Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n18r
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 386 e-107
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 386 e-107
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 386 e-107
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 385 e-107
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 385 e-107
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 385 e-107
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 385 e-107
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 385 e-107
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 338 8e-93
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 204 3e-52
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 43 0.001
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.002
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.002
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.015
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 7.0
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 386 bits (949), Expect = e-107
Identities = 173/218 (79%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 386 bits (949), Expect = e-107
Identities = 173/218 (79%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 386 bits (949), Expect = e-107
Identities = 173/218 (79%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 385 bits (948), Expect = e-107
Identities = 172/218 (78%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 385 bits (948), Expect = e-107
Identities = 172/218 (78%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 385 bits (948), Expect = e-107
Identities = 172/218 (78%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 385 bits (948), Expect = e-107
Identities = 172/218 (78%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 385 bits (948), Expect = e-107
Identities = 172/218 (78%), Positives = 194/218 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 345
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVI 137
Query: 344 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 165
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP
Sbjct: 138 SHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWP 197
Query: 164 YVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKV 51
VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKV
Sbjct: 198 RVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 338 bits (832), Expect = 8e-93
Identities = 152/189 (80%), Positives = 168/189 (88%)
Frame = -2
Query: 617 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 438
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 437 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 258
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 257 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 78
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 77 RGTSAGRKV 51
R AGRKV
Sbjct: 181 RDAPAGRKV 189
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 204 bits (497), Expect = 3e-52
Identities = 91/117 (77%), Positives = 104/117 (88%)
Frame = -2
Query: 704 SHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 525
+H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFI
Sbjct: 14 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 73
Query: 524 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 354
A EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 74 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 43.2 bits (97), Expect = 0.001
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Frame = -2
Query: 701 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 522
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 521 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 357
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 356 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
++ + ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGHSIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -2
Query: 701 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 522
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 521 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 357
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 356 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -2
Query: 701 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 522
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 521 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 357
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 356 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.015
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -2
Query: 545 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 381
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 380 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 7.0
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 270
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,326,104
Number of Sequences: 237096
Number of extensions: 2915239
Number of successful extensions: 6562
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6560
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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