Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11o01f
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 34 0.001
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 27 0.15
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 2.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 9.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 9.6
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 33.9 bits (74), Expect = 0.001
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
NR+ + +FRN+ +L L L N I G + R ++ P L+ LNL N+
Sbjct: 464 NRISNFYNGSFRNLDQLTGLRLIGNDI-GNLSRGMLWDLPN---------LQILNLARNK 513
Query: 492 IHSLDRYLFKYTPNLTRLYLNNN 560
+ ++RY F+ L + L+ N
Sbjct: 514 VQHVERYAFERNMRLEAIRLDGN 536
Score = 33.5 bits (73), Expect = 0.002
Identities = 30/94 (31%), Positives = 42/94 (44%)
Frame = +3
Query: 285 NRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIAL 464
NR+ +S N + I+ AFRN L LDLS N+++ D + L
Sbjct: 410 NRLTLS--GNAIASIDPLAFRNCSDLKELDLSGNELTS-----------VPDALRDLALL 456
Query: 465 ETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPI 566
+TL+LG N I + F+ LT L L N I
Sbjct: 457 KTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDI 490
Score = 31.9 bits (69), Expect = 0.005
Identities = 25/96 (26%), Positives = 44/96 (45%)
Frame = +3
Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
N + ++ F + +L+ L+L+ N++ + F G I L LNL YN
Sbjct: 295 NGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGL--------IRLIVLNLSYNM 346
Query: 492 IHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAI 599
+ +D +FK L L L NN I+ ++ + L +
Sbjct: 347 LTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPL 382
Score = 31.5 bits (68), Expect = 0.007
Identities = 30/109 (27%), Positives = 46/109 (42%)
Frame = +3
Query: 291 IAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALET 470
I ++ N + I+ F+++ L LDL NN I + S F Y L T
Sbjct: 338 IVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDR--IESNAFLPLYN--------LHT 387
Query: 471 LNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISSATNL 617
L L N++ ++ LF L RL L+ N I +D ++ S L
Sbjct: 388 LELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKEL 436
Score = 30.3 bits (65), Expect = 0.016
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 462 LETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIEILDHVSILAISS 605
L+ L+L N I L + F+ +L LYL NN I + +++ L + S
Sbjct: 844 LQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRS 891
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 27.1 bits (57), Expect = 0.15
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 474 NLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIE 569
+L IH+ + Y + Y N +LY N N IE
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNCKKLYYNINYIE 115
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 361 NRGMFLKASSSISITRFDLKLIAILFPGI 275
N G FLKA + +TR D + +++FP +
Sbjct: 132 NEGQFLKAFVAAVLTRQDTQ--SVIFPPV 158
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 105 PCDISVEDTSNLTLNCSRRDI 167
P D+SVE ++ L+C + +
Sbjct: 716 PTDVSVERNKHVALHCQAQGV 736
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 105 PCDISVEDTSNLTLNCSRRDI 167
P D+SVE ++ L+C + +
Sbjct: 712 PTDVSVERNKHVALHCQAQGV 732
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +3
Query: 210 KDGHVLVTFFNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSN 383
K+ ++ N+++ ++ + G+ AI SN ++ AF N+P+ + + +N
Sbjct: 476 KEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNN 533
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +3
Query: 210 KDGHVLVTFFNNSITNITQLSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSN 383
K+ ++ N+++ ++ + G+ AI SN ++ AF N+P+ + + +N
Sbjct: 476 KEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNN 533
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,277
Number of Sequences: 438
Number of extensions: 3271
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -