Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o02r
(751 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondr... 355 7e-97
UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA... 345 7e-94
UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondr... 342 5e-93
UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma j... 198 1e-49
UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;... 193 4e-48
UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella ve... 179 8e-44
UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal pr... 169 8e-41
UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and ma... 155 1e-36
UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondr... 151 1e-35
UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, wh... 135 1e-30
UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast... 132 7e-30
UniRef50_P31334 Cluster: 54S ribosomal protein L9, mitochondrial... 128 1e-28
UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial... 126 6e-28
UniRef50_A5CCL2 Cluster: 50S ribosomal protein L3; n=1; Orientia... 125 1e-27
UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_Q00RY2 Cluster: Putative ribosomal protein L3; n=1; Ost... 122 1e-26
UniRef50_Q9P6P6 Cluster: Mitochondrial ribosomal protein subunit... 121 2e-26
UniRef50_Q6C279 Cluster: Yarrowia lipolytica chromosome F of str... 118 2e-25
UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein... 114 2e-24
UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53; Bacteri... 113 6e-24
UniRef50_P60454 Cluster: 50S ribosomal protein L3; n=14; Bacteri... 112 8e-24
UniRef50_Q28UW2 Cluster: 50S ribosomal protein L3; n=93; Proteob... 112 1e-23
UniRef50_Q1AU29 Cluster: 50S ribosomal protein L3; n=1; Rubrobac... 110 3e-23
UniRef50_Q873B3 Cluster: Related to ribosomal protein L3, mitoch... 107 3e-22
UniRef50_Q9SKX4 Cluster: 50S ribosomal protein L3-1, chloroplast... 107 3e-22
UniRef50_Q9L0E0 Cluster: 50S ribosomal protein L3; n=35; Bacteri... 106 5e-22
UniRef50_Q6UCS0 Cluster: 50S ribosomal protein L3; n=1; uncultur... 105 2e-21
UniRef50_Q5AAK4 Cluster: Likely mitochondrial ribosomal protein;... 103 4e-21
UniRef50_A4RTL3 Cluster: Plastid ribosomal protein L3, imported ... 103 6e-21
UniRef50_Q08TH3 Cluster: 50S ribosomal protein L3; n=2; Cystobac... 102 8e-21
UniRef50_Q67JU3 Cluster: 50S ribosomal protein L3; n=55; Firmicu... 102 8e-21
UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3; Anaplasm... 101 3e-20
UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7; Bacteria... 100 4e-20
UniRef50_Q3A9R6 Cluster: 50S ribosomal protein L3; n=3; Bacteria... 99 1e-19
UniRef50_A3EVS1 Cluster: 50S ribosomal protein L3; n=1; Leptospi... 98 2e-19
UniRef50_Q9HWD5 Cluster: 50S ribosomal protein L3; n=19; Proteob... 98 2e-19
UniRef50_Q580R4 Cluster: Ribosomal protein L3 mitochondrial, put... 96 7e-19
UniRef50_Q6MJ15 Cluster: 50S ribosomal protein L3; n=1; Bdellovi... 96 9e-19
UniRef50_A6PR85 Cluster: 50S ribosomal protein L3; n=2; Chlamydi... 95 1e-18
UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112; Bacter... 95 2e-18
UniRef50_Q97EH8 Cluster: 50S ribosomal protein L3; n=12; Bacteri... 95 2e-18
UniRef50_O66431 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 95 2e-18
UniRef50_P60447 Cluster: 50S ribosomal protein L3; n=85; Gammapr... 92 1e-17
UniRef50_Q3ZZM4 Cluster: 50S ribosomal protein L3; n=10; cellula... 92 1e-17
UniRef50_A7APA8 Cluster: 50S ribosomal protein L3, putative; n=3... 92 2e-17
UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32; Bacteri... 92 2e-17
UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 92 2e-17
UniRef50_P94267 Cluster: 50S ribosomal protein L3; n=4; Borrelia... 91 2e-17
UniRef50_Q5GSU4 Cluster: 50S ribosomal protein L3; n=6; Ricketts... 91 3e-17
UniRef50_Q7XYP4 Cluster: 50S ribosomal protein L3, chloroplast p... 91 3e-17
UniRef50_Q7V9W2 Cluster: 50S ribosomal protein L3; n=35; cellula... 90 6e-17
UniRef50_Q6Q8Y8 Cluster: 50S ribosomal protein L3; n=1; uncultur... 89 1e-16
UniRef50_Q85FW3 Cluster: Chloroplast 50S ribosomal protein L3; n... 89 1e-16
UniRef50_Q8EUB3 Cluster: 50S ribosomal protein L3; n=6; Firmicut... 88 2e-16
UniRef50_Q7VQE8 Cluster: 50S ribosomal protein L3; n=38; Bacteri... 88 2e-16
UniRef50_Q1NYY1 Cluster: 50S ribosomal protein L3; n=4; Bacteria... 87 3e-16
UniRef50_A6CGN0 Cluster: 50S ribosomal protein L3; n=2; Bacteria... 87 4e-16
UniRef50_Q9Z7Q7 Cluster: 50S ribosomal protein L3; n=9; Chlamydi... 85 1e-15
UniRef50_P75580 Cluster: 50S ribosomal protein L3; n=4; Mycoplas... 85 2e-15
UniRef50_A6G3Z5 Cluster: 50S ribosomal protein L3; n=1; Plesiocy... 83 9e-15
UniRef50_O83219 Cluster: 50S ribosomal protein L3; n=2; Treponem... 81 2e-14
UniRef50_Q7UN20 Cluster: 50S ribosomal protein L3; n=2; Planctom... 81 2e-14
UniRef50_Q81VT0 Cluster: 50S ribosomal protein L3; n=9; Bacteria... 81 3e-14
UniRef50_A6GV22 Cluster: 50S ribosomal protein L3; n=2; cellular... 80 5e-14
UniRef50_A5K6P7 Cluster: 50S ribosomal protein L3, putative; n=5... 79 9e-14
UniRef50_Q8KTP2 Cluster: 50S ribosomal protein L3; n=1; Candidat... 78 2e-13
UniRef50_Q4UBR8 Cluster: 50S ribosomal protein L3, putative; n=2... 78 3e-13
UniRef50_Q8Y440 Cluster: 50S ribosomal protein L3; n=19; Bacteri... 78 3e-13
UniRef50_Q5FM90 Cluster: 50S ribosomal protein L3; n=31; Bacteri... 77 6e-13
UniRef50_Q2IJD0 Cluster: 50S ribosomal protein L3; n=2; Anaeromy... 75 1e-12
UniRef50_Q1ISC2 Cluster: 50S ribosomal protein L3; n=5; Bacteria... 72 1e-11
UniRef50_Q9TLT2 Cluster: Chloroplast 50S ribosomal protein L3; n... 72 2e-11
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 71 2e-11
UniRef50_A7AWX6 Cluster: Ribosomal protein L3 domain containing ... 70 5e-11
UniRef50_Q7M8D4 Cluster: 50S ribosomal protein L3; n=23; Epsilon... 70 7e-11
UniRef50_Q8I4X7 Cluster: 50S ribosomal protein L3, putative; n=7... 61 2e-08
UniRef50_A5KRQ1 Cluster: 50S ribosomal protein L3; n=1; candidat... 61 3e-08
UniRef50_A6QCP8 Cluster: 50S ribosomal protein L3; n=2; Epsilonp... 59 1e-07
UniRef50_Q9AIN8 Cluster: 50S ribosomal protein L3; n=4; Candidat... 57 5e-07
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 56 9e-07
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 54 4e-06
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 52 2e-05
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 52 2e-05
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 50 5e-05
UniRef50_P53307 Cluster: Uncharacterized protein YGR219W; n=1; S... 49 1e-04
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 44 0.004
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 44 0.005
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 43 0.009
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 42 0.016
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 42 0.021
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 41 0.028
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 40 0.065
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 40 0.086
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 38 0.20
UniRef50_A3XPQ6 Cluster: Putative outer membrane protein, probab... 36 1.4
UniRef50_Q5AG30 Cluster: Putative uncharacterized protein; n=3; ... 36 1.4
UniRef50_A5DTI2 Cluster: Predicted protein; n=1; Lodderomyces el... 36 1.4
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 36 1.4
UniRef50_Q4DGU3 Cluster: Helicase-like protein, putative; n=1; T... 35 2.5
UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio reri... 34 3.3
UniRef50_A4A686 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 34 4.3
UniRef50_A1XVT1 Cluster: Fibrillar collagen precursor; n=1; Hydr... 34 4.3
UniRef50_UPI0000E46F0A Cluster: PREDICTED: similar to G/T mismat... 33 5.7
UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 33 5.7
UniRef50_Q1DYA1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q4RQM9 Cluster: Chromosome 2 SCAF15004, whole genome sh... 33 9.9
UniRef50_Q2LSF4 Cluster: Seceted metal-dependent hydrolase of th... 33 9.9
UniRef50_A2Z8E1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_Q4DY12 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_Q28XA1 Cluster: GA12387-PA; n=1; Drosophila pseudoobscu... 33 9.9
UniRef50_A7T2G6 Cluster: Predicted protein; n=2; Nematostella ve... 33 9.9
>UniRef50_UPI0000DB6B51 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3 CG8288-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to mitochondrial ribosomal protein L3
CG8288-PA - Apis mellifera
Length = 352
Score = 355 bits (873), Expect = 7e-97
Identities = 158/250 (63%), Positives = 199/250 (79%), Gaps = 1/250 (0%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
+KIG YP+W K+G+KV TTL+Q+VDN V+KYIPPEEYKP+ ++ + K GC+++GA
Sbjct: 95 KKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPV--KPIRHRIEVKNGCLVLGA 152
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
N+DP ++TK+Y GIF+ G+ PK+ L RF +SP + L GTPLYATHF+ G+ IDIR K
Sbjct: 153 INVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQPGTPLYATHFKPGEFIDIRGK 212
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
T+DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG+ ARV PGTKMPGHMGNRWR L
Sbjct: 213 TIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHMGNRWRIL 272
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQ-PFMNDVPK 31
+GVKILRI+TKYNVIW L +PGE MCYL+DT+LP K++ T+P FPT +++P+
Sbjct: 273 KGVKILRINTKYNVIWVLAQNVPGELNTMCYLYDTILPTKKS-TSPYFPTYLSNESELPE 331
Query: 30 EYFEDTIHPF 1
+ D +HPF
Sbjct: 332 NLYADDVHPF 341
>UniRef50_Q9VXQ0 Cluster: CG8288-PA; n=7; Neoptera|Rep: CG8288-PA -
Drosophila melanogaster (Fruit fly)
Length = 362
Score = 345 bits (848), Expect = 7e-94
Identities = 149/231 (64%), Positives = 187/231 (80%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
ARKIG YPLW K+G+++ TTLLQ+VDNHVIKYIPPEEY P V + K+ GCILVG
Sbjct: 104 ARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKR--GCILVG 161
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+E +P+++TK+Y GIF + G+LPK++L RF+VSPE+ L GTPL HFRVGD +D+R
Sbjct: 162 SETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAPGTPLNVNHFRVGDFVDVRG 221
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+D GFQGV+KR GFKGMPASHGVTKTHRR GNIG GGEK RVWPGTKMPGHMGNRWR
Sbjct: 222 KTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGNRWRI 281
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 58
++G+++ RI+TKYNV+W G ++ G TG + Y++DT+LP ++NK APPFPT
Sbjct: 282 IKGLRVWRINTKYNVMWVQGSSVAGPTGGLVYIYDTILPTRKNKEAPPFPT 332
>UniRef50_UPI00015B6099 Cluster: PREDICTED: similar to Mitochondrial
39S ribosomal protein L3; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Mitochondrial 39S ribosomal
protein L3 - Nasonia vitripennis
Length = 375
Score = 342 bits (841), Expect = 5e-93
Identities = 159/256 (62%), Positives = 196/256 (76%), Gaps = 6/256 (2%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
ARKIG P+W KDGKKV TT+ QV DNHVIKYIPPEEYKPMI + + GC+LVG
Sbjct: 110 ARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNT-GCLLVG 168
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A++ DP + TK+YCG+F+ G++PKR L RF VSPE AL GTPL+ATH+++G IDIR
Sbjct: 169 ADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQPGTPLFATHYKIGQYIDIRG 228
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+DRGFQGVMKRWGF GMPASHGVTKTHRRPGNIGSGG+KARV PGTK+PGHMGNR+R
Sbjct: 229 KTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMGNRYRI 288
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNK--TAPP-FPTQPFMND 40
++ +I+RI+T+YNVIW LG A GET ++ +DT++PLK K +PP FPT N+
Sbjct: 289 VKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKALNSPPHFPTYIPTNE 348
Query: 39 ---VPKEYFEDTIHPF 1
+P+E F D +H F
Sbjct: 349 DEVLPEELFVDDLHNF 364
>UniRef50_Q5DGM0 Cluster: SJCHGC01793 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01793 protein - Schistosoma
japonicum (Blood fluke)
Length = 391
Score = 198 bits (483), Expect = 1e-49
Identities = 113/264 (42%), Positives = 154/264 (58%), Gaps = 18/264 (6%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMI------------KSNVKW 607
A K+G YPLW K G+K+ T+ QV DNH ++Y PP E I K W
Sbjct: 99 AIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSKRPPSW 158
Query: 606 VEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYAT 427
+ ++++G LVGA + D + G+ PKR + RF+VSP++AL GTPL
Sbjct: 159 ITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKPGTPLSVH 218
Query: 426 HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGN-IGSGGEKARVWPG 250
HFRVGD +DI ++T++RGFQGV++RWG KG PA+HG TK HRR G+ G GG AR G
Sbjct: 219 HFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCGGPIAR---G 275
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNK--- 79
+MPG MGNR+R+LRGV I+RI+ K +I+ G A PG A C L D+ L ++ +
Sbjct: 276 KRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPG-ATPGPVHAYCLLHDSWLANRQRRLDA 334
Query: 78 TAPPFPT--QPFMNDVPKEYFEDT 13
PP PT +N+ F+ T
Sbjct: 335 NPPPVPTCIPSIVNESNSHQFDST 358
>UniRef50_P09001 Cluster: Mitochondrial 39S ribosomal protein L3;
n=31; Deuterostomia|Rep: Mitochondrial 39S ribosomal
protein L3 - Homo sapiens (Human)
Length = 348
Score = 193 bits (470), Expect = 4e-48
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 1/232 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G PLW KDG+K TLLQV D HV+KY E K + VG
Sbjct: 101 ALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSVG 148
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+ + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D+ +
Sbjct: 149 GKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTA 208
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +RT
Sbjct: 209 KTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRT 267
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAP-PFPT 58
G+K+ RI+TK+N+I+ G ++PG + + D+ LP ++ PFPT
