Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11n13f
(571 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n... 36 0.67
UniRef50_A0V6M7 Cluster: ATP-dependent transcriptional regulator... 35 1.2
UniRef50_Q6CNF1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 35 1.2
UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1... 35 1.5
UniRef50_A6S492 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 34 2.0
UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;... 34 2.7
UniRef50_A6RQC3 Cluster: Putative uncharacterized protein; n=2; ... 34 2.7
UniRef50_UPI0000D5709E Cluster: PREDICTED: similar to Rho GTPase... 33 3.6
UniRef50_Q2P155 Cluster: Putative uncharacterized protein XOO296... 33 3.6
UniRef50_Q11BJ4 Cluster: Putative uncharacterized protein precur... 33 3.6
UniRef50_Q0LR67 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2; Desulf... 33 3.6
UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genom... 33 3.6
UniRef50_Q4Q1T2 Cluster: Putative uncharacterized protein; n=3; ... 33 3.6
UniRef50_Q380F3 Cluster: ENSANGP00000027331; n=1; Anopheles gamb... 33 3.6
UniRef50_Q0H230 Cluster: TMP repeat protein; n=2; unclassified M... 33 4.7
UniRef50_UPI0000F1D904 Cluster: PREDICTED: similar to LOC494811 ... 33 6.2
UniRef50_Q1L8C0 Cluster: Novel tub family member protein; n=11; ... 33 6.2
UniRef50_A6VWU7 Cluster: Secretion protein HlyD family protein; ... 33 6.2
UniRef50_A1WNZ9 Cluster: TonB-dependent siderophore receptor; n=... 33 6.2
UniRef50_UPI000038D615 Cluster: hypothetical protein Npun0200557... 32 8.2
UniRef50_A4S431 Cluster: Predicted protein; n=1; Ostreococcus lu... 32 8.2
UniRef50_A2QTZ0 Cluster: Catalytic activity: Triacylglycerol + H... 32 8.2
>UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n=1;
unknown|Rep: UPI00015B932D UniRef100 entry - unknown
Length = 1018
Score = 35.9 bits (79), Expect = 0.67
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 298 HLRRVSYVGTRLNLVLAVPRVSA-SVGSAEGEIR 396
HLRR++YVG R+N + A P SA VG+ +G IR
Sbjct: 355 HLRRITYVGARVNALAAGPGGSAVFVGAEDGSIR 388
>UniRef50_A0V6M7 Cluster: ATP-dependent transcriptional regulator,
MalT-like, LuxR family; n=1; Delftia acidovorans
SPH-1|Rep: ATP-dependent transcriptional regulator,
MalT-like, LuxR family - Delftia acidovorans SPH-1
Length = 924
Score = 35.1 bits (77), Expect = 1.2
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Frame = -3
Query: 521 IAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTAR 342
+ AP+ ++ + S T + A+ PEA RL + AEP D L A
Sbjct: 789 LLAPVLQRVLSPSLSLSQTPSLTRRTEAAEPEAAAHAQRLLSALGEPAEPADPPELQAAD 848
Query: 341 TKLSRVPT-----*LTRRKCR--ELKSSALTSVTRPEKLMMSDA 231
VP LTR++ R EL +S ++ EKL +SD+
Sbjct: 849 APQGPVPATALAEPLTRKELRVLELLASGYSNAAMAEKLFVSDS 892
>UniRef50_Q6CNF1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 368
Score = 35.1 bits (77), Expect = 1.2
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = -2
Query: 555 DLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFS 379
D +V+ + S SS+ +D+ G GSGS S +D G S S D+ N+D S S
Sbjct: 20 DKKVKSSSSGSESSSNSSDSSSSGSGSGSGSGSDSDSDSGSDSSSSSSSDSESNSDSSSS 79
Query: 378 GTD*C*NSGNSQD*VESGAD---VADTTQMQGAEVISLDVSHAAREVND 241
+ +S +S S +D +D++ ++ S S A+ E +D
Sbjct: 80 SSSSSSSSSSSDSDSSSDSDSSSSSDSSSSSDSDSDSDSSSSASSESDD 128
>UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to RACK7 -
