Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n19r
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    25   0.67 
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    25   0.67 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    25   0.67 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    25   0.67 

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 741 ESVPIYGTKI*VTVLCNSFIRNMRRIVLLKLKCKPFSYGS 622
           ++VP+ G  +    L N F + ++   L+ +KCKP+  GS
Sbjct: 29  DAVPLIGEDL----LVNDFFK-VKPSALVSVKCKPYHVGS 63


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 741 ESVPIYGTKI*VTVLCNSFIRNMRRIVLLKLKCKPFSYGS 622
           ++VP+ G  +    L N F + ++   L+ +KCKP+  GS
Sbjct: 44  DAVPLIGEDL----LVNDFFK-VKPSALVSVKCKPYHVGS 78


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 741 ESVPIYGTKI*VTVLCNSFIRNMRRIVLLKLKCKPFSYGS 622
           ++VP+ G  +    L N F + ++   L+ +KCKP+  GS
Sbjct: 262 DAVPLIGEDL----LVNDFFK-VKPSALVSVKCKPYHVGS 296


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 741 ESVPIYGTKI*VTVLCNSFIRNMRRIVLLKLKCKPFSYGS 622
           ++VP+ G  +    L N F + ++   L+ +KCKP+  GS
Sbjct: 262 DAVPLIGEDL----LVNDFFK-VKPSALVSVKCKPYHVGS 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,823
Number of Sequences: 336
Number of extensions: 3512
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)