Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n24f
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 412 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 326
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 129 MTGIWVWLINISATYICYAFGKFSCKVMI 157


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 412 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 326
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 412 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 326
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +2

Query: 350 IEACKDKCGNKVNEIYPYIIQEIKPTLTELGID 448
           ++  K+K  + +  +Y  ++++ KP L  +G D
Sbjct: 333 LDPTKEKLYDAIEALYGDMLKQFKPPLFHMGGD 365


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 196 FISVIEFFITFHWTSV*SPYRYG 128
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 196 FISVIEFFITFHWTSV*SPYRYG 128
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 422 PTLTELGIDTPEEL 463
           PTL ELG DT   L
Sbjct: 207 PTLEELGFDTEGRL 220


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 172 ITFHWTSV*SPYRY 131
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 172 ITFHWTSV*SPYRY 131
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 172 ITFHWTSV*SPYRY 131
           ITF WTS+   Y Y
Sbjct: 79  ITFGWTSIPMLYAY 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,520
Number of Sequences: 336
Number of extensions: 2837
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)