Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n15f
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   8.1  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 579 VQVGTHIDSANVPTDF 532
           +QVGTH D   VP +F
Sbjct: 685 LQVGTHADLPPVPPNF 700


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 344 DIYLFN*ILCVLFVININQ*SNVF 273
           DIY+   I+ V+F   +N  +N+F
Sbjct: 254 DIYMIVYIIVVIFWYTVNASTNIF 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 344 DIYLFN*ILCVLFVININQ*SNVF 273
           DIY+   I+ V+F   +N  +N+F
Sbjct: 254 DIYMIVYIIVVIFWYTVNASTNIF 277


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 270 IKNIRLLIYVNNK*NAQNLIKKIN 341
           +KNI++L+Y N     + L+  IN
Sbjct: 459 VKNIQMLVYQNEAEEVKILLDVIN 482


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 GEKLLCVLSGIFTTL 178
           G  LLC  +G+ TTL
Sbjct: 50  GSNLLCASNGLVTTL 64


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/18 (44%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
 Frame = -3

Query: 548 MCQQILL-TTSIVLNIPS 498
           +C+ ++  TTSI++N+PS
Sbjct: 423 LCELLIEGTTSILINVPS 440


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 454 FFFKERQLLSSINYLLGM 507
           F   E  +L ++NY LGM
Sbjct: 98  FLLSENLVLVTVNYRLGM 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,797
Number of Sequences: 336
Number of extensions: 2906
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)