Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o03r
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9NLA0 Cluster: Cnox2-Pc; n=1; Podocoryne carnea|Rep: C...    36   0.84 
UniRef50_A6LEC0 Cluster: OmpA-related protein; n=1; Parabacteroi...    33   4.5  
UniRef50_Q55GA2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q97LL0 Cluster: Predicted metal-dependent hydrolase; n=...    33   5.9  
UniRef50_Q8IE71 Cluster: Putative uncharacterized protein PF13_0...    33   5.9  
UniRef50_Q5UR84 Cluster: Putative F-box protein R637; n=1; Acant...    33   5.9  

>UniRef50_Q9NLA0 Cluster: Cnox2-Pc; n=1; Podocoryne carnea|Rep:
           Cnox2-Pc - Podocoryne carnea
          Length = 190

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +2

Query: 35  IPVQSNAGSNEIKTSSEY--AMKRHFNTTPIFLFNLVTLSVEWHSNGDCCI----KKKKT 196
           +PV+   G + I T  EY  +  R++N  P +   +VT +        CC+      +K+
Sbjct: 36  LPVRPTIGIDHICTEKEYDRSYYRYYNYYPRYDKRIVTCT------NTCCMGFSSAVRKS 89

Query: 197 VASNVPKHIHFHLPSNTFNKYF 262
            A + P H ++H P   +N YF
Sbjct: 90  CAPHYPSHNYYHTPVEQYNDYF 111


>UniRef50_A6LEC0 Cluster: OmpA-related protein; n=1; Parabacteroides
           distasonis ATCC 8503|Rep: OmpA-related protein -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 1117

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +2

Query: 407 YVRQNKSINAILRLPNLKKYLFDQIERNPGEKVTSITHTEGREISCGKKWFNNNNPELDC 586
           Y   N + +A + L  L  +L D++  NPG+   + T+T+   I+    W  N+N  L  
Sbjct: 305 YTTANSAADATV-LQGLSDFLGDELGYNPGKFDVNKTNTQADRITARLDWNINSNNVLSL 363

Query: 587 RVSLTKTHHTGRSDT 631
           +    K+ +T    T
Sbjct: 364 KYYYLKSFNTNNPST 378


>UniRef50_Q55GA2 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 978

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +2

Query: 131  NLVTLSVEWHSNGDCCIKKKKTVASNVPKHIHF---HLPSNTFNKYF 262
            NL T++ E    GD C K KK +A N+ K + F   H PS +F K F
Sbjct: 881  NLKTITFENPGGGDRCSKPKKVIA-NILKSVSFQAQHFPSLSFIKIF 926


>UniRef50_Q97LL0 Cluster: Predicted metal-dependent hydrolase; n=1;
           Clostridium acetobutylicum|Rep: Predicted
           metal-dependent hydrolase - Clostridium acetobutylicum
          Length = 144

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -2

Query: 606 VFVKDTLQSSSGLLLLNHFLPQEISRPSVWVIEVTFS-PGFLSIWSNKYFFKLGSLKIAF 430
           +F+KD L  S    +L+H L   +  P +     TFS  G     +N + FKL ++K   
Sbjct: 58  IFIKDNLPLSLEKFILSHELGHALCNPDLLCAAFTFSNKGKFERQANYFAFKLINIKFDE 117

Query: 429 IDLF*RTYYYLTSKTKVLY 373
           I+L   +   + + T++ Y
Sbjct: 118 IELEGMSLEQIAALTQIPY 136


>UniRef50_Q8IE71 Cluster: Putative uncharacterized protein
           PF13_0139; n=2; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0139 - Plasmodium falciparum (isolate 3D7)
          Length = 1661

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
 Frame = +2

Query: 11  INQHISDGIPVQSNAGSNEIKT-SSEYAMKRHFNTTPIFLFNLVTLSVEWHSNGDCCIKK 187
           I +HI+D I +++N   N +K  SS Y  K+       +LF+L+ +S      G+   KK
Sbjct: 739 IGEHINDDI-IKNN--KNHLKNISSNYLTKQGKKYN--YLFHLLHMSTRKKKVGEKKKKK 793

Query: 188 KKTV-ASNV---PKHIHFHLPSNTFNKYF*LYHLQES 286
           KK +  +N+    + IH     N FNK   +YH+QE+
Sbjct: 794 KKKIYGTNILEGKEKIH-----NDFNKKNYIYHIQEN 825


>UniRef50_Q5UR84 Cluster: Putative F-box protein R637; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Putative F-box
           protein R637 - Mimivirus
          Length = 156

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +2

Query: 500 KVTSITHTEGREISCGKKWFNNNNPELDCRVSLTKTHHTGRSDTVVIDQ 646
           K++++  T  R ISC K  F NN P +  +V L  T+ TG + T  +D+
Sbjct: 68  KISTVQDTNNRPISCFKIDFPNNKPTIIQKVVL-PTNQTGNTFTFRLDE 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,158,979
Number of Sequences: 1657284
Number of extensions: 13841478
Number of successful extensions: 31427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31426
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)