Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o01f
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 44 1e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 37 0.015
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 35 0.061
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 33 0.14
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 33 0.19
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 32 0.32
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 31 0.57
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 31 0.99
SB_22518| Best HMM Match : DUF847 (HMM E-Value=1.10001e-40) 31 0.99
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 31 0.99
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 30 1.7
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 30 1.7
SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39) 29 2.3
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 29 4.0
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 29 4.0
SB_35875| Best HMM Match : RVT_1 (HMM E-Value=5.2e-24) 28 5.3
SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22) 28 5.3
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 28 5.3
SB_11265| Best HMM Match : LRR_1 (HMM E-Value=0.23) 28 5.3
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 28 7.0
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 27 9.2
SB_6204| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/88 (29%), Positives = 50/88 (56%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
+ +N + +I+D F N+ L L+L NKI + + + +F+G ++LE L+
Sbjct: 98 LDLSNNDISDIQDGTFENLRYLKQLNLGENKI--RTVSASMFKG--------LVSLEKLD 147
Query: 477 LGYNEIHSLDRYLFKYTPNLTRLYLNNN 560
L +N++ +L R +FK +L L+L++N
Sbjct: 148 LRFNDLKALPRGVFKPLKSLRELFLHDN 175
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 327 IEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLD 506
+++ +F++ L +LDLSNN IS +I G +E+ Y L+ LNLG N+I ++
Sbjct: 84 LKNTSFQDYQYLKWLDLSNNDIS------DIQDGTFENLRY----LKQLNLGENKIRTVS 133
Query: 507 RYLFKYTPNLTRLYLNNNPIEIL 575
+FK +L +L L N ++ L
Sbjct: 134 ASMFKGLVSLEKLDLRFNDLKAL 156
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 456 IALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPI 566
++LE L++ +NEI D P L L++NNN +
Sbjct: 215 MSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSL 251
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/146 (24%), Positives = 70/146 (47%)
Frame = +3
Query: 180 NWPEQINNISKDGHVLVTFFNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPR 359
N+P Q++ +S +++ T +N+ N+T L +++ +NR+ + FR++
Sbjct: 65 NFPMQVSLLSLYNNLISTIHSNAFRNLTALR-------SLNLGANRLSVLPRSVFRDLAS 117
Query: 360 LVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLT 539
L LDLS N++S L + F+G +L+ L L +N + ++ F L
Sbjct: 118 LRSLDLSANRLSS--LPEDTFEG--------LSSLQDLFLDFNRLRAIPETTFHGLAALQ 167
Query: 540 RLYLNNNPIEILDHVSILAISSATNL 617
RL L+NN ++ ++ S +L
Sbjct: 168 RLRLHNNNLKTFSERTLQGTLSLKSL 193
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/90 (28%), Positives = 43/90 (47%)
Frame = +3
Query: 294 AISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETL 473
++ +N + IE FRN+ L L L+NN I+ L +F R +L+ L
Sbjct: 192 SLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNIT--ELDQRLFT--------RTPSLKLL 241
Query: 474 NLGYNEIHSLDRYLFKYTPNLTRLYLNNNP 563
+ +N + +L R LF ++ L+NNP
Sbjct: 242 FVSFNSLATLPRGLFYSLSTDAKVSLHNNP 271
Score = 31.1 bits (67), Expect = 0.75
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
NR+ I + F + L L L NN + + QG ++L++L L N
Sbjct: 150 NRLRAIPETTFHGLAALQRLRLHNNNL--KTFSERTLQGT--------LSLKSLQLNNNL 199
Query: 492 IHSLDRYLFKYTPNLTRLYLNNNPIEILD 578
+ ++ F+ L LYLNNN I LD
Sbjct: 200 LTRIEPGTFRNLRGLEILYLNNNNITELD 228
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 37.5 bits (83), Expect = 0.009
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Frame = +3
Query: 228 VTFFNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISG--- 398
+ + ++ IT+I L + N + ++ SN + +IE +++ L +LDLS+N+IS
Sbjct: 17 ICWIDSQITSIKSLK-LHSNLVTLNLHSNHISKIE--GLQHLQNLRHLDLSSNQISHIEG 73
Query: 399 -------QVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLD--RYLFKYTPNLTRLYL 551
+VL + +G+ L L+L YN I ++ + L +LT LYL
Sbjct: 74 LTSLGYLRVLNLSCNRIYLVEGLENLRKLTKLDLSYNFIENVSGLKDLHGNGYSLTTLYL 133
