Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n19f
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703046-1|AAU34193.1|  405|Homo sapiens AKNA transcript F2 prot...    31   3.1  
AY703045-1|AAU34192.1|  640|Homo sapiens AKNA transcript F1 prot...    31   3.1  
AF286341-1|AAK83024.1|  633|Homo sapiens AT-hook protein AKNA pr...    31   3.1  
U77327-1|AAC31117.1|  299|Homo sapiens Ki-1/57 intracellular ant...    30   5.5  
AL133477-4|CAI39620.1|  413|Homo sapiens hyaluronan binding prot...    30   5.5  
AF241831-1|AAF62546.1|  413|Homo sapiens intracellular hyalurona...    30   5.5  

>AY703046-1|AAU34193.1|  405|Homo sapiens AKNA transcript F2
           protein.
          Length = 405

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 385 PARG-KRLGNRSPGPPDCHGDTLLRGKFFPRSFLPKSVRRPGCGLRFAIFVILLESV 218
           P+RG  R G R   PPDC G    R +  P   LP S R P C +   +  + L+ +
Sbjct: 319 PSRGASRRGRRHAHPPDC-GIWQQRPQHQPLQPLPTSPRFPSCLIHLPLCTMRLQDL 374


>AY703045-1|AAU34192.1|  640|Homo sapiens AKNA transcript F1
           protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 385 PARG-KRLGNRSPGPPDCHGDTLLRGKFFPRSFLPKSVRRPGCGLRFAIFVILLESV 218
           P+RG  R G R   PPDC G    R +  P   LP S R P C +   +  + L+ +
Sbjct: 554 PSRGASRRGRRHAHPPDC-GIWQQRPQHQPLQPLPTSPRFPSCLIHLPLCTMRLQDL 609


>AF286341-1|AAK83024.1|  633|Homo sapiens AT-hook protein AKNA
           protein.
          Length = 633

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 385 PARG-KRLGNRSPGPPDCHGDTLLRGKFFPRSFLPKSVRRPGCGLRFAIFVILLESV 218
           P+RG  R G R   PPDC G    R +  P   LP S R P C +   +  + L+ +
Sbjct: 547 PSRGASRRGRRHAHPPDC-GIWQQRPQHQPLQPLPTSPRFPSCLIHLPLCTMRLQDL 602


>U77327-1|AAC31117.1|  299|Homo sapiens Ki-1/57 intracellular
           antigen protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 261 QPGRRTDFGRNDRGKNFPRNNVSPWQSGGPGERLPNLFPLAG 386
           +PG R D  R  RG+  PR  +     GGPG R+ + F   G
Sbjct: 57  KPGDRFDRDRPLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRG 98


>AL133477-4|CAI39620.1|  413|Homo sapiens hyaluronan binding protein
           4 protein.
          Length = 413

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 261 QPGRRTDFGRNDRGKNFPRNNVSPWQSGGPGERLPNLFPLAG 386
           +PG R D  R  RG+  PR  +     GGPG R+ + F   G
Sbjct: 171 KPGDRFDRDRPLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRG 212


>AF241831-1|AAF62546.1|  413|Homo sapiens intracellular
           hyaluronan-binding protein protein.
          Length = 413

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 261 QPGRRTDFGRNDRGKNFPRNNVSPWQSGGPGERLPNLFPLAG 386
           +PG R D  R  RG+  PR  +     GGPG R+ + F   G
Sbjct: 171 KPGDRFDRDRPLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRG 212


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,865,692
Number of Sequences: 237096
Number of extensions: 2597820
Number of successful extensions: 6063
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6063
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)