Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o01r
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 46 3e-05
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 44 1e-04
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 44 1e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 40 0.002
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 40 0.003
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 39 0.004
SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39) 36 0.036
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 35 0.062
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06) 31 0.76
SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 31 1.0
SB_24472| Best HMM Match : I-set (HMM E-Value=0) 31 1.3
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 29 3.1
SB_9976| Best HMM Match : PIP5K (HMM E-Value=2) 29 3.1
SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 29 4.1
SB_786| Best HMM Match : EGF (HMM E-Value=0) 29 4.1
SB_27209| Best HMM Match : LRR_1 (HMM E-Value=0.0048) 29 5.4
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 29 5.4
SB_41271| Best HMM Match : EGF (HMM E-Value=1.2e-20) 29 5.4
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16) 28 7.1
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -1
Query: 745 LKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRN 566
LK L N + ++ F GL ++ +L++ ND L + RG F PLKSL+ L L NRN
Sbjct: 119 LKQLNLGENKIRTVSASMFKGLVSLEKLDLRFND-LKALPRGVFKPLKSLRELFLHDNRN 177
Query: 565 L-RYISHNAFRGL 530
+ I AF GL
Sbjct: 178 MGSRIEEGAFNGL 190
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = -1
Query: 745 LKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRN 566
LK+L +NN + ++ D +F L + +L +GEN + V F L SL+ L L N +
Sbjct: 95 LKWLDLSNNDISDIQDGTFENLRYLKQLNLGENK-IRTVSASMFKGLVSLEKLDLRFN-D 152
Query: 565 LRYISHNAFRGLKDKWTLKEVYLDDN 488
L+ + F+ LK +L+E++L DN
Sbjct: 153 LKALPRGVFKPLK---SLRELFLHDN 175
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -1
Query: 601 SLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMTG 422
++ VL L H+ NL +SH+ F+ + K L+EVYLD N L +L L L VLG++
Sbjct: 56 NMSVLELRHS-NLTTVSHDLFKSKEGK-ALEEVYLDANQLRDLPRGLFNLQNLQVLGLSD 113
Query: 421 NS-WLCNCDLVNIVN 380
N + L N+VN
Sbjct: 114 NELTILPSVLSNLVN 128
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/111 (34%), Positives = 54/111 (48%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHN 572
S L+ L N + +L DD GL+++ EL + END L E+ +FT +K+LKVL L N
Sbjct: 109 SKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDEND-LSELS-VSFTLMKNLKVLELGDN 166
Query: 571 RNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGN 419
R F L+ L+ V L NN+ +L L +TGN
Sbjct: 167 HIERL--PEDFGNLR---KLEVVNLSQNNIEKLPESFGFLCCLKSFDITGN 212
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 559 YISHNAFRGLKDKWT----LKEVYLDDNNLSELSPDLMPWSKLDVLGMTGN 419
Y++ N L D + L E++L++N+L EL L SKL VL +TGN
Sbjct: 69 YLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGN 119
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/95 (32%), Positives = 53/95 (55%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHN 572
++L+ L + N + L +D+F GLS++ +L + N L + TF L +L+ L L HN
Sbjct: 116 ASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFN-RLRAIPETTFHGLAALQRLRL-HN 173
