Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n15r
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7I3G4 Cluster: Putative uncharacterized protein; n=4; ...    38   0.39 
UniRef50_A6H5K0 Cluster: Putative uncharacterized protein; n=1; ...    37   0.68 
UniRef50_Q899W4 Cluster: Hypothetical membrane-spanning protein;...    36   1.2  
UniRef50_Q22W02 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q7RN17 Cluster: Putative uncharacterized protein PY0200...    33   6.4  
UniRef50_A4VE75 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;...    33   8.4  
UniRef50_Q8I555 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_A7I3G4 Cluster: Putative uncharacterized protein; n=4;
           Campylobacter hominis ATCC BAA-381|Rep: Putative
           uncharacterized protein - Campylobacter hominis (strain
           ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
          Length = 175

 Score = 37.5 bits (83), Expect = 0.39
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +1

Query: 115 YSNVFNRRF*YTHISEY-KIRNCYRTIKIQIFFYCTLKFIFV*FFQCRFS*IIFKKTLLI 291
           ++N F R F Y  ++   K  N Y  +   I +   L F+F+     ++S I +KKT  +
Sbjct: 4   FNNAFWREFQYKIVNVVIKFANEYPIVSWIILYIVGLFFLFLNIKLIKYSLIAYKKTNQV 63

Query: 292 SLMTISIYMACFFILVLFEF 351
            ++ + ++ ACF +++ F F
Sbjct: 64  KIIKL-VFAACFQVVIFFYF 82


>UniRef50_A6H5K0 Cluster: Putative uncharacterized protein; n=1;
           Cycas taitungensis|Rep: Putative uncharacterized protein
           - Cycas taitungensis (Prince sago) (Cycas taiwaniana)
          Length = 85

 Score = 36.7 bits (81), Expect = 0.68
 Identities = 17/55 (30%), Positives = 33/55 (60%)
 Frame = +1

Query: 181 YRTIKIQIFFYCTLKFIFV*FFQCRFS*IIFKKTLLISLMTISIYMACFFILVLF 345
           + T+KI  FF+  + + F+ F  C+++  ++ + L    MTI+I+   FF+L+ F
Sbjct: 3   FYTMKIFFFFFSHISYTFIIFRSCKWT--MYTENLSFRRMTIAIFGNIFFLLISF 55


>UniRef50_Q899W4 Cluster: Hypothetical membrane-spanning protein;
           n=1; Clostridium tetani|Rep: Hypothetical
           membrane-spanning protein - Clostridium tetani
          Length = 158

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 277 KTLLISLMTISIYMACFFILVLFEFERVNYI--NFFRATSLEYIFW 408
           K  LI+L +I I+  CFF+ +LF +  +  I   FF+ T+ EY FW
Sbjct: 8   KWSLITLTSIIIFN-CFFMTILFYYNNIIIIVNRFFKKTTEEYYFW 52


>UniRef50_Q22W02 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2101

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = +1

Query: 271 FKKTLLISLM-TISIYMACFFILVLFEFERVNYI-NFFRATSLEYIF 405
           + + L+IS++ TI +   CFF   + EF  +N+I NF   TS+ YI+
Sbjct: 55  YPRALVISIISTIVVSCMCFFTQFVLEFVTINFIQNFSFRTSIYYIY 101


>UniRef50_Q7RN17 Cluster: Putative uncharacterized protein PY02008;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY02008 - Plasmodium yoelii yoelii
          Length = 1042

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 282 GLFENDLRESALKESHKDKLECTIKKNLNFYCSIAVSDFVFAYMCILKSSIKNITV 115
           G+F N+LRE   K+ H  K    I K +N+YC    + F ++++ I   +  NI +
Sbjct: 763 GIFYNNLREQLSKKKHFKK---PINKRVNYYCLGINNPFNYSWISIYPYTNNNIKI 815


>UniRef50_A4VE75 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 293

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
 Frame = +1

Query: 274 KKTLLISLMTISIYMACFFILVLFEFERVNY--INFFRATSLEYIFWACQRASWHAHRQC 447
           K++  I +     Y+ CF + + F FE + +   N ++ T+   IF+     + + HR  
Sbjct: 178 KRSFYILINLFQSYLICFLLQIFFNFEEIKFCQTNLYKNTNTFDIFFNFLLKASNYHRMV 237

Query: 448 QCANRFC*QRQSF*TSQANN*CWIITDAL*K---KNNTYFFKFQ--LIKSLISFIN 600
              +      Q     QAN    +      K   + N Y+F FQ  L   L  ++N
Sbjct: 238 SVISNQLVHHQFTYDKQANQFLCLTIHLFIKSINQTNKYYFIFQQSLQNKLFQYVN 293


>UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;
           n=1; Eimeria tenella|Rep: hypothetical protein,
           conserved - Eimeria tenella
          Length = 1486

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 178 CYRTIKIQIFF---YCTLKFIFV*-FFQCRFS*IIFKKTLLISLMTISIYMACFFILVLF 345
           C+  I + IFF   +C + F+F+  FF C F   +F   LL  L + S +   FF+L  F
Sbjct: 524 CFPLIFLFIFFLFSFCFVLFLFLFVFFFCPFCSFLFFYFLLF-LYSFSCFSFLFFLLSFF 582

Query: 346 EFERVNYINF 375
            F   ++ +F
Sbjct: 583 SFFVFSFFSF 592


>UniRef50_Q8I555 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 509

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = +1

Query: 145 YTHISEYKIRNCYRTIKIQIFFYCTLKFIFV*FFQCRFS*IIFKK--TLLISLMTISIYM 318
           Y  +S    RN Y+      + +  L  ++  FF   F   +F      L  L+ IS ++
Sbjct: 60  YIIVSFLPQRNVYKKRSKLNYIFAKLLLLYFIFFFIHFVINLFNNFPLNLFYLIIISFHL 119

Query: 319 ACFFILVLFEFERVNYINFFRATSLEYIFW 408
           + FF+  L   E  NY NF    +  Y+++
Sbjct: 120 SEFFLSFLHNKENANYYNFLVNPNSVYVYF 149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,282,983
Number of Sequences: 1657284
Number of extensions: 13170113
Number of successful extensions: 29291
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29280
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)