Sbjct: 268 EYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPT 318
>UniRef50_A7SQV4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 264
Score = 179 bits (435), Expect = 8e-44
Identities = 101/247 (40%), Positives = 140/247 (56%), Gaps = 1/247 (0%)
Frame = -2
Query: 744 KIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAE 565
K+G LW KDG+++ TL+Q+ D V++ + + E Q VGA
Sbjct: 15 KLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHG----GRDPQTELQ------VGAV 64
Query: 564 N-IDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
N ++ + + K G F + PKR +C F V+P++ L GTP+ A HF G + I+
Sbjct: 65 NKLELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTPGTPITAAHFYPGQYVKIQGV 124
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
T D+GFQGVMKRWG G PASHG +KTHR+ G G G + RVWPG KM GHMGN+ TL
Sbjct: 125 TKDKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTL 184
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFMNDVPKE 28
V++ RI+TKYNV++ G PG TG + D KR+ APPFPT D P++
Sbjct: 185 HAVRVHRINTKYNVLYVQG-QCPGPTGGFLKISDA---WKRHPHAPPFPTH---MDEPEK 237
Query: 27 YFEDTIH 7
E+ ++
Sbjct: 238 ALEEDLY 244
>UniRef50_P49404 Cluster: Putative mitochondrial 39S ribosomal
protein L3; n=2; Caenorhabditis|Rep: Putative
mitochondrial 39S ribosomal protein L3 - Caenorhabditis
elegans
Length = 403
Score = 169 bits (410), Expect = 8e-41
Identities = 98/243 (40%), Positives = 136/243 (55%), Gaps = 3/243 (1%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE-YKPMIKSNVKWVEKQ-KYGCILV 574
RKIG P W +G ++ T+L+V +NHV+ PE YK K + + V
Sbjct: 108 RKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGPMWRVTV 167
Query: 573 GAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN-GTPLYATHFRVGDCIDI 397
GA N DP+ T Y F G+ K L F+V+ E ALP+ G PL A HF VG +
Sbjct: 168 GAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALPSAGQPLDARHFGVGQYVTA 226
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRW 217
KT+D GFQG M RWG +G P + TK+HRR G++GS G+ AR+WPG +MPGHMG W
Sbjct: 227 TGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMPGHMGYEW 284
Query: 216 RTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFMNDV 37
RT+ G++I+RI+ VI+ G ++PG+ G L D + KR K+ P P + +
Sbjct: 285 RTVSGLEIVRINVDKQVIYVKG-SVPGDIGETILLKDCLQEEKRLKSGPMPTWAPSLETI 343
Query: 36 PKE 28
+E
Sbjct: 344 EEE 346
>UniRef50_Q5KGQ8 Cluster: Ribosomal large subunit assembly and
maintenance-related protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal large subunit
assembly and maintenance-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 308
Score = 155 bits (376), Expect = 1e-36
Identities = 85/216 (39%), Positives = 117/216 (54%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
ARK G LW DG++ T+LQV N V+++ PP P Y + +G
Sbjct: 49 ARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSP-------------YHTLQIG 95
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A TK G F G+ PK L F VS ++ +P GT L A HF G +D++
Sbjct: 96 ASPRREKTTTKQQLGHFKKAGVEPKYRLKEFQVSEDAVVPVGTELSAGHFVPGQFVDVQG 155
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
T+ +GFQGVMKR GF+G+ ASHG + HR PG+IG + RV PG KMPGHMGN RT
Sbjct: 156 VTIGKGFQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRT 215
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDT 103
+ + I R+D N+++ G +PG + Y+ D+
Sbjct: 216 TQNLLIHRVDHVLNLLYVRG-CVPGSDDSFLYVKDS 250
>UniRef50_UPI0000E48888 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L3; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L3 - Strongylocentrotus purpuratus
Length = 343
Score = 151 bits (367), Expect = 1e-35
Identities = 94/251 (37%), Positives = 136/251 (54%), Gaps = 1/251 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G PLW K+GK+V TTLLQV++ +VI + P + ++ G +LV
Sbjct: 119 AIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHP---------QGLNGSDRP--GTVLVA 167
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A+N P ++Y +F SV + K H+ F V+ +AL GTPLYA HFR G +DI +
Sbjct: 168 AKNAPPYYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQPGTPLYAAHFRPGMYVDIAA 227
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+D+GFQGVMKRWG KG PASHG TKTHR+ G G GG
Sbjct: 228 KTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGG--------------------- 266
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVL-PLKRNKTAPPFPTQPFMNDVP 34
+LR++TK+N+++ G I G + D+ L P+ PPFPT ++
Sbjct: 267 -----VLRVNTKHNILYVKG-TIHGRNLGFVKVKDSHLHPVSE---MPPFPTYYPEEEIE 317
Query: 33 KEYFEDTIHPF 1
++ ++++H F
Sbjct: 318 EDLMDESLHNF 328
>UniRef50_A0D1W5 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 409
Score = 135 bits (327), Expect = 1e-30
Identities = 83/247 (33%), Positives = 129/247 (52%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G W K G + + T+LQ+ +N V++ V+ Y + +G
Sbjct: 155 AVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV----------------VKNDTYTGLQIG 198
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A ++ + K G F + PK+++ F ++PE+ LP G L A HF G IDI+
Sbjct: 199 AGRVNIKTLKKPQIGHFLKANIPPKKYIKEFPITPENTLPVGFMLTARHFTPGQYIDIQG 258
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
+ +GF G +KR FK PA+HG + HR+ G+ G + RV+ G KMPGH+GN T
Sbjct: 259 ISTGKGFGGTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVT 318
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFMNDVPK 31
G++I RID +I+ G ++PG+ G++ YL D+ K+NK FPT N K
Sbjct: 319 CEGIQIYRIDAVRQLIYIKG-SVPGKPGSIVYLRDSWKAQKKNKELLNFPTLAVENG--K 375
Query: 30 EYFEDTI 10
EY ++ +
Sbjct: 376 EYAKEIV 382
>UniRef50_Q9LRN8 Cluster: 50S ribosomal protein L3-2, chloroplast
precursor; n=6; Magnoliophyta|Rep: 50S ribosomal protein
L3-2, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 324
Score = 132 bits (320), Expect = 7e-30
Identities = 84/231 (36%), Positives = 117/231 (50%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K G LW K GK++ ++L V DN I S VK VEK+ + +G
Sbjct: 81 AVKCGMTALWDKWGKRIPISILWVDDN--------------IVSQVKTVEKEGIFALQIG 126
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
P ++K G F + G+ KR L F V+ ++ LP GT L HF G +D+
Sbjct: 127 CGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRHFVPGQYVDVTG 186
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
T +GFQG MKR GF GMPASHG + +HR G+ G +V+ G KM G MG RT
Sbjct: 187 ITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRT 246
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 58
++ V + +ID N++W G +PG G ++ D K + + PFPT
Sbjct: 247 VKNVWVYKIDPARNLMWVRG-QVPGAEGNFVFIKDAWCK-KPDISKLPFPT 295
>UniRef50_P31334 Cluster: 54S ribosomal protein L9, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 54S ribosomal
protein L9, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 269
Score = 128 bits (310), Expect = 1e-28
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = -2
Query: 603 EKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL-PNGTPLYAT 427
E Y VG + S V++ G F S + PK H+ F V E L P GT L +
Sbjct: 99 EVNGYFACQVGYGSRHLSKVSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPS 158
Query: 426 HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGT 247
F+ G +D+RS + +GF GVMKR+GFKG+ ASHG + HR G+ G + RV PG
Sbjct: 159 FFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGR 218
Query: 246 KMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
KMPGHMGN T++ VK+L++D + NVIW G ++ G + + D +
Sbjct: 219 KMPGHMGNEHVTIQNVKVLKVDDENNVIWVKG-SVAGPKNSFVKIQDAI 266
>UniRef50_Q0CHL1 Cluster: 60S ribosomal protein L9, mitochondrial;
n=11; Eukaryota|Rep: 60S ribosomal protein L9,
mitochondrial - Aspergillus terreus (strain NIH 2624)
Length = 335
Score = 126 bits (304), Expect = 6e-28
Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Frame = -2
Query: 591 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL-PNGTPLYATHFRV 415
Y + VGA PS VTK G F + G+ PKRH+ F V E+ L P G + A+ FR
Sbjct: 159 YYAVQVGAGWKHPSNVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFRE 218
Query: 414 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIG-SGGEKARVWPGTKMP 238
G +D RS T +GF GVMKR GF G SHGV+ THR G+ G S G +RV+PG KM
Sbjct: 219 GQFVDARSTTKGKGFAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMA 278
Query: 237 GHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
G+MGN T++ +K+L++D + ++ G A+ G G + + D +
Sbjct: 279 GNMGNEQNTVQNLKVLKVDPENGIVVVQG-AVSGPKGCVVRIQDAI 323
>UniRef50_A5CCL2 Cluster: 50S ribosomal protein L3; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L3 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 229
Score = 125 bits (302), Expect = 1e-27
Identities = 73/220 (33%), Positives = 121/220 (55%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G + + G+KV+ TLL+V V+ + K V K Y +++G
Sbjct: 23 AEKLGMSSKFDESGRKVAITLLKVDVCQVLWH--------------KLVSKDGYNAVILG 68
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+NI P V K IF + PK + F V+ + L + L A++FRVG +D+R
Sbjct: 69 YKNISPFKVKKPMHSIFSRAKIEPKAIIKEFKVAEDKMLEIASILDASYFRVGQYVDVRG 128
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
T+ +GF G MKR GF+G+ ASHGV+ +HR G+ G+ R + KM GHMG R+ T
Sbjct: 129 VTIGKGFAGAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFAT 188
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPL 91
++ +++ +D + ++ G +IPG++G++ Y+ D++ L
Sbjct: 189 IQNLRVDSVDLEKRLLVIQG-SIPGKSGSIVYITDSIKKL 227
>UniRef50_Q54I61 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 351
Score = 124 bits (300), Expect = 2e-27
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Frame = -2
Query: 582 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA-LPNGTPLYATHFRVGDC 406
I VGA+ I V+K G F + PKR L F V+ + L GTP+ HF G
Sbjct: 112 IQVGADEIKLKNVSKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQL 171
Query: 405 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
I ++ +GF G MKRW F G PA+HGV+ THR G+ G RV+ G KMPG +G
Sbjct: 172 ITVKGTNTGKGFAGGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLG 231
Query: 225 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQ-PF 49
+ T++ +++L+I+T+ N + G A+PG+ G YL T + K APPFPT P
Sbjct: 232 GKSCTVKNLQVLKINTEMNCLLVKG-AVPGKKGG--YLKITDSRSMKWKEAPPFPTYFPT 288
Query: 48 MNDVPKE 28
++D+ K+
Sbjct: 289 LDDMIKD 295
>UniRef50_Q00RY2 Cluster: Putative ribosomal protein L3; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L3 -
Ostreococcus tauri
Length = 312
Score = 122 bits (293), Expect = 1e-26
Identities = 69/178 (38%), Positives = 91/178 (51%)
Frame = -2
Query: 591 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVG 412
Y + +G VTK G F G KR L F VS L GT + A HF G
Sbjct: 106 YDAVQIGYGARKAKGVTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTPGTVITAAHFAAG 165
Query: 411 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGH 232
+D+ T +GFQG MKRWGF G PA+HG TK HR G+IG + RV+ G KM G
Sbjct: 166 QYVDVGGTTKGKGFQGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGR 225
Query: 231 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 58
MG R RT++ + ++DT+ N+++ G IPG G + D + + PFPT
Sbjct: 226 MGGRRRTVQSAYVWKVDTERNLLYIKG-QIPGGAGTAVTIRDALRKPPKLGEQVPFPT 282
>UniRef50_Q9P6P6 Cluster: Mitochondrial ribosomal protein subunit
L9; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L9 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 121 bits (291), Expect = 2e-26
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = -2
Query: 618 NVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTP 439
+V+ EK Y + VG+ P +TK G F S + PK H+ F V S L +
Sbjct: 79 DVRTKEKHGYYAVQVGSGIRKPKSITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGT 138
Query: 438 LYAT-HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKAR 262
++ T +F+ +D++ T +GF GVMKRWGF G ASHG + +HR PG+ G +R
Sbjct: 139 IFTTDYFKPKQYVDVKGITKGKGFAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSR 198
Query: 261 VWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
V PG KM GHMG+R RT++ + + +D I G +IPG + Y+ DT+
Sbjct: 199 VLPGRKMAGHMGHRSRTVKNLLVWAVDADLECILVKG-SIPGPNKSAVYVTDTI 251
>UniRef50_Q6C279 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 277
Score = 118 bits (284), Expect = 2e-25
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Frame = -2
Query: 612 KWVEKQKYGCILVGAENIDPSV--VTKDYCGIFDSVGMLPKRHLCRFVV-SPESALPNGT 442
K EK Y + VG + + ++ + K G F + + PK+ + F + + LP T
Sbjct: 85 KTEEKHGYNAVQVGMGHRNKALQKMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITT 144
Query: 441 PLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKAR 262
+ A+HF+VG +D+++ + +GF GVMKR GF G+PASHGV+ HR G G + R
Sbjct: 145 EITASHFKVGQYVDVQATSKGKGFSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGR 204
Query: 261 VWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFD 106
V+PG KM G+MGN TL+ K+L +D ++ G+ +PG G + L D
Sbjct: 205 VFPGRKMAGNMGNETVTLKNQKVLSVDEDTGIVIVKGM-VPGSKGKIVKLSD 255
>UniRef50_Q22HG3 Cluster: Ribosomal protein L3 containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Ribosomal
protein L3 containing protein - Tetrahymena thermophila
SB210
Length = 488
Score = 114 bits (275), Expect = 2e-24
Identities = 71/229 (31%), Positives = 113/229 (49%)
Frame = -2
Query: 744 KIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAE 565
K+G +W K GK + T++Q+ V++ VK EK + +G
Sbjct: 241 KLGMTSIWDKWGKLHALTVIQIDRCQVVQ--------------VKTEEKDGVNALQLGVG 286
Query: 564 NIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKT 385
+ K G + PKRHL F VSP+ LP G L A HF G +DI+ +
Sbjct: 287 EKSLKRINKPTIGHLMKNDIPPKRHLKEFKVSPDCFLPAGYMLSARHFVPGQYVDIQGIS 346
Query: 384 MDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLR 205
+ +GF G +KRW FK A+HG + +HR PG+ G + RV+ KM GHMG T+
Sbjct: 347 VGKGFAGTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIM 406
Query: 204 GVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPT 58
+++ +ID + ++++ G +PG+ G++ + D +N+ FPT
Sbjct: 407 DLQVYKIDVERSLVYIRG-HVPGKPGSLVQIRDAFKKQVQNEQFLNFPT 454
>UniRef50_Q2JFH6 Cluster: 50S ribosomal protein L3; n=53;
Bacteria|Rep: 50S ribosomal protein L3 - Frankia sp.
