Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o02r
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA... 193 7e-49
CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein. 193 7e-49
BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal... 193 7e-49
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 36 0.21
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 36 0.21
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 36 0.21
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 34 0.63
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 34 0.63
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 34 0.63
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 34 0.63
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 34 0.63
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.63
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.63
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.63
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.63
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 34 0.63
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 34 0.63
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 34 0.63
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 34 0.63
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 33 0.83
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 33 0.83
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 33 0.83
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 33 0.83
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 33 0.83
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 33 0.83
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 33 0.83
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 33 0.83
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 33 0.83
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 33 0.83
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 32 2.5
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 32 2.5
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 32 2.5
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 32 2.5
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 32 2.5
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 31 3.3
BC021553-1|AAH21553.1| 281|Homo sapiens C1q and tumor necrosis ... 31 3.3
AY358424-1|AAQ88790.1| 281|Homo sapiens C1QTNF1 protein. 31 3.3
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 31 3.3
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 31 3.3
AK172767-1|BAD18750.1| 291|Homo sapiens protein ( Homo sapiens ... 31 3.3
AJ272138-1|CAC20425.1| 379|Homo sapiens G protein coupled recep... 31 3.3
AF329840-1|AAK17964.1| 281|Homo sapiens complement-c1q tumor ne... 31 3.3
AF232905-1|AAG44303.1| 379|Homo sapiens putative GPCR interacti... 31 3.3
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 31 3.3
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 31 3.3
Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 31 5.8
Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 31 5.8
M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary... 31 5.8
M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 31 5.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 31 5.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 31 5.8
BC014239-1|AAH14239.1| 756|Homo sapiens PTPRC protein protein. 31 5.8
AY539691-1|AAS46946.1| 72|Homo sapiens CD45 protein. 31 5.8
AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 31 5.8
AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 31 5.8
AL355988-1|CAI19377.1| 753|Homo sapiens protein tyrosine phosph... 31 5.8
AL157402-10|CAI15647.1| 148|Homo sapiens protein tyrosine phosp... 31 5.8
AL157402-9|CAI15646.1| 235|Homo sapiens protein tyrosine phosph... 31 5.8
AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 31 5.8
AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 31 5.8
AL157402-2|CAI15639.1| 753|Homo sapiens protein tyrosine phosph... 31 5.8
AK075175-1|BAC11451.1| 199|Homo sapiens protein ( Homo sapiens ... 31 5.8
AK055541-1|BAB70947.1| 199|Homo sapiens protein ( Homo sapiens ... 31 5.8
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 31 5.8
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 30 7.7
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 30 7.7
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 30 7.7
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein. 30 7.7
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 30 7.7
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 30 7.7
BC103965-1|AAI03966.1| 172|Homo sapiens keratin associated prot... 30 7.7
BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alph... 30 7.7
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 30 7.7
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 30 7.7
AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha ... 30 7.7
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 30 7.7
AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha ... 30 7.7
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 30 7.7
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 30 7.7
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 30 7.7
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 30 7.7
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 30 7.7
AB096940-1|BAE46355.1| 172|Homo sapiens keratin associated prot... 30 7.7
>X06323-1|CAA29639.1| 348|Homo sapiens protein ( Human MRL3 mRNA
for ribosomal protein L3 homologue ( MRL3 = mammalian
ribosome L3 ). ).
Length = 348
Score = 193 bits (470), Expect = 7e-49
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 1/232 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G PLW KDG+K TLLQV D HV+KY E K + VG
Sbjct: 101 ALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSVG 148
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+ + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D+ +
Sbjct: 149 GKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTA 208
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +RT
Sbjct: 209 KTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRT 267
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAP-PFPT 58
G+K+ RI+TK+N+I+ G ++PG + + D+ LP ++ PFPT
Sbjct: 268 EYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPT 318
>CR456720-1|CAG33001.1| 348|Homo sapiens MRPL3 protein.
