Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n15r
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67737-3|CAA91538.2|  399|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z75712-7|CAB00046.1|  208|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z67737-3|CAA91538.2|  399|Caenorhabditis elegans Hypothetical
           protein T01H10.3 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 402 ILGVSACKLARTSTVPMCQQILLTTSIVLNI 494
           ILGV A K+ RT T+P+    ++T  +++ I
Sbjct: 305 ILGVMADKIPRTGTIPLLGVYIITNLVIMLI 335


>Z75712-7|CAB00046.1|  208|Caenorhabditis elegans Hypothetical
           protein K04G2.9 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/50 (20%), Positives = 30/50 (60%)
 Frame = +1

Query: 256 FS*IIFKKTLLISLMTISIYMACFFILVLFEFERVNYINFFRATSLEYIF 405
           F  I+F +T+L+++ ++++ +   F++  F    +++++FF     + +F
Sbjct: 76  FKGILFGQTILLTVASVAMLLTFIFLIAYFFTLHLSHLDFFCWREADLLF 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,480,198
Number of Sequences: 27780
Number of extensions: 337025
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)