Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o02r
(751 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 26 0.37
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 25 0.49
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 25 0.49
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 25 0.65
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 25 0.65
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 4.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 4.6
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 4.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 4.6
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 4.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.0
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 142 YCNTQCPNNIIFCINTENLNTTQCSPSVTHVSRH 243
+ + C N I C ++ LN C TH + H
Sbjct: 53 FTGSNCQNRINLCDSSPCLNGATCQDHTTHYTCH 86
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 25.4 bits (53), Expect = 0.49
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 244 FCSRPNSCFFTTR 282
+CS PNSC TTR
Sbjct: 482 YCSLPNSCALTTR 494
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 25.4 bits (53), Expect = 0.49
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 244 FCSRPNSCFFTTR 282
+CS PNSC TTR
Sbjct: 489 YCSLPNSCALTTR 501
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 25.0 bits (52), Expect = 0.65
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 524 YLTVLECCQKGTSADLLYHQNL---LYQMALHYMRLILELGIVLTFD 393
+L + C+ G Y +L LY + LH++ L LGI L +D
Sbjct: 152 FLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYD 198
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 25.0 bits (52), Expect = 0.65
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 524 YLTVLECCQKGTSADLLYHQNL---LYQMALHYMRLILELGIVLTFD 393
+L + C+ G Y +L LY + LH++ L LGI L +D
Sbjct: 152 FLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNLSLGIKLRYD 198
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 283 TNITRSSMSFGDSMRSR-HTLKTPPLHHSLKTSI 381
+N+ + +G+ + H+ PP+HH ++ I
Sbjct: 72 SNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPI 105
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 283 TNITRSSMSFGDSMRSR-HTLKTPPLHHSLKTSI 381
+N+ + +G+ + H+ PP+HH ++ I
Sbjct: 72 SNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPI 105
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 687 LQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKY 589
++ ++ H IK+I EEY ++K KY
Sbjct: 138 IKTLNGHEIKFIRKEEYISFESKVFHKLKKMKY 170
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 283 TNITRSSMSFGDSMRSR-HTLKTPPLHHSLKTSI 381
+N+ + +G+ + H+ PP+HH ++ I
Sbjct: 72 SNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPI 105
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 283 TNITRSSMSFGDSMRSR-HTLKTPPLHHSLKTSI 381
+N+ + +G+ + H+ PP+HH ++ I
Sbjct: 72 SNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRPPI 105
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 693 TLLQVVDNHVIKYIPPEEYKPMIKSNVKW 607
T + V N Y+PP +K K ++ W
Sbjct: 106 TNVVVKHNGSCLYVPPGIFKSTCKMDITW 134
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,097
Number of Sequences: 336
Number of extensions: 4885
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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