Length = 348
Score = 193 bits (470), Expect = 7e-49
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 1/232 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G PLW KDG+K TLLQV D HV+KY E K + VG
Sbjct: 101 ALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSVG 148
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+ + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D+ +
Sbjct: 149 GKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTA 208
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +RT
Sbjct: 209 KTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRT 267
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAP-PFPT 58
G+K+ RI+TK+N+I+ G ++PG + + D+ LP ++ PFPT
Sbjct: 268 EYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPT 318
>BC003375-1|AAH03375.1| 348|Homo sapiens mitochondrial ribosomal
protein L3 protein.
Length = 348
Score = 193 bits (470), Expect = 7e-49
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 1/232 (0%)
Frame = -2
Query: 750 ARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEEYKPMIKSNVKWVEKQKYGCILVG 571
A K+G PLW KDG+K TLLQV D HV+KY E K + VG
Sbjct: 101 ALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG------------KMATLSVG 148
Query: 570 AENIDPSVVTKDYCGIFDSVGMLPKRHLCRFVVSPESALPNGTPLYATHFRVGDCIDIRS 391
+ + + +G+ PK+ + F ++ +A+ GTPLYA HFR G +D+ +
Sbjct: 149 GKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTA 208
Query: 390 KTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNRWRT 211
KT+ +GFQGVMKRWGFKG PA+HG TKTHRRPG + + G+ RVWPGTKMPG MGN +RT
Sbjct: 209 KTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRT 267
Query: 210 LRGVKILRIDTKYNVIWTLGVAIPGETGAMCYLFDTVLPLKRNKTAP-PFPT 58
G+K+ RI+TK+N+I+ G ++PG + + D+ LP ++ PFPT
Sbjct: 268 EYGLKVWRINTKHNIIYVNG-SVPGHKNCLVKVKDSKLPAYKDLGKNLPFPT 318
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 35.5 bits (78), Expect = 0.21
Identities = 29/94 (30%), Positives = 41/94 (43%)
Frame = -2
Query: 465 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 286
++ L P+++ F + ID+ + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 184
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 35.5 bits (78), Expect = 0.21
Identities = 29/94 (30%), Positives = 41/94 (43%)
Frame = -2
Query: 465 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 286
++ L P+++ F + ID+ + T RG +GV RW K +P K R+ I
Sbjct: 198 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 254
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 184
G+ ARV G G RT KI RI
Sbjct: 255 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 35.5 bits (78), Expect = 0.21
Identities = 29/94 (30%), Positives = 41/94 (43%)
Frame = -2
Query: 465 ESALPNGTPLYATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNI 286
++ L P+++ F + ID+ + T RG +GV RW K +P K R+ I
Sbjct: 197 QARLEKQVPVHSV-FSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK--THKGLRKVACI 253
Query: 285 GSGGEKARVWPGTKMPGHMGNRWRTLRGVKILRI 184
G+ ARV G G RT KI RI
Sbjct: 254 GA-WHPARVGCSIARAGQKGYHHRTELNKKIFRI 286
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 758 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 805
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 763 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 810
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
++G QG+ GF G G+ H +PG +G GE+ PGT PG +G
Sbjct: 762 EQGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGS--PGT--PGQVG 809
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 206 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 260
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 261 VARAGQKGYHHRTEINKKIYKIGQGY 286
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 59 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 113
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 114 VARAGQKGYHHRTEINKKIYKIGQGY 139
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 182 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 236
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 237 VARAGQKGYHHRTEINKKIYKIGQGY 262
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 100 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 154
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 155 VARAGQKGYHHRTEINKKIYKIGQGY 180
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 156 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 210
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 211 VARAGQKGYHHRTEINKKIYKIGQGY 236
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.83
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -2
Query: 423 FRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGG--EKARVWPG 250
F + ID+ T +G++GV RW K +P KTHR + G ARV
Sbjct: 211 FGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLRKVACIGAWHPARVAFS 265
Query: 249 TKMPGHMGNRWRTLRGVKILRIDTKY 172
G G RT KI +I Y
Sbjct: 266 VARAGQKGYHHRTEINKKIYKIGQGY 291
