Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n23f
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 85 7e-19
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.45
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 1.8
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 22 5.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.7
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 84.6 bits (200), Expect = 7e-19
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Frame = +3
Query: 84 NPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRW 263
NP RI+GG+ T IN++P +A + T+ + CG I+++R +L+AAHC + T +
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTY---EPGMICGATIISKRYVLTAAHCIIDENTTKL 213
Query: 264 RIRVG-----STFANSGGVVHNVNRIIIHPNYNRRTAD----SDLCILRSNSNIAYNNNV 416
I VG S + V+H++N++IIHP Y+ D +D+ +L++ +I + + V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273
Query: 417 RPINIAGANY-NLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRY 575
P + ++ + V GWG TS G S L+ + + Q C + Y
Sbjct: 274 GPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYY 327
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.45
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -2
Query: 479 SSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNT 300
++ ++V+T + T+ IN VIS G T + SSTS+ NS+ V +
Sbjct: 825 TTEQSVVVTNV---TTTINTPTTSVISMSGTTVPITSLPASSTSI------NSITVEKDV 875
Query: 299 PTVGKGGTNTNTP 261
K TNTP
Sbjct: 876 INDVKTQITTNTP 888
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.4 bits (48), Expect = 1.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 359 SSTSVIVG-MNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGT 222
SS V +G ND++ + +P+ GG+++ +P++ S +VS T
Sbjct: 60 SSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPT 106
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = -2
Query: 482 TSSPNNLVITKIVIGTSNINRTNVVVISY 396
+S+ N ++ +++GT I + +++ISY
Sbjct: 2 SSTEANELVMSVIVGTVVIVSSLIILISY 30
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +3
Query: 120 INQYPGIAALLYTWNWNQWWQ 182
+ Y AA + TWN ++W+
Sbjct: 1178 LRPYLRTAAAILTWNEKRFWE 1198
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 267 IRVGSTFANSGGVVHNVNRIIIHPNYN 347
+R S N GGV H N + H N++
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANHH 287
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 74 SRHSSKPKGQQNN 36
+RHSSK Q NN
Sbjct: 432 ARHSSKSDNQNNN 444
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 384 SNSNIAYNNNVRPINIAGANYN 449
SN I NNN N NYN
Sbjct: 86 SNKTIHNNNNYNNNNYNNYNYN 107
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 303 VVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 425
++ +++ IH N N + ++ +N N YNNN + +
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKL 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,919
Number of Sequences: 438
Number of extensions: 4359
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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