Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n16f
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071853-1|AAH71853.1|  356|Homo sapiens GREB1 protein protein.        33   0.85 
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot...    31   2.6  
AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.    31   2.6  
AK092754-1|BAC03965.1|  615|Homo sapiens protein ( Homo sapiens ...    31   3.4  
BC032587-1|AAH32587.1|  442|Homo sapiens tubby like protein 3 pr...    30   6.0  
AF045583-1|AAC95431.1|  442|Homo sapiens tubby like protein 3 pr...    30   6.0  

>BC071853-1|AAH71853.1|  356|Homo sapiens GREB1 protein protein.
          Length = 356

 Score = 32.7 bits (71), Expect = 0.85
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -3

Query: 299 KCRELKSSALTSVTRPEKLMMSDAPGGLQEPA--*PSRRRGSAALNNSPISLNKFEITMS 126
           KC++L  + L ++ RP  L  S  PG   +PA      R G  A    P+SL + ++   
Sbjct: 275 KCQQLAKNNLLALPRPSALGSSACPGRPGDPALLWAKARGGMGAAGLGPLSLLESDVASM 334

Query: 125 RMR 117
           R+R
Sbjct: 335 RVR 337


>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
           precursor protein.
          Length = 1253

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
 Frame = -2

Query: 534 DIANSYCSSDVTDND-----VVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGT 370
           D +NS  SSD +D+D        + D S S S+D     SS S    D+++++D S S +
Sbjct: 556 DSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS-S 614

Query: 369 D*C*NSGNSQD*VESGADVADT 304
           D   +S +  D  +S +D +D+
Sbjct: 615 DSSDSSDSKSDSSKSESDSSDS 636



 Score = 30.3 bits (65), Expect = 4.5
 Identities = 23/71 (32%), Positives = 38/71 (53%)
 Frame = -2

Query: 513 SSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD* 334
           SSD +D+D     D S S S+D     SS S    D++++++ S S      +S NS D 
Sbjct: 710 SSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDS--SDSSNSSDS 767

Query: 333 VESGADVADTT 301
            +S +D +D++
Sbjct: 768 SDS-SDSSDSS 777


>AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.
          Length = 788

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
 Frame = -2

Query: 534 DIANSYCSSDVTDND-----VVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGT 370
           D +NS  SSD +D+D        + D S S S+D     SS S    D+++++D S S +
Sbjct: 94  DSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDS-S 152

Query: 369 D*C*NSGNSQD*VESGADVADT 304
           D   +S +  D  +S +D +D+
Sbjct: 153 DSSDSSDSKSDSSKSESDSSDS 174


>AK092754-1|BAC03965.1|  615|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35435 fis, clone SMINT2002620. ).
          Length = 615

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -3

Query: 467 AVASATTFSRASPPEAKDLRTRLKMRISP---SAEPTDAETLGTARTKLSRVP 318
           A    ++F R S     DLRT    R+     S+  TD++ LG+ RTK  R P
Sbjct: 259 AFLKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSP 311


>BC032587-1|AAH32587.1|  442|Homo sapiens tubby like protein 3
           protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = +1

Query: 85  HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 264
           H+ + ++P +    D ++S   N   E L     +     A  W+    S ++NF GRVT
Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384

Query: 265 DVKADDFSSLHLRRVSYV 318
                +F  +H     Y+
Sbjct: 385 QASVKNFQIVHKNDPDYI 402


>AF045583-1|AAC95431.1|  442|Homo sapiens tubby like protein 3
           protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/78 (24%), Positives = 33/78 (42%)
 Frame = +1

Query: 85  HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 264
           H+ + ++P +    D ++S   N   E L     +     A  W+    S ++NF GRVT
Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384

Query: 265 DVKADDFSSLHLRRVSYV 318
                +F  +H     Y+
Sbjct: 385 QASVKNFQLVHKNDPDYI 402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,934,370
Number of Sequences: 237096
Number of extensions: 1325320
Number of successful extensions: 3319
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3319
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)