Query: 571 RNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSP 467
NL+ S R L+ +LK + L++N L+ + P
Sbjct: 174 NNLKTFSE---RTLQGTLSLKSLQLNNNLLTRIEP 205
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHN 572
S+L+ L + N + + + +F GL+ + L + N+ L T SLK L L +N
Sbjct: 140 SSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNN-LKTFSERTLQGTLSLKSLQL-NN 197
Query: 571 RNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDL 461
L I FR L+ L+ +YL++NN++EL L
Sbjct: 198 NLLTRIEPGTFRNLRG---LEILYLNNNNITELDQRL 231
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHN 572
STL L + N + L SF G + L V EN++++ ++ GTF L L+L +N
Sbjct: 60 STLGKLRASYNRITNLTRSSFAGYPYLKWLSV-ENNFMEVIENGTFLRQALLDELYLGYN 118
Query: 571 RNLRYISHNAFRGLKDKWTLKEVYLDDNNLSEL 473
+ L I+ GL+D L+ + L N ++ L
Sbjct: 119 K-LERITRGTLEGLRD---LQRLRLSKNTITRL 147
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = -1
Query: 736 LTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRNLRY 557
L N+N + L D F+GL+N+ L + N + E++ G F L +L+ L+L NR
Sbjct: 116 LLLNDNRLSLLRYDFFLGLNNIRTLNLRRNG-IKEIEFGAFRNLTALESLYLFRNRFFG- 173
Query: 556 ISHNAFRGLKDKWTLKEVYLDDNNLSELS 470
I NAF L L+ + L DN L+ L+
Sbjct: 174 IGPNAFERLT---ALQVLSLVDNRLTGLT 199
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Frame = -1
Query: 754 GSTLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLK--SLKVLHL 581
GS+++ L + N + L +D+F GLS+ ++ + N + + PL +L VL L
Sbjct: 591 GSSIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNNKLI----QSPLIPLAHLNLVVLDL 646
Query: 580 CHNR--NLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSK-LDVLGMTGNS 416
N+ + N F GL+D ++L +NN++EL DL ++ L L + N+
Sbjct: 647 QFNQIPTINVGELNVFTGLRD------LFLQNNNITELGKDLFKYNTVLGTLNIDNNA 698
>SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39)
Length = 587
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = -1
Query: 757 VGSTLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLC 578
+GS + T N + E+ND++F G+ ++ L++ EN ++ G ++ ++ L+L
Sbjct: 4 IGSCCCHSTLEGNRITEVNDNTFKGVKSLETLDLSENLFVRLPSAG----MQQIRRLYLR 59
Query: 577 HNRNLRYIS 551
NR+L+ +S
Sbjct: 60 GNRHLKELS 68
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 35.5 bits (78), Expect = 0.047
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHN 572
S+L+ L + N + + +F G + + +L + E + L ++ TF L +LKVL+L +N
Sbjct: 109 SSLEVLKLSKNRISTIRG-AFWGQNKLQQLNL-ERNRLSHIQDTTFKHLLALKVLNLANN 166
Query: 571 RNLRYISHNAFRGLKDKWTLKEVYLDDNNLS 479
R + +IS +F L+ +L+ + L +N++S
Sbjct: 167 R-IYHISQGSFSDLR---SLEGLDLSNNDIS 193
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 35.1 bits (77), Expect = 0.062
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = -1
Query: 736 LTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRNLRY 557
L ++N + + + F G SNV L + +ND L+E+ + + LKSL L+L +N+ LR
Sbjct: 31 LDLSSNQLKIIPEFVFRGFSNVKNLTLADND-LEEIGNASLSGLKSLLYLNLANNK-LRK 88
Query: 556 ISHNAFRGLKDKWTLK---EVYLDDNNLSEL 473
+ N + T+ +L NN+ EL
Sbjct: 89 WNGNLSVNTPELETINVTGNYWLPSNNVLEL 119
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 742 KYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRNL 563
K+L N V ND F N++ + YLDE + + LK LK +H+C N N+
Sbjct: 3334 KFLMLGWNIVYGFNDSDFEVSENLLSI------YLDEYEETPWDALKYLKNVHVCEN-NV 3386
Query: 562 RYISHN 545
+N
Sbjct: 3387 NVCKNN 3392