(strain CcI3)
Length = 235
Score = 113 bits (271), Expect = 6e-24
Identities = 62/197 (31%), Positives = 96/197 (48%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G K+ T + +N V+ + + P + + VK + Y + +G +DP + K
Sbjct: 11 GTKLGMTQVWDANNRVVP-VTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINKPA 69
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F + G+ P+RHL + G L F G +D+ + +GF GVMKR
Sbjct: 70 RGHFATSGVTPRRHLVELRTADAGNYRPGQELTGEVFSAGTVVDVTGTSKGKGFAGVMKR 129
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
GFKG+ A HGV + HR PG++G RV+ G +M G MG+ T G+ I +DT+
Sbjct: 130 HGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVDTER 189
Query: 171 NVIWTLGVAIPGETGAM 121
+ G A+PG G +
Sbjct: 190 GYLLVRG-AVPGPDGGL 205
>UniRef50_P60454 Cluster: 50S ribosomal protein L3; n=14;
Bacteria|Rep: 50S ribosomal protein L3 - Geobacter
sulfurreducens
Length = 210
Score = 112 bits (270), Expect = 8e-24
Identities = 70/219 (31%), Positives = 110/219 (50%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A+K+G ++ +DGK++ T++Q P + K Y I VG
Sbjct: 7 AKKLGMTQIFAEDGKRIPVTVVQA--------------GPCVVLQKKTSATDGYDAIQVG 52
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+ + VTK G + G H+ F + G + A F VG+ ID+
Sbjct: 53 FLSQEARKVTKPMLGHIKAAGQGAFAHIREFRLDDVDRYNVGDVISADAFEVGEYIDVTG 112
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
++ +GFQGV+KRWGF+G +SHG + HR PG+IGS +RV+ KMPG +GN T
Sbjct: 113 TSIGKGFQGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVT 171
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP 94
++ ++++R+D N++ G AIPG + + DTV P
Sbjct: 172 VQRLQVVRVDAADNILLIKG-AIPGAKNGIVLVKDTVKP 209
>UniRef50_Q28UW2 Cluster: 50S ribosomal protein L3; n=93;
Proteobacteria|Rep: 50S ribosomal protein L3 -
Jannaschia sp. (strain CCS1)
Length = 290
Score = 112 bits (269), Expect = 1e-23
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A+K+G L+ +DGK++ T+LQ+ V+ K + Y + +G
Sbjct: 8 AKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAK--------------KTSDSDGYSAVQLG 53
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A + G+F + PKR L F V ++ + G + A H+ G +D+
Sbjct: 54 AGTAKAKRTSAPMRGVFAKASVEPKRKLVEFRVDADNLIEVGEEIIADHYFEGQFVDVTG 113
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
++ +GFQG MKR F G+ ASHGV+ +HR G+ G + RV+ G KM GHMG T
Sbjct: 114 TSIGKGFQGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVT 173
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRNKTAP 70
+ ++I+R DT +I G A+PG G + D V P N P
Sbjct: 174 TQNLQIVRTDTDRGLIMIKG-AVPGSKGGWVTVKDAVKKPFPENAILP 220
>UniRef50_Q1AU29 Cluster: 50S ribosomal protein L3; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: 50S ribosomal protein L3 -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 205
Score = 110 bits (265), Expect = 3e-23
Identities = 59/175 (33%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
Frame = -2
Query: 642 EYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFV-VSP 466
E +P + + VK EK Y + VG + V + + G+F + + P+R+L VS
Sbjct: 29 EVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGRVNRPHAGVFAKLDIPPRRYLRELRGVSG 88
Query: 465 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 286
E G + A F GD + + +++ RGFQG +KR GF P +HG + R+PG++
Sbjct: 89 EV----GQTIGADAFEAGDRVHVSARSKGRGFQGTVKRHGFGRGPVTHG-SHNIRQPGSV 143
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 121
G+ + +R++ G +MPGHMG+R T+R ++++R+D + N IW G +PG A+
Sbjct: 144 GASADPSRIFKGQRMPGHMGDRSVTVRNLEVVRVDAERNEIWVRG-GVPGGRNAI 197
>UniRef50_Q873B3 Cluster: Related to ribosomal protein L3,
mitochondrial; n=6; Pezizomycotina|Rep: Related to
ribosomal protein L3, mitochondrial - Neurospora crassa
Length = 384
Score = 107 bits (257), Expect = 3e-22
Identities = 66/180 (36%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Frame = -2
Query: 600 KQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVV-SPESALPNGTPLYATH 424
K Y + VG V G +++ G+ PK+ L F V + + LP G L+
Sbjct: 148 KNGYWAVQVGLGERRAENVGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDW 207
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI-GSGGEKARVWPGT 247
F VG +D+R T GF G MKR GF G ASHG + HR G++ GS G +RV PG
Sbjct: 208 FHVGQVVDVRGITRGMGFAGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGK 267
Query: 246 KMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPP 67
KMPG MG + T++ + IL +D + ++ G A+ G GA+ + D V K APP
Sbjct: 268 KMPGRMGAQQHTVQNLPILMVDNELGIVVVKG-AVAGHKGAVVKVQDAV------KKAPP 320
>UniRef50_Q9SKX4 Cluster: 50S ribosomal protein L3-1, chloroplast
precursor; n=15; cellular organisms|Rep: 50S ribosomal
protein L3-1, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 271
Score = 107 bits (257), Expect = 3e-22
Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Frame = -2
Query: 627 IKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRF-VVSPESALP 451
I + +K + Y + +G + +TK G G +P RHL F + + E P
Sbjct: 88 IVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEP 147
Query: 450 NGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
N ++ F+ GD +D+ T+ +GFQG +KR FK +HG +K+HR G+IG+G
Sbjct: 148 NQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHG-SKSHRALGSIGAGTT 206
Query: 270 KARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
RV+ G KMPG MG +R +KI+++D + NV+ G A+PG+ G
Sbjct: 207 PGRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKG-ALPGKPG 253
>UniRef50_Q9L0E0 Cluster: 50S ribosomal protein L3; n=35;
Bacteria|Rep: 50S ribosomal protein L3 - Streptomyces
coelicolor
Length = 214
Score = 106 bits (255), Expect = 5e-22
Identities = 61/197 (30%), Positives = 96/197 (48%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + +N V+ + + P + + V+ + Y + + IDP V K
Sbjct: 10 GEKLGMTQVWDENNRVVP-VTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPL 68
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F + P+RHL + S G + A F G +D+ +K+ +GF GVMKR
Sbjct: 69 KGHFAKADVTPRRHLVEIRTAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAGVMKR 128
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
FKG ASHG + HR PG+IG RV+ G +M G MGN T + + + +D +
Sbjct: 129 HNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVDAEK 188
Query: 171 NVIWTLGVAIPGETGAM 121
++ G A+PG G +
Sbjct: 189 GLLLIKG-AVPGPNGGL 204
>UniRef50_Q6UCS0 Cluster: 50S ribosomal protein L3; n=1; uncultured
marine alpha proteobacterium HOT2C01|Rep: 50S ribosomal
protein L3 - uncultured marine alpha proteobacterium
HOT2C01
Length = 229
Score = 105 bits (251), Expect = 2e-21
Identities = 66/217 (30%), Positives = 109/217 (50%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A+KIG L+ + G + T+L V + +I + E + +LVG
Sbjct: 7 AKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSEN--------------ENSDKVLVG 52
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
A + + K G FD ++L F +S + + +G L A+HF+ G ID+
Sbjct: 53 ACKLKKT--KKSQKGFFDKKKTDAYKYLREFEISKDQEIKSGDELKASHFKEGQFIDVSG 110
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
T +GF GVMKR F G+ ASHGV+ +HR G+ G + +V+ G KM G G+ +T
Sbjct: 111 YTKGKGFAGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKT 170
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
L+ ++++++D + N+I G A PG G + D++
Sbjct: 171 LQSLQVVKVDEQKNLICVKG-ATPGSRGTWLVVEDSI 206
>UniRef50_Q5AAK4 Cluster: Likely mitochondrial ribosomal protein;
n=4; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 293
Score = 103 bits (248), Expect = 4e-21
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 6/170 (3%)
Frame = -2
Query: 591 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSP-----ESAL-PNGTPLYA 430
Y +++G + +V + + IF++ + PK+ + F + ES L P GT L A
Sbjct: 110 YTAVIMGTIDKLKNVKSTNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTA 169
Query: 429 THFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPG 250
+F VG +D++ T +GF GVMKRWGF G A+HG +K HR PG G RV+PG
Sbjct: 170 DYFSVGQKVDVKGVTKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPG 229
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
KMPG MG++ T +++L D + ++ G +PG ++ + D +
Sbjct: 230 KKMPGRMGHQNNTGFNLEVLHTDGEAGILIVKG-NVPGPKKSIIKVSDAI 278
>UniRef50_A4RTL3 Cluster: Plastid ribosomal protein L3, imported to
chloroplast, large ribosomal subunit; n=2;
Ostreococcus|Rep: Plastid ribosomal protein L3, imported
to chloroplast, large ribosomal subunit - Ostreococcus
lucimarinus CCE9901
Length = 241
Score = 103 bits (246), Expect = 6e-21
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Frame = -2
Query: 744 KIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAE 565
K G ++ DG V T++ V D +V+ + VK Y + VG +
Sbjct: 31 KAGMTQVFTDDGLCVPVTVIAVRDGNVV-------------TQVKTEATDGYNAVQVGYD 77
Query: 564 NIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH-FRVGDCIDIRSK 388
+ +TK G G RHL F + G + T F+ GD +D+R +
Sbjct: 78 AVRDDKLTKPELGHCKKAGAPALRHLEEFRLRDAPTYEVGAQIKPTELFKEGDKVDVRGR 137
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
T+ +GFQG +KR+GF +HG +K+HR+ G+IGSG R++PG +M GHMGN T
Sbjct: 138 TIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTT 196
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMC 118
+G+ ++ ++ + I G +PG+ GA+C
Sbjct: 197 KGLTVVSVED--DCIIVKG-NVPGKKGALC 223
>UniRef50_Q08TH3 Cluster: 50S ribosomal protein L3; n=2;
Cystobacterineae|Rep: 50S ribosomal protein L3 -
Stigmatella aurantiaca DW4/3-1
Length = 259
Score = 102 bits (245), Expect = 8e-21
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Frame = -2
Query: 603 EKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN--GTPLYA 430
EK +Y + +G I V+ + G F +RHL F V+PE A G + A
Sbjct: 77 EKDQYSAVTLGFGEIREKVLNQAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKA 136
Query: 429 THFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPA-SHGVTKTHRRPGNIGSGGEKARVWP 253
F G +D+ T RGF GVM+RW FKG +HG + R PG IG R +P
Sbjct: 137 DLFTKGQLVDVTGTTKGRGFSGVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYP 196
Query: 252 GTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
KMPGH G T + + ++ +DT+ ++ G A+PG A+ Y+ +V
Sbjct: 197 NKKMPGHYGVEQVTTQNLTVVDVDTEKGLLLIKG-AVPGHNDAIVYVRPSV 246
>UniRef50_Q67JU3 Cluster: 50S ribosomal protein L3; n=55;
Firmicutes|Rep: 50S ribosomal protein L3 -
Symbiobacterium thermophilum
Length = 216
Score = 102 bits (245), Expect = 8e-21
Identities = 63/204 (30%), Positives = 104/204 (50%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
GKK+ T + D +I + E P + K Y + +G I ++V K
Sbjct: 7 GKKLGMTQIFAPDGKIIP-VTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETLVNKPL 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F+ + R+L F + +L G + A F G+ +D+ + +GF G +KR
Sbjct: 66 KGHFEKHQVKATRYLREFRLDDVESLNVGDVIKADIFAEGELVDVTGISRGKGFAGGVKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