Query: 552 NNNPIEILDH 581
+ N I L+H
Sbjct: 134 HGNRIASLEH 143
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 36.7 bits (81), Expect = 0.015
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIP------RLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREI 458
I F+ N + I ++AF+N+ L L L NNKI Q + S+IF G G
Sbjct: 540 IRFQYNSITSIAENAFQNVKVGQIGSGLATLHLQNNKI--QAITSKIF-GNSGSGS---- 592
Query: 459 ALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNN-----PIEILDHVSILAISSATN 614
++ L+L YNEI +L F + ++ L NN P+ L H++++ + N
Sbjct: 593 SIRILDLSYNEIRTLKEDAFAGLSSSYKVMLRNNKLIQSPLIPLAHLNLVVLDLQFN 649
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 240 NNSITNIT--QLSPIPGNR---IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKIS 395
NN I I+ L P NR + ++ +N + I +AF + L LDL +NK+S
Sbjct: 142 NNQIDRISYPNLEPFFQNRSQLVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKLS 198
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 462 LETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEIL 575
L L L N I L + LFKY L L ++NN I+++
Sbjct: 665 LRDLFLQNNNITELGKDLFKYNTVLGTLNIDNNAIQVV 702
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 36.3 bits (80), Expect = 0.020
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
++ +NR+ I +F ++ L LDLSNN IS V E GP+ G+ L +L
Sbjct: 161 LNLANNRIYHISQGSFSDLRSLEGLDLSNNDISWTV---EEMNGPFR-GLTN---LASLR 213
Query: 477 LGYNEIHSLDRYLFKYTPNLTRLYLNNNPI 566
L N I ++ F N+ L+LN + +
Sbjct: 214 LDGNRITAIAATAFLGLENIKYLWLNTSQL 243
Score = 32.7 bits (71), Expect = 0.25
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
++ + NR+ I+D F+++ L L+L+NN+I I QG + D R +LE L+
Sbjct: 137 LNLERNRLSHIQDTTFKHLLALKVLNLANNRI------YHISQGSFSD--LR--SLEGLD 186
Query: 477 LGYNEIHSLDRYL---FKYTPNLTRLYLNNNPIEILDHVSILAISS 605
L N+I + F+ NL L L+ N I + + L + +
Sbjct: 187 LSNNDISWTVEEMNGPFRGLTNLASLRLDGNRITAIAATAFLGLEN 232
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
+S + + +IE + + + + LDLSNNK+ L+ ++F +L LN
Sbjct: 30 LSLQGQGLSQIESEILQQLTAIEELDLSNNKLVKLQLQ-DVFLP----------SLTKLN 78
Query: 477 LGYNEIHSLDRYLFKYTPNLTRLYLNNNP-IEILDHVSILAI 599
L N++ +L+ F PNL L + NNP IE+ + ++A+
Sbjct: 79 LANNQLATLEG--FTAFPNLVDLNITNNPKIEVSEKYKLVAV 118
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 34.7 bits (76), Expect = 0.061
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 246 SITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQ 425
++T I P ++ S+ NR+ + +F P L +L + NN F
Sbjct: 50 TLTAIPTTFPSTLGKLRASY--NRITNLTRSSFAGYPYLKWLSVENN-----------FM 96
Query: 426 GPYEDGIY-REIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPI 566
E+G + R+ L+ L LGYN++ + R + +L RL L+ N I
Sbjct: 97 EVIENGTFLRQALLDELYLGYNKLERITRGTLEGLRDLQRLRLSKNTI 144
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/77 (40%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 339 AFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSL-DRYL 515
A ++ RL LDLS N I Q L+ G+ LETLNL YN I L D
Sbjct: 43 ALKSFTRLKNLDLSRNAI--QSLQ----------GVESLQLLETLNLYYNNISYLQDLSA 90
Query: 516 FKYTPNLTRLYLNNNPI 566
KY NL L L NP+
Sbjct: 91 LKYLTNLKELDLRLNPV 107
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 459 ALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILA 596
ALE L+L +NE+ ++D L + PNL L L N I L + LA
Sbjct: 88 ALELLDLSFNELSTIDPVLLDF-PNLKILCLQGNNISDLHEIDKLA 132
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 243 NSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKI 392
N I N++Q P G+ +S K N + I F N+ + +DLSNN+I
Sbjct: 271 NQIRNLSQY-PFTGHLQKLSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEI 319
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 459 ALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEIL 575
ALE+L+L +NE SLD P+LT+L L++N I+ +
Sbjct: 104 ALESLDLSFNEFESLDLQEVD-CPSLTQLDLSHNSIQFV 141
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 30.7 bits (66), Expect = 0.99
Identities = 27/80 (33%), Positives = 34/80 (42%)
Frame = +3
Query: 336 DAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYL 515
DAF+N L L++ N ISG I Y+ G LE L+L YN + D
Sbjct: 55 DAFKNFISLRELEMPLNNISG-----NIHLETYDFG-----HLEKLDLSYNRLTGADILA 104
Query: 516 FKYTPNLTRLYLNNNPIEIL 575
NL L+L N I L
Sbjct: 105 LGLMENLRTLHLTGNEIRRL 124
>SB_22518| Best HMM Match : DUF847 (HMM E-Value=1.10001e-40)
Length = 598