Nasonia vitripennis
Length = 1098
Score = 34.7 bits (76), Expect = 1.5
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = -3
Query: 533 SPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETL 354
+P A P S + S T+A ASA PP++ DLR+ P A P A+
Sbjct: 845 TPTTSATPPSSSSSSSYPLTKAAASANDAMVYIPPQSNDLRSSAYELPPPEAGPATAQIH 904
Query: 353 GTARTKLSRV 324
T+R +RV
Sbjct: 905 NTSRDLANRV 914
>UniRef50_A6S492 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Botryotinia fuckeliana B05.10
Length = 1220
Score = 34.3 bits (75), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 561 EIDLEVRFDIANSYCSSDVTDNDVVCEGD-GSGSLSNDVLKGKSSGSERPQDAAENADFS 385
E D+ D+ + +++V+ E D G+GS SN + K + G ++E++D
Sbjct: 1054 ESDVGGAIDLLTGEATGATMNDEVISEDDSGNGSSSNGMKKDEEGGECENSSSSEDSDVE 1113
Query: 384 FSGTD 370
+GTD
Sbjct: 1114 VAGTD 1118
>UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;
n=1; Stenotrophomonas maltophilia|Rep: Putative mating
pair formation protein - Xanthomonas maltophilia
(Pseudomonas maltophilia) (Stenotrophomonasmaltophilia)
Length = 560
Score = 33.9 bits (74), Expect = 2.7
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -2
Query: 480 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGT--D*C*NSGNSQD*VESGADVADT 307
G+G+G+ N++ +G G P DAA++++ +G D SG+ D ESG D
Sbjct: 362 GEGAGTALNELGEGVGRGGAAPGDAADSSEGGGAGDVGDSASESGDGGDGQESGEDEGGP 421
Query: 306 TQMQGAEVIS-LDVSHAAREVNDV 238
+ E S DV + + +DV
Sbjct: 422 SAANDEEYNSGTDVQDESGDGSDV 445
>UniRef50_A6RQC3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1273
Score = 33.9 bits (74), Expect = 2.7
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = -3
Query: 503 LTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRV 324
L M +ARE++A + S P + RTR + + P+ +P + TL ++ + +
Sbjct: 84 LEEMKAARESDANSQGCEESPLHPNSVQSKRTRAGLPVLPTVKPNNGNTLRSSNINGNPI 143
Query: 323 PT*LTRRKCRELKSSALTSVTRPEKLMMS-DAPGGLQEPA*PSRRRGSAALNNS 165
P C +L++ T+ L ++ + P L E R R A L +
Sbjct: 144 PL-----PCAQLRAMEGEEYTQKSNLSLTQENPESLYEALELQRLRDQAVLGTN 192
>UniRef50_UPI0000D5709E Cluster: PREDICTED: similar to Rho GTPase
activating protein 21; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Rho GTPase activating protein 21 -
Tribolium castaneum
Length = 1930
Score = 33.5 bits (73), Expect = 3.6
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
Frame = +1
Query: 190 LRRDGYAGSWSPPGASDIINFS------GRVTDVK-ADDFSS-LHLRRVSYV 321
LRR G GSWSP G SD + S R ++V+ ADD++ H+ RVS V
Sbjct: 953 LRRWGSTGSWSPMGTSDAVEHSLASGVDMRASEVRVADDYTKRKHVLRVSSV 1004
>UniRef50_Q2P155 Cluster: Putative uncharacterized protein XOO2967;
n=6; Xanthomonas|Rep: Putative uncharacterized protein
XOO2967 - Xanthomonas oryzae pv. oryzae (strain MAFF
311018)
Length = 1454
Score = 33.5 bits (73), Expect = 3.6
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 199 DGYAGSWSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYV-GTRLNLVLAVPRVSASVG 375
D +G SP A D +N +G ++A + + +VS+ GTR+ +LA V ++
Sbjct: 816 DPASGQVSP--APDAVNRNGAAQVLQAHPAAVASMTQVSFAAGTRIAQILAKAGVDVTLP 873
Query: 376 SAEGE-IRIFSRVLRSFASGGLALENVVAEATAS 474
A + +RV SFA+ GL V +TAS
Sbjct: 874 PARSRNLAQGARVSASFAAAGLPATAAVDGSTAS 907
>UniRef50_Q11BJ4 Cluster: Putative uncharacterized protein
precursor; n=1; Mesorhizobium sp. BNC1|Rep: Putative
uncharacterized protein precursor - Mesorhizobium sp.