W F P+SHG +K HRRPG++G ARV G K+PG +G T+ G++++++D +
Sbjct: 126 WNFNRGPSSHG-SKYHRRPGSLGQ-RRWARVPKGRKLPGRLGGERVTVLGLRVVKVDPEK 183
Query: 171 NVIWTLGVAIPGETGAMCYLFDTV 100
N+I G A+PG G++ + D+V
Sbjct: 184 NLILIKG-AVPGAKGSLITIRDSV 206
>UniRef50_Q3YRK9 Cluster: 50S ribosomal protein L3; n=3;
Anaplasmataceae|Rep: 50S ribosomal protein L3 -
Ehrlichia canis (strain Jake)
Length = 231
Score = 101 bits (241), Expect = 3e-20
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Frame = -2
Query: 744 KIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAE 565
K+G+ ++ +GK++ TLL + D+ +I + K + Y +++G E
Sbjct: 11 KVGHTAIFDNEGKRIPVTLLHLRDSFII--------------STKTKDINGYNAVVLGVE 56
Query: 564 NIDPSV-VTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
+ SV + K I + + K + V + G + THF ID+
Sbjct: 57 S---SVNIKKPQLKILEKSNITAKCRIFESRVDNLDGIVKGAKISITHFVENQYIDVTGY 113
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
++ +GF GVMKR FKG+ ASHGV+ HR G+ G + RV+ G KM GH+G+ T+
Sbjct: 114 SLGKGFAGVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTV 173
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV 100
+ +K++ +D + +++ G IPG G+ ++ D V
Sbjct: 174 QNLKVILVDQERSLLVVKGNNIPGAKGSYVFVKDAV 209
>UniRef50_Q8XHS3 Cluster: 50S ribosomal protein L3; n=7;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
perfringens
Length = 209
Score = 100 bits (239), Expect = 4e-20
Identities = 61/192 (31%), Positives = 95/192 (49%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
GKKV T + + VI + E P + K VE Y I VG + +V K
Sbjct: 7 GKKVGMTQIFDENGRVIP-VTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKLVNKPR 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F G+ +R L F + + G + F +GD +D+ + +GFQG +KR
Sbjct: 66 KGHFAKAGVSLRRTLKEFRMEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGFQGTIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
W P SHG +K HR PG++G+ + +R + +MPGHMG + T+ +++++I +
Sbjct: 126 WNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVVKIMPEK 184
Query: 171 NVIWTLGVAIPG 136
N+I G IPG
Sbjct: 185 NIILIKG-GIPG 195
>UniRef50_Q3A9R6 Cluster: 50S ribosomal protein L3; n=3;
Bacteria|Rep: 50S ribosomal protein L3 -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 209
Score = 99.1 bits (236), Expect = 1e-19
Identities = 62/204 (30%), Positives = 103/204 (50%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+KV T + D I + E P + K + Y I +G I S V K
Sbjct: 7 GRKVGMTQIFTEDGRAIP-VTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESKVNKPL 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F+ + P R+L V A G + F VG+ +D+ + +GF G +KR
Sbjct: 66 KGHFNRANVKPMRYLREIRVENIDAYEVGQEIKVDIFTVGEKVDVTGISKGKGFAGGIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
GF P +HG +K HRRPG++G+ G ARV+ G K+PG +G T++ ++++++D +
Sbjct: 126 HGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFLGRKLPGRLGMERVTIQNLEVVKVDPER 183
Query: 171 NVIWTLGVAIPGETGAMCYLFDTV 100
N++ G ++PG G++ + + V
Sbjct: 184 NLLVIKG-SVPGIRGSLLIIKEAV 206
>UniRef50_A3EVS1 Cluster: 50S ribosomal protein L3; n=1;
Leptospirillum sp. Group II UBA|Rep: 50S ribosomal
protein L3 - Leptospirillum sp. Group II UBA
Length = 207
Score = 98.3 bits (234), Expect = 2e-19
Identities = 61/196 (31%), Positives = 98/196 (50%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + + + + E P VK EK+ Y +G + P + K
Sbjct: 6 GRKLGMTQIYLPSGQAVP-VTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKPE 64
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G R++ F V + P G L F+ GD +DI ++ +GF GVMKR
Sbjct: 65 RGHQQKYAKNLYRYVREFKVEENTQAP-GNILTVEIFQEGDSLDITGQSKGKGFAGVMKR 123
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
F+G A+HG + HR PG+IGS +RV K+PGHMG++ T++ +K++ + +
Sbjct: 124 HHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKPEA 182
Query: 171 NVIWTLGVAIPGETGA 124
N+++ G AIPG G+
Sbjct: 183 NLLFIKG-AIPGSNGS 197
>UniRef50_Q9HWD5 Cluster: 50S ribosomal protein L3; n=19;
Proteobacteria|Rep: 50S ribosomal protein L3 -
Pseudomonas aeruginosa
Length = 211
Score = 97.9 bits (233), Expect = 2e-19
Identities = 61/207 (29%), Positives = 100/207 (48%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
RK G ++ ++G + T+++V N V ++ K E Y + V A
Sbjct: 8 RKCGMTRIFTEEGVSIPVTVIEVEPNRVTQF--------------KTEETDGYRAVQVTA 53
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
S VTK G F + R + F + E G + F+ G +D+ +
Sbjct: 54 GERRASRVTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA-GDQITVDLFQAGQMVDVTGE 112
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
+ +GF G +KRW F+G +HG + +HR PG+IG RV+ G KM GH+G T+
Sbjct: 113 SKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTV 172
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETG 127
+ ++I+R+D + N++ G A+PG TG
Sbjct: 173 QSLEIVRVDAERNLLLVKG-AVPGATG 198
>UniRef50_Q580R4 Cluster: Ribosomal protein L3 mitochondrial,
putative; n=6; Trypanosomatidae|Rep: Ribosomal protein
L3 mitochondrial, putative - Trypanosoma brucei
Length = 473
Score = 96.3 bits (229), Expect = 7e-19
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Frame = -2
Query: 582 ILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCR-FVVSPESALPNGTPLYATHFRVGDC 406
+ VGA N+ P K + F +P +H+C F ++P++ P GT L HF+ G
Sbjct: 185 VYVGAMNV-PVEFHKPHVAAFYKAAGVPVKHVCAGFPITPDAYAPVGTKLDVRHFKPGQE 243
Query: 405 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
+ I + D GF+GVM R GF G G ++ RRPG +G+ G+K R++PG +M G G
Sbjct: 244 VTITFQNTDYGFRGVMFRHGFDGGYVWLGDSRWQRRPGAMGTEGQK-RIYPGHRMAGQTG 302
Query: 225 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV----LPL-KRNKTAPPFP 61
T +GV + RID K ++I+ L + + G DT+ L L ++ P FP
Sbjct: 303 AAAETYQGVPVWRIDYKNSLIY-LPTLLDADVGTYVRFSDTINTKGLTLWNEHRGLPAFP 361
Query: 60 T 58
T
Sbjct: 362 T 362
>UniRef50_Q6MJ15 Cluster: 50S ribosomal protein L3; n=1;
Bdellovibrio bacteriovorus|Rep: 50S ribosomal protein L3
- Bdellovibrio bacteriovorus
Length = 220
Score = 95.9 bits (228), Expect = 9e-19
Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Frame = -2
Query: 639 YKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES 460
Y+P S +K E Y I V K G + G + +FV
Sbjct: 43 YEPWFVSQIKTNEADGYEAIQVACHPKKAKNSNKAEKGHLEKAGF---ENGAQFVKELRQ 99
Query: 459 ALPNGTPLYAT----HFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPG 292
A P GT + A GD + I SK+ +GF G +KRWGF G PASHG +K HRRPG
Sbjct: 100 AAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAGSVKRWGFAGGPASHG-SKFHRRPG 158
Query: 291 NIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 112
+ G+ RV PG K PGH+G T++ V++++I + NV+ G +PG + L
Sbjct: 159 SSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQIIAEENVLMVKG-PVPGARNTLVKL 217
>UniRef50_A6PR85 Cluster: 50S ribosomal protein L3; n=2;
Chlamydiae/Verrucomicrobia group|Rep: 50S ribosomal
protein L3 - Victivallis vadensis ATCC BAA-548
Length = 218
Score = 95.5 bits (227), Expect = 1e-18
Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNH-VIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKD 535
G+KV T QV D V+ + + P + ++VK VE+ Y + +G VTK
Sbjct: 6 GRKVGMT--QVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVTKA 63
Query: 534 YCGIFDSVGM----LPK--RHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRG 373
G G+ LP R + R E+ P GT L A F D +D+ T RG
Sbjct: 64 RAGHLAKAGVTGDKLPSVLREI-RTAAGDEAPAP-GTVLNADVFEANDYLDVVGTTKGRG 121
Query: 372 FQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKI 193
FQGV++R+ F G ASHG T RR G+IG V G +MPGHMGN RT++ +++
Sbjct: 122 FQGVVRRYRFGGGRASHGGVWT-RRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQV 180
Query: 192 LRIDTKYNVIWTLGVAIPGETGAM 121
+R+ + NV+ G AIPG G +
Sbjct: 181 VRVMAEDNVLLVKG-AIPGANGGI 203
>UniRef50_Q7WRC5 Cluster: 50S ribosomal protein L3; n=112;
Bacteria|Rep: 50S ribosomal protein L3 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 233
Score = 95.1 bits (226), Expect = 2e-18
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
RK+G ++ +DG+ + T+L V +N V + VK +E Y I V
Sbjct: 22 RKVGMTRIFTEDGESIPVTVLDVSNNRV--------------TQVKSLESDGYAAIQVTY 67
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALP---NGTPLYATHFRVGDCIDI 397
+ V K G + G L F + P A + F G +D+
Sbjct: 68 GTRRATRVVKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDV 127
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRW 217
++ +GF G +KR F ASHG +++HR PG+IG + R++PG +M GHMG+
Sbjct: 128 TGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVT 187
Query: 216 RTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
RT++ + ++R+D + ++ G A+PG G
Sbjct: 188 RTVQNLDVVRVDAERGLLMVKG-AVPGHAG 216
>UniRef50_Q97EH8 Cluster: 50S ribosomal protein L3; n=12;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
acetobutylicum
Length = 209
Score = 94.7 bits (225), Expect = 2e-18
Identities = 60/204 (29%), Positives = 99/204 (48%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
GKK+ T + + V+ + E P + K EK+ Y I VG I +V K
Sbjct: 7 GKKLGMTQIFNEEGKVVP-VTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKLVNKPL 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F + KR + F + S+ G + A F G+ +D+ + +GFQG ++R
Sbjct: 66 KGHFAKGNVELKRFVKEFRLEDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGFQGTIRR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
WG P SHG +K HR G++G + +R + KMPGHMG+ T+ V++ ++ +
Sbjct: 126 WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVAKVIPEK 184
Query: 171 NVIWTLGVAIPGETGAMCYLFDTV 100
N+I G +PG + + ++V
Sbjct: 185 NLILIKG-GVPGPNKSFVVIKNSV 207
>UniRef50_O66431 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Aquifex
aeolicus
Length = 241
Score = 94.7 bits (225), Expect = 2e-18
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Frame = -2
Query: 744 KIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAE 565
K+G + KDG + T VIK+ P Y +KS K Y + +GA
Sbjct: 9 KVGMTRVLLKDGTAIPVT--------VIKF--PVNYVVQVKSQNT---KDGYNALQIGAY 55
Query: 564 NIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATH-FRVGDCIDIRSK 388
+TK G F G+ R L F V +G L F+ GD +D+
Sbjct: 56 EAKEKHLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGI 115
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
+ RGF G MKRW F G P SHG + HR G IG + RVW G +MPGH G + +
Sbjct: 116 SKGRGFAGAMKRWDFAGFPKSHG-HRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRV 174
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAPPFPTQPFMNDVPKE 28
+G+ ++ + + N I G ++PG + + + + ++++ Q + ++ KE
Sbjct: 175 QGLFVVDVLPEENAILVKG-SVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFIIENLAKE 233
>UniRef50_P60447 Cluster: 50S ribosomal protein L3; n=85;
Gammaproteobacteria|Rep: 50S ribosomal protein L3 -
Shigella flexneri
Length = 209
Score = 92.3 bits (219), Expect = 1e-17
Identities = 59/208 (28%), Positives = 98/208 (47%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
