Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o01r
(757 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 34 0.001
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 27 0.16
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 23 2.0
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.0
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.0
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 23 2.0
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.0
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 8.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 8.0
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 34.3 bits (75), Expect = 0.001
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = -1
Query: 745 LKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRN 566
L++L+ NP+ L++ S +G +N +E +N L ++ G F ++ L+ L + RN
Sbjct: 515 LRHLSLEGNPITTLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRN 574
Query: 565 LR 560
++
Sbjct: 575 IK 576
Score = 30.3 bits (65), Expect = 0.017
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -1
Query: 640 LDEVKRGTFTPLKSLKVLHLCHNRNLRY-ISHNAFRGLKDKWTLKEVYLDDNNLSEL 473
L ++ GTF + L L+L HN L I+ +F+GL ++TL + LD+ +LS++
Sbjct: 406 LGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGL--EYTLLHLNLDNVSLSQV 460
Score = 29.9 bits (64), Expect = 0.023
Identities = 27/89 (30%), Positives = 43/89 (48%)
Frame = -1
Query: 748 TLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNR 569
TLK ++ V D+ L+ + EL++ N+ L V +F L+SLK +HL N
Sbjct: 19 TLKLTHALSSSVQNFPSDAIKILNRLEELDLS-NNRLRNVPDNSFHFLRSLKKVHLQDN- 76
Query: 568 NLRYISHNAFRGLKDKWTLKEVYLDDNNL 482
+ I F+G + L EVY N++
Sbjct: 77 TIEMIHRGTFQGDIHR-DLTEVYFSFNSV 104
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 436 LGMTGNSWLCNCDL 395
L + G W C+CDL
Sbjct: 701 LKLMGGKWSCDCDL 714
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 209 CSMDNPCRCNGSCVWHDLGTSC*C 138
CS NPCR NGSCV C C
Sbjct: 110 CS-PNPCRNNGSCVDRIADFECNC 132
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 23.4 bits (48), Expect = 2.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 517 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 380
TL + Y +L LS L+P S + L + S LCN N N
Sbjct: 176 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 221
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 2.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 517 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 380
TL + Y +L LS L+P S + L + S LCN N N
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 381
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 2.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 517 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 380
TL + Y +L LS L+P S + L + S LCN N N
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 381
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 23.4 bits (48), Expect = 2.0
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -2
Query: 426 LVIAGCVIVIWSTLLINRVLVISSSLMKSLIVLLL*D*VENTLQILLSTFVQC*TRHFHL 247
LV+A ++W+ +I VL + + LIV +L T I +V C +F++
Sbjct: 110 LVVANAFFLLWTPAVIFVVLSKNGIVFAGLIVFILFFAQGLTSPIFNLVYVYCCDNNFNV 169
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 403 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 498
NY A Y S H C++ Q+ +++ C L
Sbjct: 137 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 168
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 403 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 498
NY A Y S H C++ Q+ +++ C L
Sbjct: 138 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 169
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 403 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 498
NY A Y S H C++ Q+ +++ C L
Sbjct: 138 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,394
Number of Sequences: 336
Number of extensions: 3932
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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