Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11o03f
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S912 Cluster: Predicted protein; n=2; Sordariomycetes...    36   0.76 
UniRef50_Q5UR84 Cluster: Putative F-box protein R637; n=1; Acant...    35   1.8  
UniRef50_A0LRY6 Cluster: Glycosyl transferase, family 2; n=1; Ac...    33   7.1  
UniRef50_A0CJH2 Cluster: Chromosome undetermined scaffold_2, who...    32   9.3  

>UniRef50_Q7S912 Cluster: Predicted protein; n=2;
           Sordariomycetes|Rep: Predicted protein - Neurospora
           crassa
          Length = 449

 Score = 35.9 bits (79), Expect = 0.76
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 154 NNLITRQRRNQTSMNEATRPMQSIPPIHPSNIVFVLPKKY 35
           + L  +Q++ Q   + AT P Q++PP+ PSN V   P  Y
Sbjct: 29  HQLQQQQQQQQQQQSTATAPPQTLPPLQPSNTVMQQPPSY 68


>UniRef50_Q5UR84 Cluster: Putative F-box protein R637; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Putative F-box
           protein R637 - Mimivirus
          Length = 156

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = -3

Query: 590 KVTSITHTEGREISCGKKWFNNNNPELDCRVSLTKTHHTGRSDTVVIDQRRMDEI 426
           K++++  T  R ISC K  F NN P +  +V L  T+ TG + T  +D+   +++
Sbjct: 68  KISTVQDTNNRPISCFKIDFPNNKPTIIQKVVL-PTNQTGNTFTFRLDENAFEKL 121


>UniRef50_A0LRY6 Cluster: Glycosyl transferase, family 2; n=1;
            Acidothermus cellulolyticus 11B|Rep: Glycosyl
            transferase, family 2 - Acidothermus cellulolyticus
            (strain ATCC 43068 / 11B)
          Length = 1297

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -1

Query: 526  IITRSLIVEYL*QRHTIPGAVIQWSLTSEEWMRFHLCLTYESLKITILVYFN 371
            I T   + +YL +RH +    + W+  +EE+MR  L   + +L  + +V+F+
Sbjct: 960  INTAFRMADYLARRHGVQNRFVVWAKPAEEFMRSALAAAFPTLADSEIVFFD 1011


>UniRef50_A0CJH2 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 418

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -2

Query: 387 FWYISMVNLVAYESAHVF-TSFYLFIQFCF 301
           +WYI++++LV+  +  VF TSFY +I F F
Sbjct: 98  YWYITIISLVSRVAYSVFITSFYSYIPFLF 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,773,944
Number of Sequences: 1657284
Number of extensions: 12136718
Number of successful extensions: 28712
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28709
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)