+K+G ++ +DG + T+++V N V + VK + Y I V
Sbjct: 7 KKVGMTRIFTEDGVSIPVTVIEVEANRV--------------TQVKDLANDGYRAIQVTT 52
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
+ VTK G F G+ R L F ++ G + F +D+
Sbjct: 53 GAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGT 112
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
+ +GF G +KRW F+ A+HG + +HR PG+IG +V+ G KM G MGN T+
Sbjct: 113 SKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTV 172
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGA 124
+ + ++R+D + N++ G A+PG TG+
Sbjct: 173 QSLDVVRVDAERNLLLVKG-AVPGATGS 199
>UniRef50_Q3ZZM4 Cluster: 50S ribosomal protein L3; n=10; cellular
organisms|Rep: 50S ribosomal protein L3 -
Dehalococcoides sp. (strain CBDB1)
Length = 205
Score = 92.3 bits (219), Expect = 1e-17
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG---AENIDPSVVT 541
GKK+ T + D + + E P + VK ++ Y + +G A++I +V
Sbjct: 7 GKKIGMTQIFQEDGKA-QPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHITSAV-- 63
Query: 540 KDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGV 361
K C F +L + V +A+ G + + F+ G+ ID + RGF GV
Sbjct: 64 KGQCRGFGEFKVLREVD-----VDDIAAVSVGDQITVSDFKDGEKIDASGVSRGRGFSGV 118
Query: 360 MKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRID 181
+KRW F G P +HG + HR PG+IGS R++ G M GHMGN T+R + +L+ D
Sbjct: 119 VKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVTIRNLVVLKTD 178
Query: 180 TKYNVIWTLGVAIPG 136
+ N++ G AIPG
Sbjct: 179 AEKNLLMVKG-AIPG 192
>UniRef50_A7APA8 Cluster: 50S ribosomal protein L3, putative; n=3;
Piroplasmida|Rep: 50S ribosomal protein L3, putative -
Babesia bovis
Length = 350
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Frame = -2
Query: 576 VGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDI 397
+G NI+ +K G F G+ K H+ F S + LP G + HF G + +
Sbjct: 142 LGYRNINRQ--SKQNIGRFIKAGVGSKDHIAEFKCSSDCLLPVGHYMSVRHFTPGQWVFV 199
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGV-TKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
+ +GFQG M+RW F G ASHG K H PG+I G VW GTKM GH G
Sbjct: 200 SGWSQPKGFQGAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPD 259
Query: 219 WRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRNK 79
R + ++ RI+ N+I+ G +PG+ ++ + D + + +++N+
Sbjct: 260 PR-VTNCRVFRIEAHRNLIFLKG-TVPGDVMSVLKIRDALGICVRKNR 305
>UniRef50_Q890N9 Cluster: 50S ribosomal protein L3; n=32;
Bacteria|Rep: 50S ribosomal protein L3 - Clostridium
tetani
Length = 209
Score = 91.9 bits (218), Expect = 2e-17
Identities = 60/192 (31%), Positives = 92/192 (47%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + +N V+ + E P K VEK Y I VG I +V K
Sbjct: 7 GRKLGMTQIFDENNRVVP-VTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKLVNKPL 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F+ G+ R L F + S G + F G+ ID+ + +G+QG++KR
Sbjct: 66 KGHFEKAGVGLSRMLREFKLENVSEYQVGQEIKVDIFEAGEKIDVTGTSKGKGYQGIIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
W P SHG +K HR G++G+ AR + +M GHMGN T+ +++++ +
Sbjct: 126 WNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVVKTIPEK 184
Query: 171 NVIWTLGVAIPG 136
N+I G IPG
Sbjct: 185 NLILIKG-GIPG 195
>UniRef50_Q5P332 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 214
Score = 91.9 bits (218), Expect = 2e-17
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
RK+G ++ +DG+ V T+L V +N V + +K E Y + V
Sbjct: 8 RKVGMTRIFAEDGRSVPVTVLDVSNNRV--------------TQIKTPESDGYAAVQVTF 53
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPE--SALPNGTPLYATHFRVGDCIDIR 394
S V K G G+ L F V E + G + F VG +D+
Sbjct: 54 GKRRASRVGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVT 113
Query: 393 SKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWR 214
++ +GF GV KR F ASHG + +H PG+IG + RV+PG +M G GN
Sbjct: 114 GTSIGKGFSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTC 173
Query: 213 TLRGVKILRIDTKYNVIWTLGVAIPGETG 127
T +G++++R+D + ++ G A+PG G
Sbjct: 174 TTQGLEVVRVDVERQLLLVKG-AVPGSKG 201
>UniRef50_P94267 Cluster: 50S ribosomal protein L3; n=4; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L3 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 206
Score = 91.5 bits (217), Expect = 2e-17
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
GKKV T + N ++ + E++P K V++ Y ++ G+ ++ S V+K
Sbjct: 6 GKKVGMTQI-FQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSKPI 64
Query: 531 CGIFDSVGML-PKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMK 355
G + S+ + PKR++ + G + F+ +D+ T +GFQG MK
Sbjct: 65 KGQYKSLKDIEPKRYVIE--LKGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQGAMK 122
Query: 354 RWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTK 175
R F G P+SHG +K HR G G AR + GTKM G M +T++ ++++ ID +
Sbjct: 123 RHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLIDEE 181
Query: 174 YNVIWTLGVAIPGETGA 124
+ G A+PG G+
Sbjct: 182 KRALLVKG-AVPGAKGS 197
>UniRef50_Q5GSU4 Cluster: 50S ribosomal protein L3; n=6;
Rickettsiales|Rep: 50S ribosomal protein L3 - Wolbachia
sp. subsp. Brugia malayi (strain TRS)
Length = 241
Score = 91.1 bits (216), Expect = 3e-17
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Frame = -2
Query: 618 NVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTP 439
+V+ +K Y +++G N + K +G+ + L +S S + G
Sbjct: 43 DVRRQDKCGYNSVILGIGNFKN--IAKPQLEYLKKMGISNRCKLYESRLSDLSGIECGKK 100
Query: 438 LYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARV 259
+ HF VG +DI S ++ +GF GVMKR F G+ ASHGV+ HR G+ G + RV
Sbjct: 101 VGVNHFVVGQYLDITSYSIGKGFAGVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRV 160
Query: 258 WPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTV-LPLKRN 82
+ G +M GH+G+ T++ ++IL ID + I G +PG + ++ D + PL ++
Sbjct: 161 FKGKRMAGHLGSSRVTVQNMEILSIDHGNSTIVVKGNNVPGFKNSYVFVKDAIKKPLHKD 220
Query: 81 KTAPPFP 61
PFP
Sbjct: 221 ---VPFP 224
>UniRef50_Q7XYP4 Cluster: 50S ribosomal protein L3, chloroplast
precursor; n=3; cellular organisms|Rep: 50S ribosomal
protein L3, chloroplast precursor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 302
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = -2
Query: 495 RHLCRFVVSPESALPNGTPLYATH-FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHG 319
+HL F ++ S G L A F VGD +D+ + +GFQG ++RWG K P SHG
Sbjct: 166 KHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHG 225
Query: 318 VTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIP 139
+K+HR+ G+IG +RV+ G KM G MGN +T++ + ++ ++ + I G ++P
Sbjct: 226 -SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMMVNDEEKYIVVRG-SVP 283
Query: 138 GETGAMCYLFDT 103
G+ G + L T
Sbjct: 284 GKKGTIVELRPT 295
>UniRef50_Q7V9W2 Cluster: 50S ribosomal protein L3; n=35; cellular
organisms|Rep: 50S ribosomal protein L3 -
Prochlorococcus marinus
Length = 219
Score = 89.8 bits (213), Expect = 6e-17
Identities = 46/157 (29%), Positives = 78/157 (49%)
Frame = -2
Query: 591 YGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVG 412
Y + + + ++ K + G G R++ + V G + F G
Sbjct: 46 YSAVQIAFGAVREKLINKPFQGHLAKSGDDLLRYMSEYRVKDVGEFQLGAQITVGDFEEG 105
Query: 411 DCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGH 232
+D+ +M RGF G KR GF P SHG +K HR PG+ G+G R++PG +M G
Sbjct: 106 QKVDVSGTSMGRGFSGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGR 164
Query: 231 MGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 121
G + T RG+ I+++D+ N++ G ++PG+ G++
Sbjct: 165 YGGKKITTRGLMIMKVDSDKNLLVIKG-SLPGKPGSL 200
>UniRef50_Q6Q8Y8 Cluster: 50S ribosomal protein L3; n=1; uncultured
marine gamma proteobacterium EBAC20E09|Rep: 50S
ribosomal protein L3 - uncultured marine gamma
proteobacterium EBAC20E09
Length = 202
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/108 (39%), Positives = 63/108 (58%)
Frame = -2
Query: 447 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 268
G + A F VG +DI + +G+ GV+KR F A+HG + HR G+IG
Sbjct: 82 GKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSMQDATHGNSLAHRAHGSIGQCQTP 141
Query: 267 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 124
RVW G KM GHMGN +T++ +KI+ +D + NV++ G A+PG G+
Sbjct: 142 GRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYVKG-AVPGFNGS 188
>UniRef50_Q85FW3 Cluster: Chloroplast 50S ribosomal protein L3; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 50S ribosomal
protein L3 - Cyanidioschyzon merolae (Red alga)
Length = 182
Score = 89.0 bits (211), Expect = 1e-16
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = -2
Query: 480 FVVSPESALPNGTPL-YATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTH 304
F V SA P G L +T F++G + +++KT+ +GF G KR F P SHG +K H
Sbjct: 62 FRVKHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGYQKRHHFARGPMSHG-SKNH 120
Query: 303 RRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
R+PG+IG+G RV+PGT+M G +G + T++G++IL+I N L A+PG+ G
Sbjct: 121 RQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ---NDQMALKGAVPGKVG 176
>UniRef50_Q8EUB3 Cluster: 50S ribosomal protein L3; n=6;
Firmicutes|Rep: 50S ribosomal protein L3 - Mycoplasma
penetrans
Length = 310
Score = 87.8 bits (208), Expect = 2e-16
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 3/224 (1%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
RKIG + +DG+++ T++Q N V++ K EK Y VG
Sbjct: 7 RKIGMIQSFLEDGRRIPVTIIQAEPNVVLEN--------------KTQEKNGYVATKVGF 52
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSK 388
+ I+ + K G F + +H F S G + F GD +D ++
Sbjct: 53 QQIEEKKLNKPQKGYFKKIKTDAFKHTKEF--RNVSGYNVGDKILVDIFNSGDKVDAQAI 110
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI--GSGGEKA-RVWPGTKMPGHMGNRW 217
T +GF G +KRW FK P HG HR G+I G GG + RV G KM GH G+
Sbjct: 111 TKGKGFTGAIKRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHEL 170
Query: 216 RTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKR 85
T+ + ++ I+ + N+I G ++PG ++ L TV K+
Sbjct: 171 VTISNLTVVSIELEKNLILVKG-SVPGPVNSLVLLKTTVKSKKQ 213
>UniRef50_Q7VQE8 Cluster: 50S ribosomal protein L3; n=38;
Bacteria|Rep: 50S ribosomal protein L3 - Blochmannia
floridanus
Length = 219
Score = 87.8 bits (208), Expect = 2e-16
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + + + ++ + E P + VK EK Y + V N + K
Sbjct: 6 GRKLGMTRI-INEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLNKPK 64
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCI---DIRSKTMDRGFQGV 361
G +G+ + L F ++ + L + ++ +V CI D+ + +GF G
Sbjct: 65 LGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFT--LKVLKCINKVDVTGISKGKGFAGA 122
Query: 360 MKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRID 181
+KRW F+ ASHG + +HR PG+IG +V+ G KM GH+G T++ + ++ ID
Sbjct: 123 VKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINID 182
Query: 180 TKYNVIWTLGVAIPGETG 127
K N++ G AIPG G