(strain BNC1)
Length = 297
Score = 33.5 bits (73), Expect = 3.6
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Frame = +1
Query: 205 YAGSWSPPGASDII-NFSGRVTDVKADDFSSLHLRRVSYVGTRLNLV----LAVPRVSAS 369
+A + PG + I+ N + V A F S LR Y+G + + +A+PR+
Sbjct: 85 HAAEFVSPGLATILTNTQPLIAAVLAFAFLSERLRPSQYIGLGIGFLGIVTVAMPRLG-- 142
Query: 370 VGSAEGEIRIFSRVLRSFASGGLALENVVAEATAS-----VSLADNIIVSDIGAAI 522
+G+ GE+ S ++ A+ GLA+ NV+ + S V++A +++ + AI
Sbjct: 143 IGNGPGELFALSYLI--LAASGLAVSNVLMKTVRSRIDPLVAMAAQLLLGAVPLAI 196
>UniRef50_Q0LR67 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 878
Score = 33.5 bits (73), Expect = 3.6
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -3
Query: 515 APMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE-PTDAETLGTART 339
APM T ++ A AS T S +PP A TR+ + P+ E P A T+ T
Sbjct: 670 APMVSTASVAHAPASAPASHVTAS--TPPPAPARSTRIDVPTPPTQELPATAPTVATPPA 727
Query: 338 KLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAPGGLQEPA*PS 198
+ ++ P ++ EL SSA RP + ++ G A PS
Sbjct: 728 R-AQTPAPPAAQQTPELASSAPRGPQRPPASVPTNGTGLGNSAAPPS 773
>UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Radical SAM
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 364
Score = 33.5 bits (73), Expect = 3.6
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -3
Query: 473 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCR 294
E +A T F R P+ D+ T + P A P D ETL RT LS
Sbjct: 186 ENLALLTDFVRELAPDRVDVTTLSRPGTWPGARPADRETLAAWRTALSAAARPAGGHAVP 245
Query: 293 ELKSSALTSVTRPE 252
+ +LT T P+
Sbjct: 246 AAAAPSLTGRTAPD 259
>UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 679
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 220 SRSQRSRHGGEDQPLSTIHRFH*TSL--RSRCQGCAEN*ARNRHRDVA 83
SR R + GG D+ L+ + F L + RCQ C EN R RH VA
Sbjct: 426 SRKTRKKEGGNDRKLTEKNNFANRILTQQERCQFCFENPTRPRHLVVA 473
>UniRef50_Q4Q1T2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 5609
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 554 IWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE 375
+ R+ L P+V ++ ++ ET+++ +RA+PP+ +D + I AE
Sbjct: 2322 VQRMLLDIPVVPLFSLAREVVRQVMETQSIEGMRPHARAAPPDGRDAESPALTYIDMEAE 2381
Query: 374 PTDAE 360
TD E
Sbjct: 2382 LTDVE 2386
>UniRef50_Q380F3 Cluster: ENSANGP00000027331; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027331 - Anopheles gambiae
str. PEST
Length = 157
Score = 33.5 bits (73), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 19 SRIQSTMKAFIFALALACVSAVPHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLR 195
SR + + F+ A A + P R P + LD ++ L I ELLR DP R
Sbjct: 2 SRFFALVALFVVASNAATIPHQPSRPEALAPEQRATLDEALAQLLENIRELLRTGDPER 60
>UniRef50_Q0H230 Cluster: TMP repeat protein; n=2; unclassified
Myoviridae|Rep: TMP repeat protein - Geobacillus phage
GBSV1
Length = 955
Score = 33.1 bits (72), Expect = 4.7
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 214 SWSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEGEI 393
S S A + F + D+K L S VG + + A P++SA++ + G +
Sbjct: 520 SISKINADPAVKFQKAIGDLKTA-LEPLMSVIASVVGAIASWMSANPQLSATITAIVGAV 578
Query: 394 RIFSRVLRSFASGGLALENVVAEATASVSLADN---IIVSDIGAAITI 528
IFS L + A +++NV+ T + + N + IG AIT+
Sbjct: 579 GIFSGALMALAPILYSIQNVLPIITKMLPMLGNAFKAMTGPIGLAITV 626
>UniRef50_UPI0000F1D904 Cluster: PREDICTED: similar to LOC494811
protein; n=4; Danio rerio|Rep: PREDICTED: similar to
LOC494811 protein - Danio rerio
Length = 841
Score = 32.7 bits (71), Expect = 6.2
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -2
Query: 249 VNDV*CTRRAPGAS--VAVTAERISRSQQF-TDFIEQV*DHDVKDALRIRLEID--IAMW 85
V D +RR P ++ V V R+ + + TDF + D+ DA R+R E++ I W
