Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n20f
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   2.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -3

Query: 231 LTARELVVAARLTTKLRKSLSLEVILPILKALDLSVDLGSATSLVDTATIAVNTNNRANF 52
           L A  + V  R  TKL K   +  ++P L   D  +      ++ DTA +    NN   +
Sbjct: 139 LYALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIAMGDTADMKKTYNNIDYY 198

Query: 51  ILQETCTG 28
           +L    TG
Sbjct: 199 LLAANYTG 206


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -3

Query: 231 LTARELVVAARLTTKLRKSLSLEVILPILKALDLSVDLGSATSLVDTATIAVNTNNRANF 52
           L A  + V  R  TKL K   +  ++P L   D  +      ++ DTA +    NN   +
Sbjct: 139 LYALSVAVIHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIAMGDTADMKKTYNNIDYY 198

Query: 51  ILQETCTG 28
           +L    TG
Sbjct: 199 LLAANYTG 206


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 440 TRSFCFFVCTKNSFSPFF 493
           T +FC   C  N  +PFF
Sbjct: 41  TNAFCLPFCGPNVINPFF 58


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 440 TRSFCFFVCTKNSFSPFF 493
           T +FC   C  N  +PFF
Sbjct: 40  TNAFCLPFCGPNVINPFF 57


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = -3

Query: 291 VDPRTRTALTRLPAGAVYLTLTARELVVAARLTTKLRKSLSLEVILPILKAL 136
           V  +  + L R PAG+V+        VVA    T + K  ++     ILK +
Sbjct: 74  VHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCV 125


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 542 KKKDKEAS**IRESLIKKMGRTNFLCKRKNKNFVSLHVNVQNMHFSV 402
           KKKD E +  IRE +     RT F  KR+     S+ +N   + F V
Sbjct: 149 KKKDIEEALKIREEIRVDPFRTGFEHKRQP---TSIDLNAVRLCFQV 192


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 542 KKKDKEAS**IRESLIKKMGRTNFLCKRKNKNFVSLHVNVQNMHFSV 402
           KKKD E +  IRE +     RT F  KR+     S+ +N   + F V
Sbjct: 149 KKKDIEEALKIREEIRVDPFRTGFEHKRQP---TSIDLNAVRLCFQV 192


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 136 RSISGSGVSHFISRHRDDRGQYEQ 65
           +++ G+ + H ++ HR  R  YE+
Sbjct: 148 KNLGGTTLHHGMAYHRGHRKDYER 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,610
Number of Sequences: 438
Number of extensions: 2210
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)