Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11n12r
         (764 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041691-1|AAH41691.1|  403|Homo sapiens F-box protein 22 protein.     31   4.5  
BC032540-1|AAH32540.1|  403|Homo sapiens F-box protein 22 protein.     31   4.5  
BC020204-1|AAH20204.2|  403|Homo sapiens Unknown (protein for MG...    31   4.5  
AY005144-1|AAF89095.1|  403|Homo sapiens F-box protein FBX22p44 ...    31   4.5  
AK223500-1|BAD97220.1|  403|Homo sapiens F-box only protein 22 i...    31   4.5  
AK024048-1|BAB14798.1|  276|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AF174602-1|AAF04523.1|   81|Homo sapiens F-box protein Fbx22 pro...    31   4.5  

>BC041691-1|AAH41691.1|  403|Homo sapiens F-box protein 22 protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>BC032540-1|AAH32540.1|  403|Homo sapiens F-box protein 22 protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>BC020204-1|AAH20204.2|  403|Homo sapiens Unknown (protein for
           MGC:31799) protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AY005144-1|AAF89095.1|  403|Homo sapiens F-box protein FBX22p44
           protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AK223500-1|BAD97220.1|  403|Homo sapiens F-box only protein 22
           isoform a variant protein.
          Length = 403

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AK024048-1|BAB14798.1|  276|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13986 fis, clone Y79AA1001923, weakly similar to
           Homo sapiens F-box protein Fbx22 (FBX22) gene. ).
          Length = 276

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 17  PRSTFVLSNLAEVVERVLTFLPAKA 41


>AF174602-1|AAF04523.1|   81|Homo sapiens F-box protein Fbx22
           protein.
          Length = 81

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 468 PRSTEIISNVKELISNVLSFLTSKS 542
           PRST ++SN+ E++  VL+FL +K+
Sbjct: 16  PRSTFVLSNLAEVVERVLTFLPAKA 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,166,129
Number of Sequences: 237096
Number of extensions: 1866521
Number of successful extensions: 4360
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4358
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)