Sbjct: 691 VTDTHLSRRTPESNRQVVVICTRVDKGNKIITDFTAEPAPEDITDASRLRHEVENLIRQW 750
Query: 84 HS 79
H+
Sbjct: 751 HN 752
>UniRef50_Q1L8C0 Cluster: Novel tub family member protein; n=11;
Clupeocephala|Rep: Novel tub family member protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 556
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 214 SWSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAVPRVSASVGSAEGEI 393
SW+ S ++NF GRVT +F +H V Y+ + V A S +
Sbjct: 481 SWNEQTQSYVLNFHGRVTQASVKNFQIVHPDNVDYIVMQFGRV-ADDVFSMDYSFPMCAL 539
Query: 394 RIFSRVLRSFASGGLALE 447
+ F+ L SF G LA E
Sbjct: 540 QAFAITLSSF-DGKLACE 556
>UniRef50_A6VWU7 Cluster: Secretion protein HlyD family protein;
n=1; Marinomonas sp. MWYL1|Rep: Secretion protein HlyD
family protein - Marinomonas sp. MWYL1
Length = 380
Score = 32.7 bits (71), Expect = 6.2
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 SGRVTDVKADDFSSLH----LRRVSYVGTRLNLVLAVPRVSASVGSAEGEIRIFSRVLRS 420
SG VTD+ D+ SS+H L +V+ V +L L A +++++ + + + S
Sbjct: 60 SGTVTDIMVDNTSSVHESDLLVQVNPVDAKLALEQAEANLASTIRAVRNDFASLEQQKAS 119
Query: 421 FASGGLALENVVAEATASVSLADNIIVSD 507
+ALE + V+L N ++S+
Sbjct: 120 VELARIALEKAQQDYKRRVNLKKNNLISN 148
>UniRef50_A1WNZ9 Cluster: TonB-dependent siderophore receptor; n=2;
Comamonadaceae|Rep: TonB-dependent siderophore receptor
- Verminephrobacter eiseniae (strain EF01-2)
Length = 767
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -3
Query: 551 WRLDLTSPIVIA-APMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAE 375
WRL +A AP++L + +A A +AT S +PP +++R
Sbjct: 60 WRLAAGKAWRLAVAPLALCLAQAAPAQTATETATEASATTPPRLQEVRISADTDNGMGFA 119
Query: 374 PTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 228
P A+T G A + P ++ +++S +T++ + + + +P
Sbjct: 120 PDQAQTAGKAPMRRLETPQSVSVVTREQMESRQITNLQQALQTVAGVSP 168
>UniRef50_UPI000038D615 Cluster: hypothetical protein Npun02005578;
n=2; Nostoc punctiforme PCC 73102|Rep: hypothetical
protein Npun02005578 - Nostoc punctiforme PCC 73102
Length = 70
Score = 32.3 bits (70), Expect = 8.2
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 19 SRIQSTMKAFIFALALACVSAVPHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRR 198
S IQ+ ++ + L L S+ +R+++ + D+V+++ FN +GE+L A D +++
Sbjct: 8 SEIQAILQGCQYTLRLIS-SSQDYRNIESSEYFSTLNDVVLNDAFNILGEVLNAIDDMKQ 66
>UniRef50_A4S431 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 471
Score = 32.3 bits (70), Expect = 8.2
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 482 RETEAVASAT-TFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVPT*LTR 306
R T A + T T +R PP K LR + SPSA+P + + RVPT
Sbjct: 219 RGTRAASRETKTLTRTPPPVPKALR----LIPSPSAKPVKWDVVFDEPKPSGRVPTWFPG 274
Query: 305 RKCRELKSSALTSVTRPEK 249
R R + S++ + + P K
Sbjct: 275 RNARLMASTSSSETSPPSK 293
>UniRef50_A2QTZ0 Cluster: Catalytic activity: Triacylglycerol + H2O
= Diacylglycerol + a Carboxylate; n=4;
Trichocomaceae|Rep: Catalytic activity: Triacylglycerol
+ H2O = Diacylglycerol + a Carboxylate - Aspergillus
niger
Length = 621
Score = 32.3 bits (70), Expect = 8.2
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 208 AGSWSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYVGTRLNLVLAV 351
+G+W P G DI+ F+ RVT++ +++ SL + R + V + L + V
Sbjct: 107 SGAWCPQGTGDILPFTSRVTNI-SENCLSLRVARATGVKIQDKLPVVV 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,310,225
Number of Sequences: 1657284
Number of extensions: 9515182
Number of successful extensions: 32676
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 31363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32640
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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