Sbjct: 183 IKNNLLLVKG-AIPGVIG 199
>UniRef50_Q1NYY1 Cluster: 50S ribosomal protein L3; n=4;
Bacteria|Rep: 50S ribosomal protein L3 - Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)
Length = 206
Score = 87.4 bits (207), Expect = 3e-16
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Frame = -2
Query: 642 EYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPE 463
E P I +K EK Y +G + K F PK+ + F + +
Sbjct: 28 EAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTNKPLLFFFKKFKSTPKKKI--FELPIK 85
Query: 462 SALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGM-PASHGVTKTHRRPGNI 286
+ +G + F + ++I + +GFQGV+KR GF G+ SHG R PG+I
Sbjct: 86 GNIKSGNIIKLNCFHENELVNITGFSKGKGFQGVVKRHGFSGVGERSHGQHNRSRAPGSI 145
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 136
G+G + +RV+ GT+M G MGN+ TL+ KIL+ID N + G ++PG
Sbjct: 146 GAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILKIDLLNNFLIIKG-SVPG 194
>UniRef50_A6CGN0 Cluster: 50S ribosomal protein L3; n=2;
Bacteria|Rep: 50S ribosomal protein L3 - Planctomyces
maris DSM 8797
Length = 229
Score = 87.0 bits (206), Expect = 4e-16
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = -2
Query: 525 IFDSVGMLPKRHLCRFVVSPES-ALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRW 349
+ D G PKR + F E G L + F ID+ + RGF GVMKR
Sbjct: 86 VVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVSVFADVPFIDVIGTSKGRGFAGVMKRH 145
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYN 169
F G A+HGV + HR G+IG + +RV GT+M G G + T+R +K++R+D +
Sbjct: 146 NFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGTRMGGRYGGKQITVRHLKVVRVDEENG 205
Query: 168 VIWTLGVAIPGETG 127
V+ G A+PG G
Sbjct: 206 VLLVRG-AVPGPNG 218
>UniRef50_Q9Z7Q7 Cluster: 50S ribosomal protein L3; n=9;
Chlamydiaceae|Rep: 50S ribosomal protein L3 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 219
Score = 85.4 bits (202), Expect = 1e-15
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Frame = -2
Query: 636 KPMIKSNVKWVEKQKYGCILVGAENIDPSV------VTKDYCGIFDSVGMLPKRHLCRFV 475
+P + + +K E Y + +GAE ++ V+K G G R L + V
Sbjct: 33 EPNVVTQIKTKESDGYFSLQIGAEEMNAPAHTITKRVSKPKLGHLRKAGGRVFRFL-KEV 91
Query: 474 VSPESALPNGTPLYATH----FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKT 307
E AL NG L F +D+R + +GFQGVMK++GF+G P SHG +
Sbjct: 92 RGSEEAL-NGVSLGDAFGLEVFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHG-SGF 149
Query: 306 HRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
HR G+IG R +PG+K P HMG T++ ++++++D + V+ G AIPG G
Sbjct: 150 HRHAGSIGMRSTPGRCFPGSKRPSHMGAENVTVKNLEVIKVDLEKKVLLVKG-AIPGARG 208
Query: 126 AM 121
++
Sbjct: 209 SI 210
>UniRef50_P75580 Cluster: 50S ribosomal protein L3; n=4;
Mycoplasma|Rep: 50S ribosomal protein L3 - Mycoplasma
pneumoniae
Length = 287
Score = 84.6 bits (200), Expect = 2e-15
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Frame = -2
Query: 636 KPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESA 457
+P + VK K KY L+ + ++ + K G F+ + P +HL + +
Sbjct: 32 EPNQVAGVKTEAKDKYSATLLSFDTVENKKLNKPQQGFFEKNNLKPTKHLQE--IRNMTG 89
Query: 456 LPNGTPLYATH-FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI-- 286
G + + F+VG+ +D+ + + RGF G +KRW FK P HG HR G++
Sbjct: 90 FEMGQQITPQNLFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGHGAGYPHRFQGSVQA 149
Query: 285 GSGGEKA-RVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 121
G GG A RV+ G KM GH G+ T++ ++I+ D + N++ + AI G G +
Sbjct: 150 GRGGASAQRVFKGKKMSGHYGHEKVTVQNLRIVGFD-EANMLVLVSGAIAGPEGGV 204
>UniRef50_A6G3Z5 Cluster: 50S ribosomal protein L3; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L3 - Plesiocystis pacifica SIR-1
Length = 223
Score = 82.6 bits (195), Expect = 9e-15
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Frame = -2
Query: 747 RKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGA 568
+KIG + +DG +V T+L N V + + VE+ Y + +
Sbjct: 10 KKIGMTEFYKEDGTRVPVTVLLAKGNVVTAH--------------RTVERDGYTALQLAF 55
Query: 567 ENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN--GTPLYATHFRVGDCIDIR 394
++ S ++K G F + PKR + F V+ + + G+ + + F G +D+
Sbjct: 56 DDQKASRLSKPKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVT 115
Query: 393 SKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWR 214
+ +GFQGVMKR G +G +HG + +R G+IG RV PG +M G MGN
Sbjct: 116 GTSKGKGFQGVMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETV 175
Query: 213 TLRGVKILRIDTKYNVIWTLGVAIPG 136
T++ +++ ++ +I G AIPG
Sbjct: 176 TVQNLEVAKVIADKGLILVKG-AIPG 200
>UniRef50_O83219 Cluster: 50S ribosomal protein L3; n=2;
Treponema|Rep: 50S ribosomal protein L3 - Treponema
pallidum
Length = 208
Score = 81.4 bits (192), Expect = 2e-14
Identities = 53/168 (31%), Positives = 81/168 (48%)
Frame = -2
Query: 615 VKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPL 436
+K VE+ Y +++G + S ++K Y G F +P + R + G L
Sbjct: 37 LKDVERFGYSAVILGTGCMKKSRISKPYAGQFAE--RIPPVRVMREFRGFTLDVSVGQVL 94
Query: 435 YATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVW 256
+D+ + + +GFQGV+KRWGF G +SHG +K HR G+ G R +
Sbjct: 95 DVRVLESVRYLDVCALSKGKGFQGVVKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTF 153
Query: 255 PGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 112
KMPG MG T++ ++I RID V+ G A+PG A +L
Sbjct: 154 KNVKMPGRMGAERVTVQNLRIERIDVGLGVVMVRG-AVPGRNKATVFL 200
>UniRef50_Q7UN20 Cluster: 50S ribosomal protein L3; n=2;
Planctomycetaceae|Rep: 50S ribosomal protein L3 -
Rhodopirellula baltica
Length = 228
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/133 (34%), Positives = 66/133 (49%)
Frame = -2
Query: 501 PKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASH 322
P+R + F S E+ + G L F +DI + RGF GVMKR F G A+H
Sbjct: 95 PQRFVREFRGSSEANV--GDTLTVEQFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATH 152
Query: 321 GVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAI 142
GV K HR G G +R + G +M G GN T R ++++R+D + N++ G A+
Sbjct: 153 GVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKVTTRNLEVVRVDAENNLLMIRG-AV 211
Query: 141 PGETGAMCYLFDT 103
PG G + T
Sbjct: 212 PGPNGGFVSIRQT 224
>UniRef50_Q81VT0 Cluster: 50S ribosomal protein L3; n=9;
Bacteria|Rep: 50S ribosomal protein L3 - Bacillus
anthracis
Length = 210
Score = 81.0 bits (191), Expect = 3e-14
Identities = 54/192 (28%), Positives = 90/192 (46%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + + +I + P + K E Y I +G E+ + K
Sbjct: 7 GRKIGMTQVFAENGELIP-VTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPE 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G PKR + + L G + F G+ +D+ + +GFQGV+KR
Sbjct: 66 QGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
G P SHG ++ HRRPG++G RV+ G K+ G MG T++ ++I+++DT+
Sbjct: 126 HGQSRGPMSHG-SRYHRRPGSMGPVAPN-RVFKGKKLAGRMGGDQVTIQNLEIVQVDTER 183
Query: 171 NVIWTLGVAIPG 136
N++ G +PG
Sbjct: 184 NLLLVKG-NVPG 194
>UniRef50_A6GV22 Cluster: 50S ribosomal protein L3; n=2; cellular
organisms|Rep: 50S ribosomal protein L3 - Limnobacter
sp. MED105
Length = 126
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/107 (35%), Positives = 60/107 (56%)
Frame = -2
Query: 447 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 268
G + A F G +D+ T +GF G +KR F ASHG + +H PG+IG +
Sbjct: 8 GAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIGMAQDP 67
Query: 267 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
RV+PG +M G +GN RT + ++++R+D + ++ G A+PG G
Sbjct: 68 GRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKG-AVPGSKG 113
>UniRef50_A5K6P7 Cluster: 50S ribosomal protein L3, putative; n=5;
Plasmodium|Rep: 50S ribosomal protein L3, putative -
Plasmodium vivax
Length = 316
Score = 79.4 bits (187), Expect = 9e-14
Identities = 40/120 (33%), Positives = 67/120 (55%)
Frame = -2
Query: 495 RHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGV 316
++ C ++P G + ++ +++R + +GF GV+KRWGF+ P +HG
Sbjct: 165 KNTCSLTLTPPQNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFCGVIKRWGFRRGPMTHG- 223
Query: 315 TKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 136
+ HR+PG+IG+ RV G KMPG GN++ T+ +K+L ++ + N I G IPG
Sbjct: 224 SSHHRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLGLNLERNEILVSG-CIPG 282
>UniRef50_Q8KTP2 Cluster: 50S ribosomal protein L3; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L3 -
Tremblaya princeps
Length = 205
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/109 (35%), Positives = 59/109 (54%)
Frame = -2
Query: 447 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 268
G P R G + I+++++ +GF GVMKR GF ASHG +K HR G+ G +
Sbjct: 95 GRPHAKAILRAGQLVSIKARSVGKGFSGVMKRHGFSSGRASHGTSKAHRTLGSTGMSQDP 154
Query: 267 ARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAM 121
RV+PG +MPG MG T R + + + ++ + G IPG G++
Sbjct: 155 GRVFPGKRMPGRMGCEHATARNLMVEHV--AHDFVMVRG-GIPGHAGSI 200
>UniRef50_Q4UBR8 Cluster: 50S ribosomal protein L3, putative; n=2;
Theileria|Rep: 50S ribosomal protein L3, putative -
Theileria annulata
Length = 328
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/98 (42%), Positives = 59/98 (60%)
Frame = -2
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
T +GFQGV+KR GFK P SHG +K HRRPG+IG+ V PG KMPG MG + T
Sbjct: 226 TKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSIGASTTPGCVKPGKKMPGRMGGKRCTF 284
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP 94
R +KIL ++ + ++++ G + G G+ + V P
Sbjct: 285 RKLKILGLNPETSLLYVKG-HVAGPKGSYVTVTSDVQP 321
>UniRef50_Q8Y440 Cluster: 50S ribosomal protein L3; n=19;
Bacteria|Rep: 50S ribosomal protein L3 - Listeria
monocytogenes
Length = 209
Score = 77.8 bits (183), Expect = 3e-13
Identities = 56/197 (28%), Positives = 90/197 (45%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+KV T + + +I E + ++ K VE Y + +G E+ + K
Sbjct: 7 GRKVGMTQVFTENGELIPVTVIEAAQNVVLQK-KTVETDGYEAVQIGFEDKRAILSNKPE 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G PKR + F G + F GD ID + +GFQGV+KR
Sbjct: 66 QGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGFQGVIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
G P +HG ++ HRRPG++G RV+ +PG MG T++ ++I+++D +
Sbjct: 126 HGQSRGPMAHG-SRYHRRPGSMGPVAPN-RVFKNKLLPGRMGGEQITIQNLEIVKVDVEK 183
Query: 171 NVIWTLGVAIPGETGAM 121
NV+ G +PG A+
Sbjct: 184 NVLLVKG-NVPGAKKAL 199
>UniRef50_Q5FM90 Cluster: 50S ribosomal protein L3; n=31;
Bacteria|Rep: 50S ribosomal protein L3 - Lactobacillus
acidophilus
Length = 212
Score = 76.6 bits (180), Expect = 6e-13
Identities = 56/211 (26%), Positives = 96/211 (45%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+KV T + D ++ + E P + VK VE Y + +G ++ + K
Sbjct: 7 GRKVGMTQIFTKDGILVP-VTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVLSNKPE 65
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G D PKR + G+ + F+ GD +++ + G+QG +KR