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 371 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 425
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 31.9 bits (69), Expect = 2.5
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 396 RSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
R + G GV G +GMP S G + +PG GS GE R P PG G R
Sbjct: 518 RGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGP----PGPSGPR 572
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 378 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 274 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 320
>BC021553-1|AAH21553.1| 281|Homo sapiens C1q and tumor necrosis
factor related protein 1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 80 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 140 RCKSHYAAFSVGRKKPMHSNHYYQTV 165
>AY358424-1|AAQ88790.1| 281|Homo sapiens C1QTNF1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 80 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 140 RCKSHYAAFSVGRKKPMHSNHYYQTV 165
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGT-KMPGHMGN 223
IR + D G G G KG P HG+ PG G G + PGT PG +G
Sbjct: 311 IRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGD--PGTVGPPGPVGE 368
Query: 222 R 220
R
Sbjct: 369 R 369
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 378 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 288 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 334
>AK172767-1|BAD18750.1| 291|Homo sapiens protein ( Homo sapiens
cDNA FLJ23928 fis, clone COL05592, highly similar to
Homo sapiens C1q and tumor necrosis factor related
protein 1 (C1QTNF1). ).
Length = 291
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 90 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 149
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 150 RCKSHYAAFSVGRKKPMHSNHYYQTV 175
>AJ272138-1|CAC20425.1| 379|Homo sapiens G protein coupled receptor
interacting protein protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 178 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 237
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 238 RCKSHYAAFSVGRKKPMHSNHYYQTV 263
>AF329840-1|AAK17964.1| 281|Homo sapiens complement-c1q tumor
necrosis factor-related protein protein.
Length = 281
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 80 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 140 RCKSHYAAFSVGRKKPMHSNHYYQTV 165
>AF232905-1|AAG44303.1| 379|Homo sapiens putative GPCR interacting
protein GIP protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.3
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = -2
Query: 447 GTPLY-ATHFRVGDCIDIRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGE 271
GT +Y AT + ++ + DRG +G+ ++G G + G T + G++G+ GE
Sbjct: 178 GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 237
Query: 270 K-----ARVWPGTKMPGHMGNRWRTL 208
+ A G K P H + ++T+
Sbjct: 238 RCKSHYAAFSVGRKKPMHSNHYYQTV 263
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 378 RGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMG 226
RG QG+ G G P +G T PG GS G+ + PG+ PGH G
Sbjct: 288 RGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQ--PGS--PGHQG 334
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGT-KMPGHMGN 223
IR + D G G G KG P HG+ PG G G + PGT PG +G
Sbjct: 466 IRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGD--PGTVGPPGPVGE 523
Query: 222 R 220
R
Sbjct: 524 R 524
>Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for
leukocyte common antigen (T200). ).
Length = 1304
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 255 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 290
>Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for
T200 leukocyte common antigen (CD45, LC-A). ).
Length = 1143
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 94 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 129
>M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary
surfactant apoprotein (PSAP) gene, complete cds. ).
Length = 248
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGN 223
G G P SHG+ H R G G G + P +MP GN
Sbjct: 31 GIPGTPGSHGLPGRHGRDGLKGDLGPPGPMGPPGEMPCPPGN 72
>M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common
antigen precursor protein.
Length = 1114
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 65 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 100
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
+R ++G QG G G P S G PG G G PG + G G+R
Sbjct: 1665 VRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDR 1724
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
+R ++G QG G G P S G PG G G PG + G G+R
Sbjct: 1665 VRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDR 1724
>BC014239-1|AAH14239.1| 756|Homo sapiens PTPRC protein protein.
Length = 756
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 207 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 242
>AY539691-1|AAS46946.1| 72|Homo sapiens CD45 protein.
