Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n20r
         (560 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    57   2e-07
UniRef50_UPI00015B5416 Cluster: PREDICTED: hypothetical protein;...    36   0.49 
UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21...    36   0.85 
UniRef50_A4LY62 Cluster: Putative uncharacterized protein precur...    35   1.1  
UniRef50_A6LX95 Cluster: Carbohydrate-binding family V/XII; n=1;...    34   2.6  
UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;...    33   3.4  
UniRef50_UPI0000D8D180 Cluster: UPI0000D8D180 related cluster; n...    33   6.0  
UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6; Anaplasmata...    33   6.0  
UniRef50_A4J310 Cluster: Putative uncharacterized protein precur...    33   6.0  
UniRef50_UPI00006CF808 Cluster: hypothetical protein TTHERM_0054...    32   8.0  
UniRef50_A4AB51 Cluster: Putative uncharacterized protein; n=2; ...    32   8.0  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
 Frame = -2

Query: 496 LFVLTAIVAVSTNEVADPRSTDRSNALSIGSITSSDRLLRSFVVSRAATTNS-RAVNVRY 320
           +F+   ++A        PRS      +S+G+I +SDRLL +   SR    N  + VNVRY
Sbjct: 55  VFITKVLLADEEMPFVAPRS-----GMSLGNIGASDRLLSASTHSRNPIANQVQTVNVRY 109

Query: 319 TAPXXXXXXXXXXXGSTQFASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 155
           T             GS Q A+ R   G +G   + +Q  +A  RGF + +++WGR
Sbjct: 110 TGSSSIIILAVRAYGSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIWGR 164


>UniRef50_UPI00015B5416 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 129

 Score = 36.3 bits (80), Expect = 0.49
 Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
 Frame = -2

Query: 502 ALLFVLTAIVAVSTNEVADPRSTDRSNALSIGSITSSDRLLRSFVVSRAATTNSRAVNVR 323
           ALL VL A    S+  V +  +  +S+ L IGS    DRLL+   V +  +   R V   
Sbjct: 10  ALLLVLAAATLASSAGV-NSTNNSKSHHLIIGSRVWGDRLLQRVHVQKDYSW-FRVVKET 67

Query: 322 YTAPXXXXXXXXXXXGSTQF-----ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWG 158
            T P              Q      A V    GG   TFV LQF +   +   F V+++G
Sbjct: 68  RTFPGDGISKITEIQALDQRSDRSGADVALINGGPDQTFVTLQFKSQRSQSIDFVVEIYG 127

Query: 157 R 155
           +
Sbjct: 128 K 128


>UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21;
           Pseudomonadaceae|Rep: Cation-transporting P-type ATPase
           - Pseudomonas putida (strain KT2440)
          Length = 882

 Score = 35.5 bits (78), Expect = 0.85
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +3

Query: 405 LPILKALDLSVDLGSATSLVDTATIAVNTNNRANFILQ 518
           +P+L A D+S+ +GSAT L  T+  AV  +NR   ++Q
Sbjct: 759 VPVLAAADISIAMGSATDLAKTSADAVLLSNRLQALVQ 796


>UniRef50_A4LY62 Cluster: Putative uncharacterized protein
           precursor; n=1; Geobacter bemidjiensis Bem|Rep: Putative
           uncharacterized protein precursor - Geobacter
           bemidjiensis Bem
          Length = 370

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
 Frame = -2

Query: 493 FVLTAIVAVSTNEVADPRSTDRSNALSIGSITSSDRLLRSFVVSRAATTNSRAVNVRYTA 314
           F+LTA    ST    DP  T  S++ +I   T+SD    +F+   AA   SR V     A
Sbjct: 119 FLLTASSLTSTGIKIDPAVTTASSSQNINLSTASDLTFTTFINQIAAAAGSRTVTTTTDA 178

Query: 313 PXXXXXXXXXXXGST-QFASVRRTGGG 236
                         T        TGGG
Sbjct: 179 QAHITASVNGLASGTIVLPPASSTGGG 205


>UniRef50_A6LX95 Cluster: Carbohydrate-binding family V/XII; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep:
           Carbohydrate-binding family V/XII - Clostridium
           beijerinckii NCIMB 8052
          Length = 369

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 22/104 (21%), Positives = 44/104 (42%)
 Frame = -2

Query: 457 EVADPRSTDRSNALSIGSITSSDRLLRSFVVSRAATTNSRAVNVRYTAPXXXXXXXXXXX 278
           E++D  +T  SN +++    + D  L+  ++S A++ N+ A  +    P           
Sbjct: 205 ELSDGSNTVTSNQITVTVPKAGDNTLQPAILS-ASSVNNGAYTLTAVVPKNNTATSYKIY 263