Sbjct: 66 KGHADKAKTSPKRFIREIRGVELKDYEVGSEVTVDTFKEGDVVNVTGTSRGHGYQGNIKR 125
Query: 351 WGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKY 172
WG P +HG ++ HR PG++GS RV G ++PGHMG + T+ + I ++
Sbjct: 126 WGQSRGPETHG-SRYHRIPGSMGS--IINRVPKGKRLPGHMGVKKVTIENLVIEKVVADK 182
Query: 171 NVIWTLGVAIPGETGAMCYLFDTVLPLKRNK 79
NV+ G +PG ++ + +K +K
Sbjct: 183 NVLMIKG-NVPGAKNSLIVVKTASKAVKADK 212
>UniRef50_Q2IJD0 Cluster: 50S ribosomal protein L3; n=2;
Anaeromyxobacter|Rep: 50S ribosomal protein L3 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 236
Score = 75.4 bits (177), Expect = 1e-12
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Frame = -2
Query: 612 KWVEKQKYGCILVGAENIDPSV---VTKDYCGIFDSVGMLPKRHLCRFVVSPESALPN-- 448
K EK Y +++G +D ++K G+F G RH+ V L +
Sbjct: 39 KTAEKDGYDAVVIGFGVVDEKHAHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKLLGDLK 98
Query: 447 -GTPLYATH-FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPA-SHGVTKTHRRPGNIGSG 277
G L F+ ID+ T RGF GVMKRW KG S + HR G IG
Sbjct: 99 AGDVLTVDKVFKANQRIDVAGVTKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQR 158
Query: 276 GEKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYL 112
+VW G +PGH G T++ + ++ I+ + NV+ G A+PG + ++
Sbjct: 159 KTPGKVWKGKHLPGHYGVDNITIQNLTVVGIEPEQNVLLVSG-AVPGHADGLLFV 212
>UniRef50_Q1ISC2 Cluster: 50S ribosomal protein L3; n=5;
Bacteria|Rep: 50S ribosomal protein L3 - Acidobacteria
bacterium (strain Ellin345)
Length = 244
Score = 72.1 bits (169), Expect = 1e-11
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHV-IKYIPPEEYKPMIKSNVKWVEKQKYGCILVG-AENIDPSVVTK 538
GKK+ T Q+ D+ ++ + + P + + K K Y VG E + + +TK
Sbjct: 7 GKKIGMT--QLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKETRLTK 64
Query: 537 DYCGIFDSVGMLPKRHLCRFVV---SPESALPNGT-----PLYATHFRVGDCIDIRSKTM 382
G + P R L F + P A NG + F +D+ +
Sbjct: 65 AQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVTGVSK 124
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTLRG 202
RGF GV+KR F G SHG + G+IGS +RV+ G +M GHMG T+R
Sbjct: 125 GRGFAGVVKRHKFAGGARSHG--SMFQISGSIGSSAFPSRVFKGMRMAGHMGQDQVTVRN 182
Query: 201 VKILRIDTKYNVIWTLGVAIPGETGAMCYL 112
++IL ID N++ G A+PG A ++
Sbjct: 183 LRILGIDKDENLLVVEG-AVPGPKDATVFI 211
>UniRef50_Q9TLT2 Cluster: Chloroplast 50S ribosomal protein L3; n=1;
Cyanidium caldarium|Rep: Chloroplast 50S ribosomal
protein L3 - Cyanidium caldarium
Length = 215
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/93 (36%), Positives = 58/93 (62%)
Frame = -2
Query: 405 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
+ + + T+ +GF G K+ F SHG +K+HRRPG+IG+G RV+PG KM G +G
Sbjct: 110 VQVSAYTIGKGFAGYQKKHKFSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLG 168
Query: 225 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETG 127
R+++ + +L++D N ++ L ++PG+ G
Sbjct: 169 FSRRSIKNLLVLKVDLT-NKLFLLKGSVPGKYG 200
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 71.3 bits (167), Expect = 2e-11
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Frame = -2
Query: 711 GKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDY 532
G+K+ T + + + + E KP + ++ K Y + +GA + K
Sbjct: 6 GQKIGMTQIYTAQGNKVP-VTVIEVKPNVVTHKFENTKDGYVALQLGAFDQKERKFKKPE 64
Query: 531 CGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKR 352
G F PKR + + G + A F+ G+ +D+ + +GF G +KR
Sbjct: 65 IGHFKKSNTTPKRFVKE--IRNMDGYNLGDLVKADIFKSGELVDVTGISKGKGFAGTIKR 122
Query: 351 WGFKGMPASHGV---TKTHRRPGNIGS-GGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 184
K P SHG +K R+ G+IG G K V G MPGH+GN RT++ ++++++
Sbjct: 123 HNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNK--VLKGMTMPGHLGNVQRTIQNLEVVKV 180
Query: 183 DTKYNVIWTLGVAIPGETGAMCYL 112
D K N++ G ++PG C+L
Sbjct: 181 DIKNNILLVKG-SVPGPKN--CFL 201
>UniRef50_A7AWX6 Cluster: Ribosomal protein L3 domain containing
protein; n=1; Babesia bovis|Rep: Ribosomal protein L3
domain containing protein - Babesia bovis
Length = 323
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = -2
Query: 405 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
+ + T +GF GV+KR GF P SHG +K HR+PG+IG+ V PG +MPG MG
Sbjct: 214 VKVTGITKGKGFAGVIKRHGFARGPMSHG-SKHHRKPGSIGASTTPGCVKPGKRMPGRMG 272
Query: 225 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 124
N+ T R +++L I+ + ++++ + + G G+
Sbjct: 273 NKRCTFRKLRVLGINPETSLMYVKAL-VAGANGS 305
>UniRef50_Q7M8D4 Cluster: 50S ribosomal protein L3; n=23;
Epsilonproteobacteria|Rep: 50S ribosomal protein L3 -
Wolinella succinogenes
Length = 192
Score = 69.7 bits (163), Expect = 7e-11
Identities = 41/94 (43%), Positives = 54/94 (57%)
Frame = -2
Query: 405 IDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
+ + +T RGF GVMKRW F G PA+HG + RR G+IG+ RV PG KM G G
Sbjct: 94 VKVSLQTKGRGFTGVMKRWNFAGGPAAHG-HRFKRRTGSIGNREWPGRVQPGKKMAGQYG 152
Query: 225 NRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGA 124
N T++ +I+ D + N I L +IPG GA
Sbjct: 153 NEKVTVQN-EIVSFDAE-NKILVLKGSIPGFNGA 184
>UniRef50_Q8I4X7 Cluster: 50S ribosomal protein L3, putative; n=7;
Plasmodium|Rep: 50S ribosomal protein L3, putative -
Plasmodium falciparum (isolate 3D7)
Length = 341
Score = 61.3 bits (142), Expect = 2e-08
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Frame = -2
Query: 618 NVKWVEKQKYGCILVGAENIDPSVVTKDYCGIF--DSVGMLPKRHLCRFVVSPESALPNG 445
N K + K Y + +G N++ +K+ G F +G + K + F + + LP
Sbjct: 115 NQKTISKNGYEALELGVGNMNVIKQSKNNIGNFIKRKLGFIHK--IKEFKCTSDCFLPIH 172
Query: 444 TPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGV-TKTHRRPGNIGSGGEK 268
HF G + I S ++GF G MK+W F G SHG +K HR G++ G
Sbjct: 173 HKFSCRHFSPGQNLFISSGIKNKGFCGAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTI 232
Query: 267 ARVWPGTKMPGHMGNRWRT-LRGVKILRIDTKYNVIWTLG 151
V+ KM H+G + K+ RI++ N+++ G
Sbjct: 233 NIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKG 272
>UniRef50_A5KRQ1 Cluster: 50S ribosomal protein L3; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L3 - candidate division TM7 genomosp. GTL1
Length = 180
Score = 60.9 bits (141), Expect = 3e-08
Identities = 44/166 (26%), Positives = 77/166 (46%)
Frame = -2
Query: 633 PMIKSNVKWVEKQKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESAL 454
P + VK +K Y + +G + ++ G + + PK + V+ +
Sbjct: 8 PCAVTQVKTADKDGYNAVQIGYG--EGKNLSNAVAGHVKAAKVTPKV-IREIRVNELDEI 64
Query: 453 PNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG 274
G L F VGD +D+ + +GF G +KR F +HG R+ G+IGS
Sbjct: 65 KVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRKVGSIGSMY 124
Query: 273 EKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPG 136
+ +++ G +M G MG+ T++ + + ID + N+I G A+PG
Sbjct: 125 PQ-KIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKG-AVPG 168
>UniRef50_A6QCP8 Cluster: 50S ribosomal protein L3; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L3 -
Sulfurovum sp. (strain NBC37-1)
Length = 193
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/88 (43%), Positives = 47/88 (53%)
Frame = -2
Query: 387 TMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRTL 208
T RGF G MKR F G P SHG + RR G+IG+ RV G KMPG GN T+
Sbjct: 101 TKGRGFSGGMKRHNFGGGPGSHG-HRFGRRIGSIGNAEWPGRVQKGKKMPGQYGNTKVTV 159
Query: 207 RGVKILRIDTKYNVIWTLGVAIPGETGA 124
+ ++ D + N I L +IPG GA
Sbjct: 160 KN-DVVSFDAE-NGILVLKGSIPGHNGA 185
>UniRef50_Q9AIN8 Cluster: 50S ribosomal protein L3; n=4; Candidatus
Carsonella ruddii|Rep: 50S ribosomal protein L3 -
Carsonella ruddii
Length = 136
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -2
Query: 378 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
+GFQGV+KRW FK SHG + ++R G+ G + RV+ KMPG MGN+
Sbjct: 49 KGFQGVVKRWNFKTKDKSHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNK 101
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F+ GD ID+ + T +GFQG +KR+G + MP H K H R G++G +K + T
Sbjct: 188 FKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGP--QKPAIMFYTP 245
Query: 243 MPGHMGNRWRTLRGVKILRI 184
PG +G RT +IL++
Sbjct: 246 FPGQLGFHQRTEYNKRILKV 265
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/80 (37%), Positives = 39/80 (48%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F+ G+ +D T +GFQG +KRWG K H R G+IG K +W
Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMW-SVP 248
Query: 243 MPGHMGNRWRTLRGVKILRI 184
MPG MG RT +IL+I
Sbjct: 249 MPGQMGYHQRTEYNKRILKI 268
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/86 (38%), Positives = 44/86 (51%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F+ G +D+ + T +GFQGV+KR F H K R+ G IGS G R++P
Sbjct: 183 FKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRKVGAIGSRG-PGRIFPTVP 239
Query: 243 MPGHMGNRWRTLRGVKILRIDTKYNV 166
MPG MG RT I++I NV
Sbjct: 240 MPGQMGYHRRTEYNKLIIKIGEPLNV 265
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/81 (38%), Positives = 40/81 (49%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F G +D+ + T +GFQGV+KRWG K +P H K RR G G ++ W T
Sbjct: 197 FEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARSHG--RSTFWE-TP 253
Query: 243 MPGHMGNRWRTLRGVKILRID 181
G G RT +IL ID
Sbjct: 254 QAGQTGFHRRTEYNKRILMID 274
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/80 (40%), Positives = 40/80 (50%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
FR G IDI T +GFQGV+KR+G K +P H K R+ IGS T
Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRSPGFGTMSETP 307
Query: 243 MPGHMGNRWRTLRGVKILRI 184
PG MG RT +I++I
Sbjct: 308 QPGQMGFHRRTEYNKRIIKI 327
>UniRef50_P53307 Cluster: Uncharacterized protein YGR219W; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGR219W - Saccharomyces cerevisiae (Baker's yeast)
Length = 113
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +1
Query: 160 PNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMRSRHT 339
PNNIIF ++ +N N + V+H++RH S + T T SM +MR T
Sbjct: 37 PNNIIFIVDFQNFNILDSNMLVSHMTRHLSSWQYPTWVLVLTIRTTVSMHNRCTMRCSQT 96
Query: 340 LKTPPLHHSLKT 375
L++ P HH+ KT
Sbjct: 97 LESIPFHHTSKT 108
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -2
Query: 414 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPG 235
G +D+ T +GFQGV+KR+G K +P H K RR G G + P PG
Sbjct: 217 GKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHRKGSRRVGARSWGKGTSSYVP---QPG 273
Query: 234 HMGNRWRTLRGVKILRI 184
MG RT ++L I
Sbjct: 274 QMGYHRRTDYNKRVLMI 290
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
+ G +D+ T +G+QGV+KR+G K + SH +K R+ GN+G G V +
Sbjct: 215 YEAGKELDVVGITKGKGWQGVIKRFGVKLL--SHKNSKRRRQIGNMGDFG-TGYVRKTIR 271
Query: 243 MPGHMGNRWRTLRGVKILRI 184
G MG RT +ILRI
Sbjct: 272 QAGQMGYHKRTELNKRILRI 291
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 42.7 bits (96), Expect = 0.009
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F G+ +D+ + T +GFQGV+KRW G+ T+ ++ +IGS G +RV
