQE 577
++ IPE+P V+ D +++
Sbjct: 139 VKTIPEIPFVIEDSIEK 155
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 139 bits (336), Expect = 5e-32
Identities = 71/155 (45%), Positives = 91/155 (58%)
Frame = +2
Query: 104 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 283
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 284 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 463
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 464 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK 568
ARGH I +P++PLVV K
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSK 157
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 138 bits (333), Expect = 1e-31
Identities = 69/152 (45%), Positives = 84/152 (55%)
Frame = +2
Query: 116 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 295
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 296 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 475
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 476 XXXXXXXXXXXQARGHIIEKIPELPLVVADKV 571
+ARGH I + LP++V+D +
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDI 155
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 136 bits (328), Expect = 5e-31
Identities = 59/110 (53%), Positives = 71/110 (64%)
Frame = +2
Query: 233 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 412
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 413 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVA 562
K WR+WH ARGH + +PE+PLV++
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVIS 131
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 128 bits (310), Expect = 7e-29
Identities = 62/159 (38%), Positives = 93/159 (58%)
Frame = +2
Query: 101 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 280
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 281 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 460
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 461 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE 577
QARGH++ ++ E+P+VV D VQE
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQE 157
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 109 bits (263), Expect = 3e-23
Identities = 61/150 (40%), Positives = 73/150 (48%)
Frame = +2
Query: 110 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 289
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 290 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 469
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 470 XXXXXXXXXXXXXQARGHIIEKIPELPLVV 559
+ARGH I +P +PLVV
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV 144
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 90.2 bits (214), Expect = 3e-17
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Frame = +2
Query: 110 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 289
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 290 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 466
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 467 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
+ RGH+I+ +P LP+VV D+++
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELK 153
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 84.6 bits (200), Expect = 2e-15
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +2
Query: 269 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 448
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 449 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVV 559
+RGH ++ + P+++
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMII 155
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 79.8 bits (188), Expect = 4e-14
Identities = 46/136 (33%), Positives = 62/136 (45%)
Frame = +2
Query: 170 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 349
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 350 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 529
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 530 EKIPELPLVVADKVQE 577
EK+P LP+VV ++
Sbjct: 162 EKVPSLPVVVVGDAEK 177
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 200 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 346
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 72.9 bits (171), Expect = 5e-12
Identities = 42/153 (27%), Positives = 71/153 (46%)
Frame = +2
Query: 116 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 295
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 296 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 475
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 476 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
+ RGH + ++ ++P V+ D+++
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIE 149
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 68.9 bits (161), Expect = 8e-11
Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +2
Query: 149 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 322
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 323 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 502
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 503 XXQARGHIIEKIPELPLVVADKVQ 574
RGHII+ I ELP+V++D ++
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIE 154
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 66.1 bits (154), Expect = 6e-10
Identities = 39/135 (28%), Positives = 59/135 (43%)
Frame = +2
Query: 167 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 346
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 347 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 526
SG+ A GGR+ P ++ +ARGH+
Sbjct: 82 --NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 527 IEKIPELPLVVADKV 571
+ P+VV D +
Sbjct: 140 FKDSVRFPIVVTDDI 154
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.5 bits (140), Expect = 3e-08
Identities = 38/101 (37%), Positives = 51/101 (50%)
Frame = +2
Query: 113 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 292
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 293 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 415
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 59.7 bits (138), Expect = 5e-08
Identities = 38/136 (27%), Positives = 58/136 (42%)
Frame = +2
Query: 167 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 346
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 347 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 526
+ GGR P KP R+W + R H+
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 527 IEKIPELPLVVADKVQ 574
E ELP VV+++++
Sbjct: 133 FE--GELPKVVSNELE 146
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 51.2 bits (117), Expect = 2e-05
Identities = 41/147 (27%), Positives = 55/147 (37%), Gaps = 9/147 (6%)
Frame = +2
Query: 152 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 331
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 332 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 484
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 485 XXXXXXXXQARGHIIEKIPELPLVVAD 565
ARGH +E +PE+PLVV D
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDD 159
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 49.2 bits (112), Expect = 7e-05
Identities = 37/137 (27%), Positives = 57/137 (41%)
Frame = +2
Query: 167 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 346
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 347 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 526
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 527 IEKIPELPLVVADKVQE 577
++ E+P+VV+D ++
Sbjct: 131 FDR-DEVPVVVSDDFED 146
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 48.8 bits (111), Expect = 9e-05
Identities = 42/152 (27%), Positives = 54/152 (35%), Gaps = 7/152 (4%)
Frame = +2
Query: 140 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 298
