Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n22f
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 4.1
SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20) 29 4.1
SB_36376| Best HMM Match : DUF360 (HMM E-Value=0.53) 28 5.4
SB_30911| Best HMM Match : TT_ORF2 (HMM E-Value=1.1) 28 5.4
SB_42155| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 28 5.4
SB_33618| Best HMM Match : Guanylate_kin (HMM E-Value=6.3e-13) 28 5.4
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_17887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_49861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_43029| Best HMM Match : Extensin_1 (HMM E-Value=8.9) 28 7.1
SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 27 9.4
SB_33438| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_13754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_54762| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4) 27 9.4
SB_42339| Best HMM Match : LIM (HMM E-Value=8.9) 27 9.4
SB_18769| Best HMM Match : LIM (HMM E-Value=8.9) 27 9.4
SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) 27 9.4
>SB_35568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 437 GEFTDNIVNVGSEVASAKSVSG--PFNSLTDSFNHFVENINKEMD 309
GEF NI V + A + V P NSL + +ENIN +D
Sbjct: 507 GEFISNIFLVPKKTADMRPVINLKPLNSLVQKIHFKMENINVALD 551
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +3
Query: 75 LPQPKKSFVENFRDFLDIIKDEAGHDIEHLFEHY-IEFEEFQRSFDYL---TTKDFRDLI 242
L + K+ V FRD L+ + ++ G ++ L E Y I F + + SF ++ K DL+
Sbjct: 1292 LVKDKEDMVNGFRDRLNTLANDKGQLVDSLKEEYEILFAQKEDSFMHVRDELEKSQEDLL 1351
Query: 243 YEMEDLPEFKAVV 281
+ +L K+ +
Sbjct: 1352 HMQVELDSCKSEI 1364
>SB_57728| Best HMM Match : Usp (HMM E-Value=3.9e-20)
Length = 744
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 474 AEDEEFRVALENLQSEEWDAVFGALWESEQFKAEVDTLAEHGIDV 608
A+D+EF L+ +EE + + L E QF A+ T A+ + V
Sbjct: 252 ADDKEFNETLDMFDAEEGEYIDLVLMEFNQFLADTITRADLSLQV 296
>SB_36376| Best HMM Match : DUF360 (HMM E-Value=0.53)
Length = 259
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 359 LTDSFNHFVENINKEMDVNVVIFQEID--HSFEFRQVFHLIDQVSEVLRGEVVKRTLELL 186
+ D F+ +E + ++ NV++ +D V L+D V+E L +VV + +L
Sbjct: 25 MLDVFDDVIEGLIIDVGENVIVGLVLDVVDDVIVGLVLDLVDDVNEGLVLDVVDDVIVVL 84
Query: 185 KFDVMLEQMLDIMTSLVLNYVKEITE 108
FD+ + D++ L+L+ V + E
Sbjct: 85 MFDI----VDDVIEGLMLDVVDGVIE 106
>SB_30911| Best HMM Match : TT_ORF2 (HMM E-Value=1.1)
Length = 263
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 264 EFKAVVDFLEXXXXXXXXXXXXXXEMIETIGERVKRARHTLSGRDFTSYINDIIGEFPK 440
E KA ++ E IET+ + A H S +D S I I G+F K
Sbjct: 45 EAKAQEEYTEANRVVKRSIRADKRSYIETLATEAEEAAHQDSTKDLYSIIKKISGKFAK 103
>SB_42155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 359 LTDSFNHFVENINKEMDVNVVIFQEID--HSFEFRQVFHLIDQVSEVLRGEVVKRTLELL 186
+ D F+ +E + ++ NV++ +D V L+D V+E L +VV + +L
Sbjct: 25 MLDVFDDVIEGLIIDVGENVIVGLVLDVVDDVIVGLVLDLVDDVNEGLVLDVVDDVIVVL 84
Query: 185 KFDVMLEQMLDIMTSLVLNYVKEITE 108
FD+ + D++ L+L+ V + E
Sbjct: 85 MFDI----VDDVIEGLMLDVVDGVIE 106
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 462 EQKLAEDEEFRVALENLQSEEWDAVFGALWESEQFKAEVD 581
++KLAE+EE R LE + EE+DA+ ++ KAEVD
Sbjct: 1170 QRKLAEEEEKR-RLEEMSEEEYDAL------TDDQKAEVD 1202
>SB_33618| Best HMM Match : Guanylate_kin (HMM E-Value=6.3e-13)
Length = 171
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 159 HLFEHYIEFEEFQRSFDYLTTKDFRDLIYEMEDLPEFKAV 278
H F+H I +F+R+FD + R +I +ED P++ V
Sbjct: 133 HYFDHTITNTDFERTFD-----ELRQVIARLEDEPQWVPV 167
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 264 EFKAVVDFLEXXXXXXXXXXXXXXEMIETIGERVKRARHTLSGRDFTSYINDIIGEFPK 440
E KA ++ E IET+ + A H S +D S I I G+F K
Sbjct: 492 EAKAQEEYTEANRVVKRSIRADKRSYIETLATEAEEAAHQDSTKDLYSIIKKISGKFAK 550
>SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 207 QTNAGTPQIRCNARTNARYHDQPRP*LCQGNHGSFLRS 94
+T G P I C+ Y D P LC N GS L++
Sbjct: 6 RTRKGVPNIACSTLPYPVYRDWRGPYLCGRNKGSKLKA 43
>SB_17887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 375 RHTLSGRDFTSYINDIIGEFPKDKLAAL--YEQKLAEDEEF 491
RH LSG D T+ + ++ F KD +A + E+ +D +F
Sbjct: 60 RHLLSGPDMTNNLLGVLCRFRKDTVALMCDIEKMFFQDNDF 100
>SB_49861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -1
Query: 188 LKFDVMLEQMLDIMTSLVLNYVKEITEVFYEALLRLRQREAKSDQAHKHNSDFHFS 21
LK V+LEQ L +Y KE+ + + L + R + + + + + S+ HF+
Sbjct: 280 LKVVVLLEQGLQACRKRYCDYAKELYKNAADLLSKCRNKSLLTGRTYVYLSEVHFN 335
>SB_43029| Best HMM Match : Extensin_1 (HMM E-Value=8.9)
Length = 199
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -1
Query: 173 MLEQMLDIMTSLVLNYVKEITEVFYEALLRLRQREAKSDQAHKHNSDF 30
M++ I SL L++VK+ +VF+E + ++EAKS Q+ +S +
Sbjct: 43 MMKLRRRISQSLRLSFVKDDDDVFHEKDSK-TEKEAKSQQSSPRSSSY 89
>SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 421
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 149 MTSLVLNYVKEITEVFYEALLRLRQREAKSDQAH--KHNSDFHFSRITSLW 3
+T LVLNYV + + ++ L+ + QAH + NS F+ S ++LW
Sbjct: 212 ITILVLNYVIPVMILTVMSVRVLKYLHRRRQQAHPLQANSTFNASMRSTLW 262
>SB_33438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 328 FSTK*LKLSVRELKGPDTLLADATSLPTLTILSVNSPRINSQPCTNRN 471
FST+ L+ +V+ K P T +++ TL + +PRIN + N++
Sbjct: 39 FSTRLLRKAVKNPKAPSTDISERICCTTL-LQGYPNPRINGEEDNNQD 85
>SB_13754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 328 FSTK*LKLSVRELKGPDTLLADATSLPTLTILSVNSPRINSQPCTNRN 471
FST+ L+ +V+ K P T +++ TL + +PRIN + N++
Sbjct: 39 FSTRLLRKAVKNPKAPSTDISERICCTTL-LQGYPNPRINGEEDNNQD 85
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 405 SYINDIIGEFPKDKLAALYEQKLAEDEEFRVALENLQSEEWDAV 536
SY N++ E +DK AA++++K ++ VAL+ LQ +AV
Sbjct: 699 SYKNEM--ELLRDKYAAVFDEKDSQIARLTVALQGLQQYLQNAV 740
>SB_54762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 27.5 bits (58), Expect = 9.4
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = -1
Query: 407 GSEVASAKSVSGPFNSLTDSFNHFVENINKEMDVNVVIFQEIDHSFEFRQVFHLIDQVSE 228
G+ + V PFN L FN+F+ ++ D+ V + + VFHL +E
Sbjct: 33 GNFIVCYAIVRDPFNELRTPFNYFLLSL-ATTDLIVGVLMD-----TVSTVFHL----TE 82
Query: 227 VLRGEVVK-RTLELLKFDVMLEQMLDIMTSLVLNYVKEITEVFYE 96
VL+ +VV R L +L F + +L + Y+ + V Y+
Sbjct: 83 VLKVDVVDIRILHILYFILTTASILSLAALTFDRYMAVVFPVKYK 127
>SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4)
Length = 954
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 375 RHTLSGRDFTSYINDIIGEFPKDKLAALYEQKL 473
RH LSG D T+ + ++ F KD +A + + K+
Sbjct: 343 RHLLSGPDLTNNLLGVLCRFRKDTVALMCDIKM 375
>SB_42339| Best HMM Match : LIM (HMM E-Value=8.9)
Length = 279
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 150 DIEHLFEHYIEFEEFQRSFD-YLTTKDFRDLIYEMEDL 260
+++HLF Y + ++F +FD + T ++ D+ E +D+
Sbjct: 184 NLQHLFVEYKQVKKFWSAFDNWWTNRNSEDIALEYKDI 221
>SB_18769| Best HMM Match : LIM (HMM E-Value=8.9)
Length = 279
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 150 DIEHLFEHYIEFEEFQRSFD-YLTTKDFRDLIYEMEDL 260
+++HLF Y + ++F +FD + T ++ D+ E +D+
Sbjct: 184 NLQHLFVEYKQVKKFWSAFDNWWTNRNSEDIALEYKDI 221
>SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89)
Length = 1328
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -1
Query: 227 VLRGEVVKRTLELLKFDVMLEQMLDIMTSLVLNYVKEITEVFYEALLRLRQREAKSDQAH 48
VL G+ VK + F+V+L + D+M V+ + T+++ E + + + E + H
Sbjct: 379 VLEGDTVKFEPDFKDFEVVLLNVYDVMIKAVMVVPRVETKLYSEWVHAVIEHEMAGPKEH 438
Query: 47 KHNSDFHFSRIT 12
D + IT
Sbjct: 439 LKFYDKYKDLIT 450
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,455,087
Number of Sequences: 59808
Number of extensions: 303598
Number of successful extensions: 1028
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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