Sbjct: 196 FDEGEIVDVSAITKGKGFQGVVKRW---GVTIQDRKTQRKQKGRHIGSIGPITPSRVRWT 252
Query: 249 TKMPGHMGNRWRTLRGVKILRI 184
M G +G RT +IL+I
Sbjct: 253 VPMAGQVGYHQRTEHNKRILKI 274
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = -2
Query: 447 GTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 268
G + FR G+ D T +G QG +KRWG + H RR GN+G
Sbjct: 184 GVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNP 242
Query: 267 ARVWPGTKMPGHMGNRWRTLRGVKILRID 181
+RV G G RT +++ I+
Sbjct: 243 SRVRSTVPQQGQTGYHQRTELNKRLIDIN 271
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 41.5 bits (93), Expect = 0.021
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F+ G ID+ T +GF GV+KR+ +P H K R+ IG+ G T
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTP 265
Query: 243 MPGHMGNRWRTLRGVKILRI 184
PG +G RT +I++I
Sbjct: 266 QPGQLGFHRRTEYNKRIIKI 285
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 41.1 bits (92), Expect = 0.028
Identities = 26/91 (28%), Positives = 37/91 (40%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F G+ +D+ + T G QG + RWG H T R GN+G W +
Sbjct: 193 FAPGELVDVSAITKGYGTQGPVVRWGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQ 252
Query: 243 MPGHMGNRWRTLRGVKILRIDTKYNVIWTLG 151
+ G G RT +IL++ K I G
Sbjct: 253 L-GQTGYHQRTEYNKRILKMGDKAEEITPAG 282
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 39.9 bits (89), Expect = 0.065
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -2
Query: 414 GDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMP- 238
G +D+ S T +GF G ++R+G K +P + + HRR IG+ G W +P
Sbjct: 189 GKFVDVLSVTKGKGFTGHVQRFGVKLLPRKN---RKHRR--MIGTLGPWHPDWVRNTVPQ 243
Query: 237 -GHMGNRWRTLRGVKILR 187
G MG + RT+ V++L+
Sbjct: 244 AGQMGYQQRTISNVRVLK 261
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 39.5 bits (88), Expect = 0.086
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTK 244
F G ID+ T G QGV++R+G K + SH +K R+ GN+G G V +
Sbjct: 195 FESGSDIDVIGVTKGYGNQGVVRRFGVKLL--SHKNSKRRRQIGNMGDFG-TGYVRKTIR 251
Query: 243 MPGHMGNRWRTLRGVKILRI 184
G G RT +ILRI
Sbjct: 252 QAGQTGYHQRTEYNKRILRI 271
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIG 283
F G +D+ + T +G+QGV+KRW K H KT R G++G
Sbjct: 191 FETGASVDVAAITKGKGWQGVLKRWNVK--KKQHKSRKTVREVGSLG 235
>UniRef50_A3XPQ6 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Leeuwenhoekiella
blandensis MED217|Rep: Putative outer membrane protein,
probably involved in nutrient binding - Leeuwenhoekiella
blandensis MED217
Length = 1057
Score = 35.5 bits (78), Expect = 1.4
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Frame = -2
Query: 633 PMIKSNVKWVEK--QKYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPES 460
P++ NV W+E+ + YG N++ + Y + S+G + L F P
Sbjct: 317 PLLYPNVNWMEEVFKSYGRNRQALINVNGGAESARY---YVSLGYYNETGL--FQTDPNV 371
Query: 459 ALPNGTPLYATHFRVGDCIDIRSKT-MDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI- 286
+ +GT +F ID+ T ++ G QG + + G P S G+T + G
Sbjct: 372 SYDSGTGFERFNFTSNLTIDLTKTTDINVGIQGYLSDGNYPGTPTSPGITLEDQIFGTAL 431
Query: 285 -GSGGEKARVWPGTKMPGHMGN 223
E ++PG +PG N
Sbjct: 432 EAPPVEYPVLYPGGFVPGKSAN 453
>UniRef50_Q5AG30 Cluster: Putative uncharacterized protein; n=3;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 814
Score = 35.5 bits (78), Expect = 1.4
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +1
Query: 151 TQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSM--SFGDSM 324
+Q PNN + N SPSV H S + F+TR + ++ S S
Sbjct: 119 SQLPNNSSSSLFINNRTRQPNSPSVNSQRGHSKSPSKNSHFSTRDEPIKENLKPSSESSS 178
Query: 325 RSRHTLKTP--PLHHSLKTSIHSFRSNVNTIPNSKM 426
S H+L++P PL K S S ++ P+S M
Sbjct: 179 ASTHSLESPITPLIRKTKPSSQSIQNQQQKSPSSSM 214
>UniRef50_A5DTI2 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 319
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/79 (31%), Positives = 33/79 (41%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMR 327
N NN NT N NTT + S + S CS ++ TT T T + DS +
Sbjct: 13 NISISNNSNNSNNTTNTNTTSTTKSFSSSSSSSCSSRSTT--TTTTTCTNDNNITSDSNK 70
Query: 328 SRHTLKTPPLHHSLKTSIH 384
+ H T H + SIH
Sbjct: 71 NDHASDTIYFHSTQMQSIH 89
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 35.5 bits (78), Expect = 1.4
Identities = 29/94 (30%), Positives = 41/94 (43%)
Frame = -2
Query: 465 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 286
++ L P+++ F + ID+ + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 184
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>UniRef50_Q4DGU3 Cluster: Helicase-like protein, putative; n=1;
Trypanosoma cruzi|Rep: Helicase-like protein, putative -
Trypanosoma cruzi
Length = 929
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 347 PHLFITP*KPLSIVFDRMSIQSPTLK*VAYNGVPFGKADSGDTTNLQRCLFGSIPTLSN 523
PHL ++P L+ ++ +PTL+ V Y+G G+A T + C+F + P + N
Sbjct: 264 PHLIVSPLSTLTGWTRELARWAPTLRVVKYHGERKGRASIRTTRGNRHCVFVTTPAVFN 322
>UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio
rerio|Rep: Novel collagen protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1194
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 223
+ +T GFQG+ G G+P + GVT PG++G G K + P +PG G+
Sbjct: 478 QGETGPTGFQGLP---GPSGLPGAEGVTGKQGPPGSLGPQGSKGKQGP-IGLPGSPGS 531
>UniRef50_A4A686 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 226
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +1
Query: 169 IIFCINTENLNTTQCSPSVTHVSRHFCSRPNSCFFTTRTNITRSSMSFGDSMRSRHTLKT 348
I CI +L T + VTH++RH + ++ T N R ++ G ++ S +
Sbjct: 45 ITLCIYAHDLKTLNRNVCVTHLARHLLAFEDATRGLTLANRARRTVRQGVTVGSILHAEV 104
Query: 349 PPLHHSLKTSIHSFRSNVN 405
P L+ +L+T SN++
Sbjct: 105 PTLNDALETFTLGLASNIH 123
>UniRef50_A2FG46 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1008
Score = 34.3 bits (75), Expect = 3.3
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = -2
Query: 672 NHVIKYIPPEEYKPMIKSNVKWVEKQKY 589
NH+ +IPPEEY+ ++ +NV++ +K+ +
Sbjct: 241 NHISPFIPPEEYECLMPNNVEYFKKKSF 268
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 33.9 bits (74), Expect = 4.3
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F+ + D+ + T GF GV+KRWG +P KTHR + G +RV
Sbjct: 265 FQQSEACDVCAVTKGHGFTGVVKRWGVACLP-----RKTHRGLRKVACIGAWHPSRVMYT 319
Query: 249 TKMPGHMGNRWRTLRGVKILRI 184
G G RT KI ++
Sbjct: 320 VARAGQHGYHHRTHLNKKIYQL 341
>UniRef50_A1XVT1 Cluster: Fibrillar collagen precursor; n=1; Hydra
vulgaris|Rep: Fibrillar collagen precursor - Hydra
attenuata (Hydra) (Hydra vulgaris)
Length = 1476
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK 268
+RG G+ G KG P G T + RPG+ G+ G+K
Sbjct: 580 ERGLPGIPGLQGMKGSPGLSGATGENGRPGDKGTQGDK 617
>UniRef50_UPI0000E46F0A Cluster: PREDICTED: similar to G/T
mismatch-specific thymine DNA glycosylase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
G/T mismatch-specific thymine DNA glycosylase -
Strongylocentrotus purpuratus
Length = 588
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = -2
Query: 468 PESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPG 292
P ALP P H ++S+ +D + G M GF G P HG + R PG
Sbjct: 288 PHPALPPPPPQQVPHHP-----GVKSEPVDGAYHGGMGGCGFPGQPPMHGGVEIKREPG 341
>UniRef50_A7TEL2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1686
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 723 WCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQ 595
W G + T+ + + N +I YIP + P+I+S +K + Q
Sbjct: 506 WESQGNEKDTSYIYNISNLIISYIPERAFLPLIESKIKVKDSQ 548
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 33.5 bits (73), Expect = 5.7
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>UniRef50_Q1DYA1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2124
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 402 DIRSKTMDRGFQGVMKRWG-FKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
D+ K +DR +GV K+WG F + G+ + R+ G + E G + PG +G
Sbjct: 2036 DVTDKDIDRFAEGVFKQWGLFSSEEENPGLGRLSRKNGKMADNSESGL---GLEEPGSVG 2092
>UniRef50_Q4RQM9 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 760
Score = 32.7 bits (71), Expect = 9.9
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 160 PNNIIFCINTENLNTTQCSPSVTH-VSRHFCSRPNSC--FFTTRTNITRSSMSFGDS-MR 327
P+ + +N+ + T+ ++T VS P+ C F R + RS SF S R
Sbjct: 649 PHKQLLVVNSPTVKPTERKQTLTGTVSDRGLRSPSPCLWFCLNRVHKGRSGKSFSRSNSR 708
Query: 328 SRHTLKTPPLHHS 366
+R T + PP HH+
Sbjct: 709 NRSTSRPPPCHHN 721
>UniRef50_Q2LSF4 Cluster: Seceted metal-dependent hydrolase of the
beta-lactamase superfamily III; n=1; Syntrophus
aciditrophicus SB|Rep: Seceted metal-dependent hydrolase
of the beta-lactamase superfamily III - Syntrophus
aciditrophicus (strain SB)
Length = 319
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 563 FSAPTNIQPYFCFSTHFTLDFIIGLYS 643
F TN +P + F THF LD IIGL++
Sbjct: 115 FINDTNTRPLYLFLTHFHLDHIIGLHT 141
>UniRef50_A2Z8E1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 138
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 738 GNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILV 574
G+ + CK TL D+H + PPE + + K ++K V+ +Y +L+
Sbjct: 83 GSLKVVCKSAIVGHCTLACSCDSHFLHGFPPERFDSLNKRDIKTVDNWRYATVLL 137
>UniRef50_Q4DY12 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1942
Score = 32.7 bits (71), Expect = 9.9
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -2
Query: 273 EKARVWPGTKMPGHMGNRWRTLRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLP 94
+ A +WPGT+ P + + + ++L + + +W+ G E+ + C F ++
Sbjct: 1323 QSACIWPGTQEPRYAPQQ----QPYQLLSMAASGHPLWSEGA---DESSSTCNEF--IVH 1373
Query: 93 LKRNKTAPPFPTQPFMNDVPK 31
K+ K+A PT + DVPK
Sbjct: 1374 EKKRKSASSLPTFSYYTDVPK 1394
>UniRef50_Q28XA1 Cluster: GA12387-PA; n=1; Drosophila
pseudoobscura|Rep: GA12387-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 415
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 157 CPNNIIFCINTENLNTTQCSPSVTHVSRHF-CSRPNSCFFTTRTNI 291
C +N + + T +++TT CSP+ T + + F CS N+C T T++
Sbjct: 93 CASNYVNPVAT-SMSTTMCSPAATALQKLFNCSVGNACQNVTHTHV 137
>UniRef50_A7T2G6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 388
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 337 YACFSWSHQNS*KTW*YWFW--W*KSTSLA-WNKNAWTHG 227
+AC+ W+ W W W W + T A W +N+WT G
Sbjct: 45 WACWRWNSWTRGTWWACWRWNSWTRGTWWACWRRNSWTRG 84
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 337 YACFSWSHQNS*KTW*YWFW--W*KSTSLA-WNKNAWTHG 227
+AC+ W+ W W W W + T A W +N+WT G
Sbjct: 157 WACWRWNSWTRGTWWACWKWNSWTRGTWWACWRRNSWTRG 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,272,300
Number of Sequences: 1657284
Number of extensions: 17372572
Number of successful extensions: 47560
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 44291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47383
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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