Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n15r
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.40 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 178 CYRTIKIQIFFYCTLKFIFV*FFQCRFS*IIFKKTLLISLM 300
           C   I + I+++C    IF   F C FS    K T  ++++
Sbjct: 290 CALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVV 330


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 419 VQVGTHIDSANVPTDF 466
           +QVGTH D   VP +F
Sbjct: 685 LQVGTHADLPPVPPNF 700


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 675 ILCVLFVININQ*SXVLMDLQLSPLRSNSRSFFV 776
           +L VLF + +   S VL+ L +S  R +  +FF+
Sbjct: 52  VLWVLFTMIVLGNSAVLVALLVSKSRKSRMNFFI 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,534
Number of Sequences: 336
Number of extensions: 3782
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)