Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n22f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.8  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 389 AKSVSGPFNSLTDSFN 342
           AKS S PF SL  S N
Sbjct: 235 AKSESSPFESLKKSLN 250


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 99  VENFRDFLDIIKD 137
           +ENF DF+  +KD
Sbjct: 277 IENFNDFVTALKD 289


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 99  VENFRDFLDIIKD 137
           +ENF DF+  +KD
Sbjct: 277 IENFNDFVTALKD 289


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 99  VENFRDFLDIIKD 137
           +ENF DF+  +KD
Sbjct: 597 IENFNDFVTALKD 609


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 118 KSRKFSTKLFFGC 80
           +S  FSTK F GC
Sbjct: 86  RSECFSTKYFVGC 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,351
Number of Sequences: 336
Number of extensions: 2271
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)