Length = 72
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 28 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 63
>AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 257 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 292
>AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 96 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 131
>AL355988-1|CAI19377.1| 753|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 753
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 209 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 244
>AL157402-10|CAI15647.1| 148|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 148
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 96 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 131
>AL157402-9|CAI15646.1| 235|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 235
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 191 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 226
>AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 257 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 292
>AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 96 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 131
>AL157402-2|CAI15639.1| 753|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 753
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 148 NTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPN 261
N +C NN C N E N T+C + +S + C+ P+
Sbjct: 209 NVECGNNT--CTNNEVHNLTECKNASVSISHNSCTAPD 244
>AK075175-1|BAC11451.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ90694 fis, clone PLACE1006716, highly similar to
Complement-c1q tumor necrosis factor-related protein 1
precursor. ).
Length = 199
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK-----ARVWPGTKMPG 235
++ + DRG +G+ ++G G + G T + G++G+ GE+ A G K P
Sbjct: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPM 74
Query: 234 HMGNRWRTL 208
H + ++T+
Sbjct: 75 HSNHYYQTV 83
>AK055541-1|BAB70947.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ30979 fis, clone HHDPC2000115, highly similar to
Mus musculus putative secreted protein ZSIG37 (Zsig37)
mRNA. ).
Length = 199
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEK-----ARVWPGTKMPG 235
++ + DRG +G+ ++G G + G T + G++G+ GE+ A G K P
Sbjct: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPM 74
Query: 234 HMGNRWRTL 208
H + ++T+
Sbjct: 75 HSNHYYQTV 83
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -2
Query: 399 IRSKTMDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
+R ++G QG G G P S G PG G G PG + G G+R
Sbjct: 304 VRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDR 363
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 367 LKTSIHSFRSNVNTIPNSKMSRI*WSAIW*SRFW*YNKSAEVPFWQHSNTVK 522
L + V+T+ K+S + W ++F + K A+ F QH NTVK
Sbjct: 1410 LLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVK 1461
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 317 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 364
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 367 LKTSIHSFRSNVNTIPNSKMSRI*WSAIW*SRFW*YNKSAEVPFWQHSNTVK 522
L + V+T+ K+S + W ++F + K A+ F QH NTVK
Sbjct: 1410 LLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVK 1461
>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
Length = 2083
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 367 LKTSIHSFRSNVNTIPNSKMSRI*WSAIW*SRFW*YNKSAEVPFWQHSNTVK 522
L + V+T+ K+S + W ++F + K A+ F QH NTVK
Sbjct: 1265 LLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVK 1316
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 599 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 651
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 483 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 535
>BC103965-1|AAI03966.1| 172|Homo sapiens keratin associated protein
13-3 protein.
Length = 172
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 145 CNTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSC 267
C + P+N+++ + + +T Q S+ + C RPNSC
Sbjct: 26 CGSSYPSNLVYSTDLCSPSTCQLGSSLYRGCQETCWRPNSC 66
>BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alpha 1
protein.
Length = 678
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 74 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 121
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 599 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 651
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 317 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 364
>AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 74 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 121
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 317 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 364
>AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 74 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 121
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 560 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 612
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 611 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 663
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -2
Query: 381 DRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKARVWPGTKMPGHMGNR 220
DRGF G+ G KG G PG+ G GE + P +PG G R
Sbjct: 599 DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGP-RGLPGEAGPR 651
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 74 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 121
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = -2
Query: 348 GFKGMPASHGVTKTHRRPGNIGSGGEK-------ARVWPGTKMPGHMG 226
G G P + G+T PG+IGS G+K +R +PG +PG G
Sbjct: 317 GKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPG 364
>AB096940-1|BAE46355.1| 172|Homo sapiens keratin associated protein
protein.
Length = 172
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 145 CNTQCPNNIIFCINTENLNTTQCSPSVTHVSRHFCSRPNSC 267
C + P+N+++ + + +T Q S+ + C RPNSC
Sbjct: 26 CGSSYPSNLVYSTDLCSPSTCQLGSSLYRGCQETCWRPNSC 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,889,433
Number of Sequences: 237096
Number of extensions: 2864214
Number of successful extensions: 8033
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 5831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7878
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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