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 364 SIWISAIIKFQVKFS--GVRYSKDLTKMGSTVRLLWRHSILV 483
S+++ + F++ FS G YS LT G+T+ W H LV
Sbjct: 16 SVYMDSSANFRIDFSSGGSNYSSPLTSSGATILNNWTHVALV 57
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 291 IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNN 386
I +S +N++ I + F N+ L+YLDLS+N
Sbjct: 63 IVLSLSNNKISVIPNQLFINLIDLIYLDLSDN 94
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 438 DGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSI 590
+G+ R L+ LNL N + LD + + P L L L NN I L + +
Sbjct: 1088 EGLVRNPKLKWLNLSSNNLTILDTGMLERLPELRYLSLENNNITCLKGLQV 1138
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/93 (23%), Positives = 45/93 (48%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
+S + N + + + F+ +P+L +LDL+ NK + + + ++LE L+
Sbjct: 188 LSLRENHLSSLPSEFFK-LPKLAHLDLNMNKFE-----------EFPENLIGLVSLECLS 235
Query: 477 LGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEIL 575
L N I SL + P L ++ + +N + +L
Sbjct: 236 LRGNCIKSLADNCVEGLPKLCKVDIRDNQVTLL 268
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/101 (25%), Positives = 50/101 (49%)
Frame = +3
Query: 276 IPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYRE 455
IP + + ++ E++ +F ++ +L L L+NNKI S IF+G I
Sbjct: 45 IPRTVGTLIVEDGQITELKKTSFLDLTKLRGLYLTNNKI------SPIFEGT----ITTC 94
Query: 456 IALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILD 578
+ L T++L N + + ++ F +L + L+ N IE ++
Sbjct: 95 VRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIECVE 135
>SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39)
Length = 587
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 300 SFKSNRVIEIEDDAFRNIPRLVYLDLSNN 386
+ + NR+ E+ D+ F+ + L LDLS N
Sbjct: 12 TLEGNRITEVNDNTFKGVKSLETLDLSEN 40
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 390 ISGQVLRSEIFQGPYEDGIYREIALETLNLGYN----EIHSLDRYLFKYTPNLTRLYLNN 557
+SG L E + P I + L LNL +N E S + NLTRL LN+
Sbjct: 285 LSGNSLTDEAIE-PLMSSILLKCRLAELNLSHNILCDEFASSMGQVLLTNRNLTRLLLNS 343
Query: 558 NPIEI 572
N +E+
Sbjct: 344 NHLEV 348
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISG 398
N++ ++ DD F+N+ LD+ NK++G
Sbjct: 179 NQIKKVADDVFQNVSNGFKLDIGRNKMNG 207
>SB_35875| Best HMM Match : RVT_1 (HMM E-Value=5.2e-24)
Length = 1423
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 270 SPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYL 371
SP+P A+ +SNR+ +I + ++P LV++
Sbjct: 683 SPLPKQSAALMLQSNRISQIGEYDITSLPHLVHI 716
>SB_10898| Best HMM Match : Galactosyl_T (HMM E-Value=1.9e-22)
Length = 301
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 294 AISFKSNRVIEIEDDAFRNIPRLV 365
A+ FK +++++DD + +IPR V
Sbjct: 171 ALQFKPKYILKVDDDVYAHIPRFV 194
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 462 LETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNL 617
L ++L N +H L L P L L ++NN + L VS L+ S L
Sbjct: 344 LVRIDLANNSLHELPEELLNTLPLLEELDVSNNNLVSLPEVSNLSFMSLEKL 395
>SB_11265| Best HMM Match : LRR_1 (HMM E-Value=0.23)
Length = 174
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 NSITNITQLSPIPGNRIAISFK--SNRVIEIEDDAFRNIPRLVYLDLSNNKIS 395
N+ITN+T + + G + IS + NR+ IE AF L L L NKI+
Sbjct: 49 NAITNVTA-ADMKGKEMLISLQLNDNRISYIETGAFNACIELRSLLLGQNKIT 100
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 27.9 bits (59), Expect = 7.0
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLN 476
++ + N + EIE AFRN+ L L L N+ G GP + R AL+ L+
Sbjct: 140 LNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFG--------IGP--NAFERLTALQVLS 189
Query: 477 LGYNEIHSLDRYLF 518
L N + L R +F
Sbjct: 190 LVDNRLTGLTRSMF 203
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 450 REIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATN 614
R ++ E + Y+E S + L PN+TRLY +E D + ++A+SS N
Sbjct: 625 RTLSDEFKHHNYDETLSFLKELHGQFPNITRLYSIGKSVEGRD-LWVIALSSTPN 678
>SB_6204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +3
Query: 450 REIALETLNLGYNEIH-----SLDRYLFKYTPNLTRLYLNNNPI 566
R LE LNL YN I ++ L Y NL +L L NN I
Sbjct: 166 RNTPLEMLNLAYNRIEDDGAVAIAEALAAYNTNLIKLVLCNNNI 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,841,563
Number of Sequences: 59808
Number of extensions: 346182
Number of successful extensions: 1015
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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