Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n23f
         (621 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g36250.2 68415.m04450 chloroplast division protein FtsZ (FtsZ...    29   3.3  
At2g36250.1 68415.m04449 chloroplast division protein FtsZ (FtsZ...    29   3.3  
At2g48020.2 68415.m06011 sugar transporter, putative similar to ...    28   4.3  
At2g48020.1 68415.m06010 sugar transporter, putative similar to ...    28   4.3  
At3g18080.1 68416.m02299 glycosyl hydrolase family 1 protein con...    28   5.7  

>At2g36250.2 68415.m04450 chloroplast division protein FtsZ
           (FtsZ2-1) identical to chloroplast division protein
           AtFtsZ2-1 [Arabidopsis thaliana] GI:15636809, plastid
           division protein FtsZ [Arabidopsis thaliana] GI:14195704
          Length = 478

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +3

Query: 432 AGANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPI 584
           A +NYN    +V+   G G+ ++      ++  V+ W +N +    R  P+
Sbjct: 112 APSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPV 162


>At2g36250.1 68415.m04449 chloroplast division protein FtsZ
           (FtsZ2-1) identical to chloroplast division protein
           AtFtsZ2-1 [Arabidopsis thaliana] GI:15636809, plastid
           division protein FtsZ [Arabidopsis thaliana] GI:14195704
          Length = 478

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +3

Query: 432 AGANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPI 584
           A +NYN    +V+   G G+ ++      ++  V+ W +N +    R  P+
Sbjct: 112 APSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPV 162


>At2g48020.2 68415.m06011 sugar transporter, putative similar to
           ERD6 protein {Arabidopsis thaliana} GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 463

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 78  PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCG 191
           P N + + GG  T +N + G  A+ YT+N+   W S G
Sbjct: 390 PINIKGVAGGMATLVNWF-GAWAVSYTFNFLMSWSSYG 426


>At2g48020.1 68415.m06010 sugar transporter, putative similar to
           ERD6 protein {Arabidopsis thaliana} GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 463

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 78  PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCG 191
           P N + + GG  T +N + G  A+ YT+N+   W S G
Sbjct: 390 PINIKGVAGGMATLVNWF-GAWAVSYTFNFLMSWSSYG 426


>At3g18080.1 68416.m02299 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to beta-glucosidase BGQ60 precursor GB:A57512
           [Hordeum vulgare]; similar to beta-mannosidase enzyme
           (GI:17226270) [Lycopersicon esculentum]
          Length = 512

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 489 HPNQQPKQLGYHQDCN 442
           HP  +PK LGY QD N
Sbjct: 356 HPTTKPKDLGYQQDWN 371


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,098,888
Number of Sequences: 28952
Number of extensions: 321046
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)