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -1
Query: 592 VLHLCHNRNLRYISHNAFRGLK----DKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMT 425
+ LC+ R+L +S N R L D TL+E+ L +N L L +L +L LG++
Sbjct: 70 ISRLCNLRHLD-VSSNKLRSLPAEMGDLVTLRELLLSNNGLRVLPNELGKLFQLQTLGLS 128
Query: 424 GN 419
GN
Sbjct: 129 GN 130
>SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)
Length = 335
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 215 KTCSMDNPCRCNGSCVWHDLGTSC*C 138
KT +N C+ NG+C W+D C C
Sbjct: 29 KTLCEENGCQNNGTCFWNDTDYGCMC 54
>SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Frame = -1
Query: 568 NLRYISHNAFRGLKDK----WTLKEVYLDDNNLSELSPDLMPWSK-------LDVLGMTG 422
N R +S NA R + + LK + L N ++ ++ + P + + + + G
Sbjct: 9 NFRNLSRNALRSISSRAFSRHALKWIDLSHNKMTAINREAFPSDQQLKQSAAIGGVYLHG 68
Query: 421 NSWLCNCDLVNIVNKQGAGDKFKSDEVPYCAAPMRLSGEYITNI 290
N W C C+L +V+ G + CA P L G+ + +
Sbjct: 69 NPWDCTCNLQWLVDALQTGMLKSLGKSAECATPELLRGKALMEL 112
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -1
Query: 712 VELNDDSFVGLSNVIELEVGE----NDYLDEVKRGTFTPLKSLKVLHLCHNRNLRYISHN 545
+E + +F L N I +E E + + F L +L+++ L N ++ IS N
Sbjct: 111 IECSRANFTVLPNDIPVETTELYFSRTQISNLVENAFQQLPNLEIMRLPEN-GIKRISVN 169
Query: 544 AFRGLKDKWTL 512
AF+GLK TL
Sbjct: 170 AFKGLKSLTTL 180
>SB_24472| Best HMM Match : I-set (HMM E-Value=0)
Length = 473
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 490 NNLSELSP-DLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQGAGDKFKSDEVPYCAAPMRL 314
NN+SE+ DL L L + N +CNCDL+ + ++ C P L
Sbjct: 25 NNISEVKRGDLAGLHYLTTLRLDSNELVCNCDLLWLSKLLRRTP--NTETAATCHEPAEL 82
Query: 313 SGEYITNIT 287
SG I +T
Sbjct: 83 SGRAIVRLT 91
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 526 DKWT-LKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQGAGDKFKS 350
DK T LK+VY DN++S++ +L ++L VL + N+ DL N+V+
Sbjct: 57 DKCTNLKKVYFYDNHISKIE-NLSSLTRLTVLWLNNNNIQAIEDLTNLVHLPHLKSLSLK 115
Query: 349 DEVPYCAAPMRLSGEYITNI 290
D Y P+ L Y T++
Sbjct: 116 DPT-YGPNPVSLLCNYATHL 134
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -1
Query: 604 KSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMT 425
+S +C R I + A + + L EVYL DN L E++ L + L+VL +
Sbjct: 138 RSYTACKICRKSWKRMICY-ALGCFQSNFYLTEVYLQDNMLIEVNGLLRHLTCLEVLMLN 196
Query: 424 GNSWLCNCDLVN 389
GN D+V+
Sbjct: 197 GNQLTKLTDVVH 208
>SB_9976| Best HMM Match : PIP5K (HMM E-Value=2)
Length = 673
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 375 CLLTMLTRSQLHSQLLPVIPRTSSLLHGIRSGDNSLKLLSSRY 503
CLL + +H Q++ + P L I +GD+ K SR+
Sbjct: 563 CLLAKVESLPIHDQIVTITPEEDIKLSRIANGDDQTKQQKSRF 605
>SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2061
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 375 CLLTMLTRSQLHSQLLPVIPRTSSLLHGIRSGDNSLKLLSSRY 503
CLL + +H Q++ + P L I +GD+ K SR+
Sbjct: 1473 CLLAKVESLPIHDQIVTITPEEDIKLSRIANGDDQTKQQKSRF 1515
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDY 641
+ L L +NN ++ +++++F GL+++ L + ND+
Sbjct: 47 TNLVTLILSNNEIIAIDENAFQGLTSLRNLSLSHNDF 83
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 209 CSMDNPCRCNGSCVWHDLGTSC*CNQE 129
CS NPC+ NG CV +G C C ++
Sbjct: 201 CS-PNPCKNNGVCVSRGVGYHCKCKRD 226
>SB_27209| Best HMM Match : LRR_1 (HMM E-Value=0.0048)
Length = 453
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = -1