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 299 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 478
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 479 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
RGH E P+++ V+
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVE 187
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +1
Query: 292 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 447
++G+R C SA W VR C+R HV WW +VR E L LAP QP
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 44.8 bits (101), Expect = 0.001
Identities = 37/153 (24%), Positives = 62/153 (40%)
Frame = +2
Query: 116 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 295
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 296 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 475
G ++R+PR+ GG A GG+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAV-----GGKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 476 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQ 574
+ RGH ++ +LP+VV D V+
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVE 150
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.17
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 411 VGANIRPPRHMLPKAP*P 358
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.30
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 514 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 413
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.69
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 317 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 400
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 0.91
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 374 RRHPDRTYGYHHHGHAEFGQQHVR-YP 297
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.91
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 317 ARIPRVRGGGTHRSGQGAFGNMCRGG 394
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 389 HDTCYRRHPDRTYGYHHHGHAEFG 318
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 401 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 288
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 389 HDTCYRRHPDRTYGYHHHGHAEFGQQH 309
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 33.9 bits (74), Expect = 2.8
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 512 ARGHIIEKIPELPLVVADKVQ 574
ARGH IE +PELPLV+ D +
Sbjct: 2 ARGHRIESVPELPLVIGDSAE 22
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 287 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 397
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 33.9 bits (74), Expect = 2.8
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +2
Query: 515 RGHIIEKIPELPLVVADKVQE 577
RG++++ + E+PLVV+DK+QE
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQE 25
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 3.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 390 PRHMLPKAP*PDLWVPPPR 334
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 4.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 392 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 312
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 4.9
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 98 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 271
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 272 GHQTSAESWGTGRAVARIPR 331
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.1 bits (72), Expect = 4.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 401 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQP 267
TY+ H Y +HP T+ YHH H + ++ ++P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 389 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 261
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 392 HHDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 261
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 512 ARGHIIEKIPELPLVVADKVQ 574
++GH I ++PELPLVV DKV+
Sbjct: 2 SKGHRIGEVPELPLVVEDKVE 22
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 398 YVHHD-TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 285
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 420 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLL 530
GG GTV +T +G RP PL+LLAS + + +T+L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVL 181
>UniRef50_Q05TV6 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. RS9916|Rep: Putative uncharacterized
protein - Synechococcus sp. RS9916
Length = 143
Score = 32.7 bits (71), Expect = 6.4
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 265 GGWSPNQCRIMG--YRTCCCPNSACPWWWY 348
GGW P CR Y + C PWWW+
Sbjct: 54 GGWVPAYCRDQPDQYSSGSCYGGGVPWWWW 83
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 6.4
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 152 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 319
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 320 RIPRVRGGGTHRSGQG 367
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 6.4
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 233 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 400
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 8.5
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 104 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPD---LVNDVHVSMSKNSRQPYCVSKEAG 274
ARP ++ Y + G ++PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 275 HQTSAESWGTGRAVARIPRVRGGGTH 352
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_UPI000023E72B Cluster: hypothetical protein FG04675.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04675.1 - Gibberella zeae PH-1
Length = 285
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 411 VGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALV 280
V A IRP H L K P PD+W+ P T+ + + A H S +
Sbjct: 163 VQAQIRPD-HTLFKPPVPDMWLDPEHTKAVLSGAGLDVHTSTAI 205
>UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory
cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator
protein 1) (TKA-1) (SRY-interacting protein 1) (SIP- 1)
(Solute carrier family 9 isoform A3 regulatory factor 2)
(NHE3 kinase A regulatory protein E3KARP)
(Sodium-hydroge; n=2; Danio rerio|Rep: Na(+)/H(+)
exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine
kinase activator protein 1) (TKA-1) (SRY-interacting
protein 1) (SIP- 1) (Solute carrier family 9 isoform A3
regulatory factor 2) (NHE3 kinase A regulatory protein
E3KARP) (Sodium-hydroge - Danio rerio
Length = 385
Score = 32.3 bits (70), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 380 CYRRHPDRTYGYHHHGHAEFGQQHVR 303
CY DR YG+H HG G Q++R
Sbjct: 10 CYLTKGDRGYGFHLHGERNRGAQYIR 35
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 393 PPRHMLPKAP*PDLWV--PPPRTRGIRATARPVP 298
PP LP P PD +V PPP+ G A PVP
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVP 385
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 176 RTGGA-WLHPAPSHSSLNTPTLKVGLPIDSFRYFSEAIPP 60
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A2R4J7 Cluster: Similarity to other proteins; n=11;
Eurotiomycetidae|Rep: Similarity to other proteins -
Aspergillus niger
Length = 1372
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 405 ANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSA 286
AN P + P + P + VPPP + ATA P P +A
Sbjct: 635 ANQTPNNYPQPTSTTPSVQVPPPAAAAVAATASPAPAPAA 674
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,086,343
Number of Sequences: 1657284
Number of extensions: 12714602
Number of successful extensions: 45166
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 41731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44777
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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