Query: 277 GSTQFASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR*NA 146
             T  AS      GVG   ++    N  +  + +TV ++   N+
Sbjct: 264 EGTTVASTGALTSGVGEVSISYAITNKAKGSYDYTVVLYDSTNS 307


>UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 136

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
 Frame = -2

Query: 505 FALLFVLTAIVAVSTNEVAD------PRSTDRSNALSIGSITSSDRLL-RSFVVSRAATT 347
           FA L V  A+VAV++             + ++S+ L IG+  + DRL+ +  +V  +   
Sbjct: 7   FAALAVALAVVAVNSTPYYGGAYQQYAAAPNKSHNLIIGNRQAGDRLVYQENIVKPSKWL 66

Query: 346 NSRAVNVRYTAPXXXXXXXXXXXGSTQF--ASVRRTGGGVGFTFVNLQFVNAPRRGFSFT 173
               V   +                T    A   R  GGVG++ V L+F +    G +F 
Sbjct: 67  QVIEVKKSFNITGYLITQIRAMDQKTNGNGAIASRVDGGVGYSNVTLKFKSQRSHGINFV 126

Query: 172 VQVWGR*NAY 143
           VQ++ R   Y
Sbjct: 127 VQIYARPRYY 136


>UniRef50_UPI0000D8D180 Cluster: UPI0000D8D180 related cluster; n=1;
           Danio rerio|Rep: UPI0000D8D180 UniRef100 entry - Danio
           rerio
          Length = 988

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 240 PPVRRTLANCVDPRTRTALTRLPAGAVYLTLTARELVVAARLTTKLRKSLSLEVILPILK 419
           P V+  +AN + P  R A +         TLT+       R  + + K++    ILP+L 
Sbjct: 453 PNVQPGIANLISPLRRNARSLDFTTESVFTLTSHLYNFHKRANSFVYKTIHFNQILPVLP 512

Query: 420 ALDLSVDLGS 449
           A ++S DL S
Sbjct: 513 ATEVSADLSS 522


>UniRef50_Q5PAN1 Cluster: Magnesium transporter; n=6;
           Anaplasmataceae|Rep: Magnesium transporter - Anaplasma
           marginale (strain St. Maries)
          Length = 483

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +3

Query: 288 TALTRLPAGAVYLTLTARELVVAARLTTKLRKSLSLEVILPILKALDLSVDLGSATSLVD 467
           T + RLP   V L  ++   +V    +  +R  ++L +I+P++ ++  +  L + T  + 
Sbjct: 315 TVVKRLPWLLVNLLTSSASSIVIGWFSETIRSFIALSIIMPMIASMSGNSGLQALTVTIR 374

Query: 468 T-ATIAVNTNNRANFILQETCTGTQN 542
             AT  +   N    + +E C G  N
Sbjct: 375 ALATKQLTYRNSRRLLFKELCVGFVN 400


>UniRef50_A4J310 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 118

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = -2

Query: 514 KMKFALLFVLTAIVAVSTNEVADPRSTDRSNAL-SIGSITSSDRLLRSFV 368
           K K  +LF + AI+A++T   ADP + D +  L ++ + T +D++L+ F+
Sbjct: 6   KDKILILFSIMAILALATPCFADPANPDITTGLGNVDAKTLADKILKIFI 55


>UniRef50_UPI00006CF808 Cluster: hypothetical protein
           TTHERM_00543650; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00543650 - Tetrahymena
           thermophila SB210
          Length = 1199

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 68  KKWGERIFCANEKTKTS-CLCM*TSRICILASPNLYCKAKS 187
           + +  +  C  EK+K S CLC    + CI +  N YCK +S
Sbjct: 359 RNFNNQEICFTEKSKNSGCLCQENIQECIKSQKNKYCKDQS 399


>UniRef50_A4AB51 Cluster: Putative uncharacterized protein; n=2;
           Congregibacter litoralis KT71|Rep: Putative
           uncharacterized protein - Congregibacter litoralis KT71
          Length = 236

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -2

Query: 451 ADPRSTDRSNALSIGSITSSDRLLRSFVVSRAATTNSRA 335
           A PRS D  NA S  S+  SD+  R+ + +R+  TN+ A
Sbjct: 61  AHPRSHDLDNAASPSSLAFSDKQARAVLANRSGDTNTDA 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,238,643
Number of Sequences: 1657284
Number of extensions: 8088343
Number of successful extensions: 23701
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23687
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)