Query: 745 LKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKR----GTFTPLKSLKVLHLC 578
+K L+ +NNP++ ++ +G + I+ N Y++++ T KSL L+LC
Sbjct: 109 IKALSLDNNPLILQRYNALLGEESTIQHLSLRNCYVNDMGAKMIGDALTVNKSLTTLNLC 168
Query: 577 HNR 569
+N+
Sbjct: 169 YNK 171
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 28.7 bits (61), Expect = 5.4
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = -1
Query: 751 STLKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLD-EVKRGTFTPLKSLKVLHLCH 575
S L L ++N + + +D + L ++ L++ ND K G + LKSL VL+
Sbjct: 127 SGLTVLDLHDNLLTSIPEDIII-LRDLERLDLTNNDISGLPYKIGNMSNLKSL-VLNGNP 184
Query: 574 NRNLR----YISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGN 419
R LR I+ GL L+ + L +NN+S++ P+L L L + GN
Sbjct: 185 LRELRRDIVMIAVIDVDGLLRMSVLETLDLQNNNISQVPPELGNVRGLKALQLGGN 240
>SB_41271| Best HMM Match : EGF (HMM E-Value=1.2e-20)
Length = 169
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 197 NPCRCNGSCVWHDLGTSC*CNQE 129
NPCR GSC D G C C E
Sbjct: 8 NPCRNGGSCTEVDDGFECACQAE 30
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = -1
Query: 682 LSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 503
L N+ +L++ N + V R T L +L++L +C S + G+ +L E+
Sbjct: 732 LPNLNKLKLS-NSIISTV-RDLGTCLTNLRMLWMCR------CSLSDLDGISSLSSLAEL 783
Query: 502 YLDDNNLSELSPDLMPWSKLDVLGMTGN 419
YL N++S++SP M L VL + GN
Sbjct: 784 YLAFNDISDVSPVSM-LDNLQVLDLEGN 810
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 28.3 bits (60), Expect = 7.1
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Frame = -1
Query: 745 LKYLTFNNNPVVELNDDSFVGLSNVIELEVGENDYLDEVKRGTFTPLKSLKVLHLCHNR- 569
L++L NN + L S ++ + L + N+ ++ T L+ L+VL L N
Sbjct: 146 LRWLNLQNNQITNL-PSSLADMNGLCYLNLEANEL--KIVPEVVTKLEKLQVLILSDNEI 202
Query: 568 NLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPW-SKLDVLGMTGNS 416
NA L+ E+YLDDN L L L + + L +L + N+
Sbjct: 203 GALPADLNALENLR------ELYLDDNRLMSLPKKLHEFLTGLYILDINNNA 248
>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3610
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 221 EAKTCSMDNPCRCNGSCVWHDL 156
E K CS NPC NG C HD+
Sbjct: 2674 EPKNCSSSNPCLNNGIC--HDI 2693
>SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16)
Length = 454
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -1
Query: 172 AFGMILGLLVNAIKKVYKTRFQSQPIHYININSDS 68
A GM L +LVN V K S+ H+IN++SDS
Sbjct: 404 ADGMCLSVLVN----VKKCNLVSEKFHWINVSSDS 434
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 11/40 (27%)
Frame = -3
Query: 212 TCSMDNPCR-----CNGSCV------WHDLGTSC*CNQES 126
+CS DN C C G+C WH T CNQES
Sbjct: 20 SCSTDNECSAFEHCCKGNCTAKRIHCWHVCSTDHECNQES 59
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 194 PCRCNGSCVWHDLGTSC*C 138
PCR NGSCV G C C
Sbjct: 207 PCRNNGSCVLTQSGYQCLC 225
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 209 CSMDNPCRCNGSCVWHDLGTSC*C 138
CS NPCR G CV G SC C
Sbjct: 1646 CS-SNPCRSRGQCVDRLKGYSCNC 1668
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 194 PCRCNGSCVWHDLGTSC*C 138
PCR NGSCV G C C
Sbjct: 1020 PCRNNGSCVLTQSGYQCLC 1038
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,772,178
Number of Sequences: 59808
Number of extensions: 489427
Number of successful extensions: 1409
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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